RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 KRTAP4-16G5E9R7 235 aaPredicted RBP7.12□□□□□ -1.27
CAPRIN1-213ENST00000533562 J3QQQ9 107 aa7.12□□□□□ -1.27
CAPRIN1-213ENST00000533562 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
CAPRIN1-213ENST00000533562 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
CAPRIN1-213ENST00000533562 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
CAPRIN1-213ENST00000533562 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
CAPRIN1-213ENST00000533562 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
CAPRIN1-213ENST00000533562 SLC25A20O43772 301 aa7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 ANKRD29Q8N6D5 301 aa7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 DAND5Q8N907 189 aa7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 Q8NBF4 154 aa7.1□□□□□ -1.27
CAPRIN1-213ENST00000533562 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 H3BT86 120 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 SPINK1P00995 79 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 OR13C6PQ8NH95 151 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
CAPRIN1-213ENST00000533562 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
CAPRIN1-213ENST00000533562 ZNF815PA8K554 130 aa7.08□□□□□ -1.28
CAPRIN1-213ENST00000533562 NDUFC2O95298 119 aa7.08□□□□□ -1.28
CAPRIN1-213ENST00000533562 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
CAPRIN1-213ENST00000533562 GAGE2AQ6NT46 116 aa7.08□□□□□ -1.28
CAPRIN1-213ENST00000533562 J3KT08 172 aa7.07□□□□□ -1.28
CAPRIN1-213ENST00000533562 TCL1BO95988 128 aa7.06□□□□□ -1.28
CAPRIN1-213ENST00000533562 COX6CP09669 75 aa7.06□□□□□ -1.28
CAPRIN1-213ENST00000533562 Q6ZRX8 168 aa7.06□□□□□ -1.28
CAPRIN1-213ENST00000533562 SSBP3-AS1Q7Z2R9 100 aa7.06□□□□□ -1.28
CAPRIN1-213ENST00000533562 CCDC179H3BU77 68 aa7.05□□□□□ -1.28
CAPRIN1-213ENST00000533562 UQCRQO14949 82 aa7.05□□□□□ -1.28
CAPRIN1-213ENST00000533562 ERC2-IT1O76042 136 aa7.05□□□□□ -1.28
CAPRIN1-213ENST00000533562 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
CAPRIN1-213ENST00000533562 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
CAPRIN1-213ENST00000533562 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
CAPRIN1-213ENST00000533562 Q9BRP9 147 aa7.04□□□□□ -1.28
CAPRIN1-213ENST00000533562 TRAV23DV6A0A075B6W5 121 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 C9JAW5 83 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 CFC1P0CG37 223 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 MOBPQ13875 183 aa7.03□□□□□ -1.28
CAPRIN1-213ENST00000533562 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
CAPRIN1-213ENST00000533562 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
CAPRIN1-213ENST00000533562 ADAMTSL4-AS1Q5T5F5 129 aa7.02□□□□□ -1.29
CAPRIN1-213ENST00000533562 TTTY13Q9BZ97 58 aa7.02□□□□□ -1.29
CAPRIN1-213ENST00000533562 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
CAPRIN1-213ENST00000533562 NPC2P61916 151 aa7.01□□□□□ -1.29
CAPRIN1-213ENST00000533562 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
CAPRIN1-213ENST00000533562 SOSTDC1Q6X4U4 206 aa7□□□□□ -1.29
CAPRIN1-213ENST00000533562 C9orf153Q5TBE3 101 aa6.99□□□□□ -1.29
CAPRIN1-213ENST00000533562 LINC00643Q86TS7 51 aa6.99□□□□□ -1.29
CAPRIN1-213ENST00000533562 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
CAPRIN1-213ENST00000533562 Q8N377 158 aa6.98□□□□□ -1.29
CAPRIN1-213ENST00000533562 ATOX1O00244 68 aa6.97□□□□□ -1.29
CAPRIN1-213ENST00000533562 TIMM17BO60830 172 aa6.97□□□□□ -1.29
CAPRIN1-213ENST00000533562 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
CAPRIN1-213ENST00000533562 TMEM258P61165 79 aa6.96□□□□□ -1.3
CAPRIN1-213ENST00000533562 Q1RN00 199 aa6.96□□□□□ -1.3
CAPRIN1-213ENST00000533562 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
CAPRIN1-213ENST00000533562 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
CAPRIN1-213ENST00000533562 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
CAPRIN1-213ENST00000533562 LITAFQ99732 161 aa6.95□□□□□ -1.3
CAPRIN1-213ENST00000533562 DHRS4-AS1Q9P1J3 65 aa6.95□□□□□ -1.3
CAPRIN1-213ENST00000533562 COX7CP15954 63 aa6.94□□□□□ -1.3
CAPRIN1-213ENST00000533562 A4D1N5 150 aa6.92□□□□□ -1.3
CAPRIN1-213ENST00000533562 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
CAPRIN1-213ENST00000533562 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 LST1O00453 97 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 TRACP01848 142 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 SPRR1BP22528 89 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
CAPRIN1-213ENST00000533562 TEX49A0A1B0GTD5 131 aa6.9□□□□□ -1.3
CAPRIN1-213ENST00000533562 COX7BP24311 80 aa6.9□□□□□ -1.3
CAPRIN1-213ENST00000533562 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
CAPRIN1-213ENST00000533562 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
CAPRIN1-213ENST00000533562 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
CAPRIN1-213ENST00000533562 TRIAP1O43715 76 aa6.88□□□□□ -1.31
CAPRIN1-213ENST00000533562 XP32Q5T750 250 aa6.88□□□□□ -1.31
CAPRIN1-213ENST00000533562 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
CAPRIN1-213ENST00000533562 LINC01547P58512 204 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-213ENST00000533562 HRCT1Q6UXD1 115 aa6.87□□□□□ -1.31
CAPRIN1-213ENST00000533562 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
CAPRIN1-213ENST00000533562 HIST1H4AP62805 103 aaKnown RBP6.86□□□□□ -1.31
CAPRIN1-213ENST00000533562 DEFB105AQ8NG35 78 aa6.86□□□□□ -1.31
CAPRIN1-213ENST00000533562 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
CAPRIN1-213ENST00000533562 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
CAPRIN1-213ENST00000533562 CD164Q04900 197 aa6.84□□□□□ -1.31
CAPRIN1-213ENST00000533562 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
CAPRIN1-213ENST00000533562 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
CAPRIN1-213ENST00000533562 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
CAPRIN1-213ENST00000533562 H7C2G1 150 aa6.81□□□□□ -1.32
CAPRIN1-213ENST00000533562 Q6JHZ5 121 aa6.81□□□□□ -1.32
CAPRIN1-213ENST00000533562 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
CAPRIN1-213ENST00000533562 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
CAPRIN1-213ENST00000533562 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
CAPRIN1-213ENST00000533562 Q5XG85 94 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms