RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC25A20O43772 301 aa5.03□□□□□ -1.6
COPB1-210ENST00000533533 Q8NBF4 154 aa5.03□□□□□ -1.6
COPB1-210ENST00000533533 RETNLBQ9BQ08 111 aa5.03□□□□□ -1.6
COPB1-210ENST00000533533 Q1RN00 199 aa5.02□□□□□ -1.61
COPB1-210ENST00000533533 CEND1Q8N111 149 aa5.02□□□□□ -1.61
COPB1-210ENST00000533533 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
COPB1-210ENST00000533533 NHP2Q9NX24 153 aaKnown RBP5.02□□□□□ -1.61
COPB1-210ENST00000533533 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
COPB1-210ENST00000533533 CFC1P0CG37 223 aa5.01□□□□□ -1.61
COPB1-210ENST00000533533 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
COPB1-210ENST00000533533 UQCR10Q9UDW1 63 aa5.01□□□□□ -1.61
COPB1-210ENST00000533533 LAMTOR3Q9UHA4 124 aa5.01□□□□□ -1.61
COPB1-210ENST00000533533 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
COPB1-210ENST00000533533 HSD52Q0P140 79 aa5□□□□□ -1.61
COPB1-210ENST00000533533 SPAG11AQ6PDA7 123 aa5□□□□□ -1.61
COPB1-210ENST00000533533 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 TEX49A0A1B0GTD5 131 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 FXYD2P54710 66 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 BVES-AS1Q5T3Y7 98 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 PRO1933Q9H354 126 aa4.99□□□□□ -1.61
COPB1-210ENST00000533533 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 hADV29S1A0JD25 119 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 SPRR1BP22528 89 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 CTAG1AP78358 180 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 LINC00575Q6W349 94 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
COPB1-210ENST00000533533 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
COPB1-210ENST00000533533 Q6ZQY7 126 aa4.97□□□□□ -1.61
COPB1-210ENST00000533533 K7ERJ3 54 aa4.96□□□□□ -1.62
COPB1-210ENST00000533533 SNCGO76070 127 aa4.96□□□□□ -1.62
COPB1-210ENST00000533533 SPINK1P00995 79 aa4.96□□□□□ -1.62
COPB1-210ENST00000533533 IGLV5-48A0A075B6I7 105 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 F8WEM9 126 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 H3BS24 57 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 SMIM6P0DI80 62 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 PSMB2P49721 201 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
COPB1-210ENST00000533533 Q8N377 158 aa4.95□□□□□ -1.62
COPB1-210ENST00000533533 H0YGX0 51 aa4.94□□□□□ -1.62
COPB1-210ENST00000533533 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
COPB1-210ENST00000533533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
COPB1-210ENST00000533533 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
COPB1-210ENST00000533533 SNHG12Q9BXW3 62 aa4.93□□□□□ -1.62
COPB1-210ENST00000533533 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
COPB1-210ENST00000533533 TRIAP1O43715 76 aa4.92□□□□□ -1.62
COPB1-210ENST00000533533 LOC105371267A0A1B0GV96 52 aa4.91□□□□□ -1.62
COPB1-210ENST00000533533 COX6CP09669 75 aa4.91□□□□□ -1.62
COPB1-210ENST00000533533 FP248Q71RG6 208 aaPredicted RBP4.91□□□□□ -1.62
COPB1-210ENST00000533533 CLEC2BQ92478 149 aa4.91□□□□□ -1.62
COPB1-210ENST00000533533 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
COPB1-210ENST00000533533 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
COPB1-210ENST00000533533 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
COPB1-210ENST00000533533 M0R143 59 aa4.9□□□□□ -1.63
COPB1-210ENST00000533533 SCGB1C2P0DMR2 95 aa4.9□□□□□ -1.63
COPB1-210ENST00000533533 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
COPB1-210ENST00000533533 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.63
COPB1-210ENST00000533533 DNAL4O96015 105 aa4.89□□□□□ -1.63
COPB1-210ENST00000533533 FABP2P12104 132 aa4.89□□□□□ -1.63
COPB1-210ENST00000533533 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
COPB1-210ENST00000533533 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
COPB1-210ENST00000533533 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
COPB1-210ENST00000533533 A0A1B0GX51 115 aa4.88□□□□□ -1.63
COPB1-210ENST00000533533 BATFQ16520 125 aa4.88□□□□□ -1.63
COPB1-210ENST00000533533 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
COPB1-210ENST00000533533 PPDPFLQ8WWR9 84 aa4.88□□□□□ -1.63
COPB1-210ENST00000533533 H3BUT2 72 aa4.87□□□□□ -1.63
COPB1-210ENST00000533533 CD164Q04900 197 aa4.87□□□□□ -1.63
COPB1-210ENST00000533533 Q6JHZ5 121 aa4.87□□□□□ -1.63
COPB1-210ENST00000533533 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
COPB1-210ENST00000533533 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
COPB1-210ENST00000533533 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
COPB1-210ENST00000533533 IGFL1Q6UW32 110 aa4.86□□□□□ -1.63
COPB1-210ENST00000533533 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
COPB1-210ENST00000533533 A0A1B0GV72 72 aa4.85□□□□□ -1.63
COPB1-210ENST00000533533 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
COPB1-210ENST00000533533 NAA38Q9BRA0 125 aaKnown RBP4.85□□□□□ -1.63
COPB1-210ENST00000533533 ORMDL1Q9P0S3 153 aa4.85□□□□□ -1.63
COPB1-210ENST00000533533 TCL1BO95988 128 aa4.84□□□□□ -1.63
COPB1-210ENST00000533533 IGLV8-61A0A075B6I0 122 aa4.83□□□□□ -1.64
COPB1-210ENST00000533533 H3BMG7 143 aa4.83□□□□□ -1.64
COPB1-210ENST00000533533 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
COPB1-210ENST00000533533 H3BQ85 93 aa4.81□□□□□ -1.64
COPB1-210ENST00000533533 TMEM256-PLSCR3K7ERE1 68 aa4.81□□□□□ -1.64
COPB1-210ENST00000533533 LST1O00453 97 aa4.81□□□□□ -1.64
COPB1-210ENST00000533533 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
COPB1-210ENST00000533533 TRACP01848 142 aa4.8□□□□□ -1.64
COPB1-210ENST00000533533 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
COPB1-210ENST00000533533 Q5XG85 94 aa4.8□□□□□ -1.64
COPB1-210ENST00000533533 ATXN8Q156A1 80 aa4.79□□□□□ -1.64
COPB1-210ENST00000533533 ANKRD29Q8N6D5 301 aa4.79□□□□□ -1.64
COPB1-210ENST00000533533 BAALC-AS2P0C853 105 aa4.78□□□□□ -1.64
COPB1-210ENST00000533533 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
COPB1-210ENST00000533533 TEN1Q86WV5 123 aa4.78□□□□□ -1.64
COPB1-210ENST00000533533 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
COPB1-210ENST00000533533 A0A087WSZ3 146 aa4.77□□□□□ -1.65
COPB1-210ENST00000533533 UBE2V1Q13404 147 aa4.77□□□□□ -1.65
COPB1-210ENST00000533533 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
COPB1-210ENST00000533533 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
COPB1-210ENST00000533533 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms