RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LST1O00453 97 aa8.87□□□□□ -0.99
CPSF1-210ENST00000532935 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
CPSF1-210ENST00000532935 Q8NBF4 154 aa8.86□□□□□ -0.99
CPSF1-210ENST00000532935 A0A1B0GX51 115 aa8.85□□□□□ -0.99
CPSF1-210ENST00000532935 TRACP01848 142 aa8.85□□□□□ -0.99
CPSF1-210ENST00000532935 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
CPSF1-210ENST00000532935 IGLV9-49A0A0B4J1Y8 123 aa8.84□□□□□ -0.99
CPSF1-210ENST00000532935 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
CPSF1-210ENST00000532935 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
CPSF1-210ENST00000532935 ST20-AS1Q8NBB2 130 aa8.84□□□□□ -0.99
CPSF1-210ENST00000532935 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 SNCGO76070 127 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 COX7BP24311 80 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
CPSF1-210ENST00000532935 MOBPQ13875 183 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 PRO0461Q9UI25 63 aa8.83□□□□□ -1
CPSF1-210ENST00000532935 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CPSF1-210ENST00000532935 CLEC2BQ92478 149 aa8.8□□□□□ -1
CPSF1-210ENST00000532935 H3BT86 120 aa8.79□□□□□ -1
CPSF1-210ENST00000532935 C9JAW5 83 aa8.78□□□□□ -1
CPSF1-210ENST00000532935 SLC25A20O43772 301 aa8.78□□□□□ -1
CPSF1-210ENST00000532935 SPINK1P00995 79 aa8.78□□□□□ -1
CPSF1-210ENST00000532935 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
CPSF1-210ENST00000532935 SPRR1BP22528 89 aa8.77□□□□□ -1.01
CPSF1-210ENST00000532935 ANKRD29Q8N6D5 301 aa8.77□□□□□ -1.01
CPSF1-210ENST00000532935 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
CPSF1-210ENST00000532935 DNAL4O96015 105 aa8.76□□□□□ -1.01
CPSF1-210ENST00000532935 H3BQ85 93 aa8.75□□□□□ -1.01
CPSF1-210ENST00000532935 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
CPSF1-210ENST00000532935 FAM218AQ96MZ4 157 aa8.75□□□□□ -1.01
CPSF1-210ENST00000532935 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
CPSF1-210ENST00000532935 GHRHP01286 108 aa8.73□□□□□ -1.01
CPSF1-210ENST00000532935 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
CPSF1-210ENST00000532935 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
CPSF1-210ENST00000532935 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
CPSF1-210ENST00000532935 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
CPSF1-210ENST00000532935 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
CPSF1-210ENST00000532935 LAMTOR3Q9UHA4 124 aa8.72□□□□□ -1.01
CPSF1-210ENST00000532935 hADV29S1A0JD25 119 aa8.71□□□□□ -1.02
CPSF1-210ENST00000532935 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
CPSF1-210ENST00000532935 BAALC-AS2P0C853 105 aa8.7□□□□□ -1.02
CPSF1-210ENST00000532935 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
CPSF1-210ENST00000532935 MUC2Q02817 5179 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 J3QR89 54 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 K7ERU9 68 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 OCIAD2Q56VL3 154 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 Q8N377 158 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 MTURNQ8N3F0 131 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 ORMDL1Q9P0S3 153 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 MUC17Q685J3 4493 aa8.69□□□□□ -1.02
CPSF1-210ENST00000532935 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
CPSF1-210ENST00000532935 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-210ENST00000532935 PPDPFLQ8WWR9 84 aa8.68□□□□□ -1.02
CPSF1-210ENST00000532935 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
CPSF1-210ENST00000532935 TMEM256-PLSCR3K7ERE1 68 aa8.67□□□□□ -1.02
CPSF1-210ENST00000532935 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.67□□□□□ -1.02
CPSF1-210ENST00000532935 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
CPSF1-210ENST00000532935 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
CPSF1-210ENST00000532935 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
CPSF1-210ENST00000532935 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
CPSF1-210ENST00000532935 JMJD7-PLA2G4BH0Y9G9 81 aa8.6□□□□□ -1.03
CPSF1-210ENST00000532935 CD164Q04900 197 aa8.6□□□□□ -1.03
CPSF1-210ENST00000532935 OBSCN-AS1Q96MR7 158 aa8.6□□□□□ -1.03
CPSF1-210ENST00000532935 Q6ZQY7 126 aa8.59□□□□□ -1.03
CPSF1-210ENST00000532935 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
CPSF1-210ENST00000532935 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
CPSF1-210ENST00000532935 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
CPSF1-210ENST00000532935 F8WEM9 126 aa8.54□□□□□ -1.04
CPSF1-210ENST00000532935 ACYP1P07311 99 aa8.53□□□□□ -1.04
CPSF1-210ENST00000532935 PDE6GP18545 87 aa8.53□□□□□ -1.04
CPSF1-210ENST00000532935 Q5XG85 94 aa8.52□□□□□ -1.05
CPSF1-210ENST00000532935 RBM3P98179 157 aaKnown RBP8.51□□□□□ -1.05
CPSF1-210ENST00000532935 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
CPSF1-210ENST00000532935 NDUFV3P56181 108 aaKnown RBP8.49□□□□□ -1.05
CPSF1-210ENST00000532935 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
CPSF1-210ENST00000532935 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
CPSF1-210ENST00000532935 Q6JHZ5 121 aa8.48□□□□□ -1.05
CPSF1-210ENST00000532935 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
CPSF1-210ENST00000532935 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
CPSF1-210ENST00000532935 DSCR8Q96T75 97 aa8.47□□□□□ -1.05
CPSF1-210ENST00000532935 CCKP06307 115 aa8.46□□□□□ -1.06
CPSF1-210ENST00000532935 XP32Q5T750 250 aa8.46□□□□□ -1.06
CPSF1-210ENST00000532935 C1orf195Q5TG92 126 aa8.46□□□□□ -1.06
CPSF1-210ENST00000532935 IGFL1Q6UW32 110 aa8.46□□□□□ -1.06
CPSF1-210ENST00000532935 C14orf132Q9NPU4 83 aa8.46□□□□□ -1.06
CPSF1-210ENST00000532935 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
CPSF1-210ENST00000532935 VPS25Q9BRG1 176 aa8.45□□□□□ -1.06
CPSF1-210ENST00000532935 TRBV7-4A0A0J9YYF1 115 aa8.44□□□□□ -1.06
CPSF1-210ENST00000532935 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
CPSF1-210ENST00000532935 A0A1B0GW54 56 aa8.42□□□□□ -1.06
CPSF1-210ENST00000532935 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
CPSF1-210ENST00000532935 Q6ZQT0 140 aa8.42□□□□□ -1.06
CPSF1-210ENST00000532935 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
CPSF1-210ENST00000532935 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
CPSF1-210ENST00000532935 A0A1B0GV72 72 aa8.34□□□□□ -1.07
CPSF1-210ENST00000532935 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
CPSF1-210ENST00000532935 Q6Q795 121 aa8.33□□□□□ -1.08
CPSF1-210ENST00000532935 PCOTHQ58A44 107 aa8.31□□□□□ -1.08
CPSF1-210ENST00000532935 UBL5Q9BZL1 73 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms