RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678		A0A0B4J2C4	111 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678		A0A1B0GWB2	263 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	CFC1B	P0CG36	223 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	CFC1	P0CG37	223 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	FXYD2	P54710	66 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	GAGE2A	Q6NT46	116 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	RAB37	Q96AX2	223 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	PRO1933	Q9H354	126 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	DHRS4-AS1	Q9P1J3	65 aa		4.73	□□□□□ -1.65
PUM1-223	ENST00000532678	TRBV7-6	A0A0J9YX20	115 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678		H7C2G1	150 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678	KRTAP13-2	Q52LG2	175 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678	LINC00483	Q53H64	154 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678	ST20-AS1	Q8NBB2	130 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678	TYMSOS	Q8TAI1	123 aa		4.72	□□□□□ -1.65
PUM1-223	ENST00000532678	PRR4	Q16378	134 aa		4.71	□□□□□ -1.66
PUM1-223	ENST00000532678	C3orf22	Q8N5N4	141 aa		4.71	□□□□□ -1.66
PUM1-223	ENST00000532678	VAMP3	Q15836	100 aa		4.7	□□□□□ -1.66
PUM1-223	ENST00000532678		Q1RN00	199 aa		4.7	□□□□□ -1.66
PUM1-223	ENST00000532678		K7ERJ3	54 aa		4.69	□□□□□ -1.66
PUM1-223	ENST00000532678	NHP2	Q9NX24	153 aa	Known RBP	4.69	□□□□□ -1.66
PUM1-223	ENST00000532678	IGLV9-49	A0A0B4J1Y8	123 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	SLC25A20	O43772	301 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	TSPAN13	O95857	204 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	MOBP	Q13875	183 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	BVES-AS1	Q5T3Y7	98 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	PRO1854	Q9UHT4	67 aa		4.68	□□□□□ -1.66
PUM1-223	ENST00000532678	TSTD3	H0UI37	97 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	SPRR1B	P22528	89 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	C9orf153	Q5TBE3	101 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	LINC00575	Q6W349	94 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	LINC00304	Q8N9R0	145 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	DEFB105A	Q8NG35	78 aa		4.67	□□□□□ -1.66
PUM1-223	ENST00000532678	hADV29S1	A0JD25	119 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678	CTAG1A	P78358	180 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678		Q8NBF4	154 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678	KRTAP9-8	Q9BYQ0	159 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678	MUC2	Q02817	5179 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678	MUC17	Q685J3	4493 aa		4.66	□□□□□ -1.66
PUM1-223	ENST00000532678	IGLV5-48	A0A075B6I7	105 aa		4.65	□□□□□ -1.67
PUM1-223	ENST00000532678	TEX49	A0A1B0GTD5	131 aa		4.65	□□□□□ -1.67
PUM1-223	ENST00000532678		M0R143	59 aa		4.65	□□□□□ -1.67
PUM1-223	ENST00000532678	LINC01547	P58512	204 aa	Predicted RBP	4.65	□□□□□ -1.67
PUM1-223	ENST00000532678		Q6ZQY7	126 aa		4.65	□□□□□ -1.67
PUM1-223	ENST00000532678	PSMB2	P49721	201 aa		4.64	□□□□□ -1.67
PUM1-223	ENST00000532678	FAM218A	Q96MZ4	157 aa		4.64	□□□□□ -1.67
PUM1-223	ENST00000532678	LAMTOR3	Q9UHA4	124 aa		4.64	□□□□□ -1.67
PUM1-223	ENST00000532678		A0A0A0MQY5	61 aa		4.63	□□□□□ -1.67
PUM1-223	ENST00000532678		H0YGX0	51 aa		4.63	□□□□□ -1.67
PUM1-223	ENST00000532678	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.63	□□□□□ -1.67
PUM1-223	ENST00000532678	SMIM29	Q86T20	159 aa		4.63	□□□□□ -1.67
PUM1-223	ENST00000532678	RETNLB	Q9BQ08	111 aa		4.63	□□□□□ -1.67
PUM1-223	ENST00000532678	FAT4	Q6V0I7	4981 aa		4.62	□□□□□ -1.67
PUM1-223	ENST00000532678	IGKV2D-30	A0A075B6S6	120 aa		4.62	□□□□□ -1.67
PUM1-223	ENST00000532678	SSBP3-AS1	Q7Z2R9	100 aa		4.62	□□□□□ -1.67
PUM1-223	ENST00000532678		Q8N377	158 aa		4.62	□□□□□ -1.67
PUM1-223	ENST00000532678	SPAG11A	Q6PDA7	123 aa		4.61	□□□□□ -1.67
PUM1-223	ENST00000532678	CLEC2B	Q92478	149 aa		4.61	□□□□□ -1.67
PUM1-223	ENST00000532678		A0A1B0GX51	115 aa		4.6	□□□□□ -1.67
PUM1-223	ENST00000532678		F8WEM9	126 aa		4.6	□□□□□ -1.67
PUM1-223	ENST00000532678	SNCG	O76070	127 aa		4.6	□□□□□ -1.67
PUM1-223	ENST00000532678	COX6C	P09669	75 aa		4.6	□□□□□ -1.67
PUM1-223	ENST00000532678	BATF	Q16520	125 aa		4.6	□□□□□ -1.67
PUM1-223	ENST00000532678	SPINK1	P00995	79 aa		4.59	□□□□□ -1.67
PUM1-223	ENST00000532678	PPDPFL	Q8WWR9	84 aa		4.59	□□□□□ -1.67
PUM1-223	ENST00000532678	DNAL4	O96015	105 aa		4.58	□□□□□ -1.68
PUM1-223	ENST00000532678	OCIAD2	Q56VL3	154 aa		4.58	□□□□□ -1.68
PUM1-223	ENST00000532678	HRCT1	Q6UXD1	115 aa		4.58	□□□□□ -1.68
PUM1-223	ENST00000532678	NAA38	Q9BRA0	125 aa	Known RBP	4.58	□□□□□ -1.68
PUM1-223	ENST00000532678		A0A0G2JQZ4	141 aa		4.57	□□□□□ -1.68
PUM1-223	ENST00000532678	SCGB1C2	P0DMR2	95 aa		4.57	□□□□□ -1.68
PUM1-223	ENST00000532678	RPS29	P62273	56 aa	Known RBP	4.57	□□□□□ -1.68
PUM1-223	ENST00000532678	SNHG12	Q9BXW3	62 aa		4.57	□□□□□ -1.68
PUM1-223	ENST00000532678	IGLV8-61	A0A075B6I0	122 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678		A0A0U1RQV1	116 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678		H3BUT2	72 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678	LST1	O00453	97 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678	FABP2	P12104	132 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678	ORMDL1	Q9P0S3	153 aa		4.55	□□□□□ -1.68
PUM1-223	ENST00000532678	TRAC	P01848	142 aa		4.54	□□□□□ -1.68
PUM1-223	ENST00000532678	NDUFV3	P56181	108 aa	Known RBP	4.54	□□□□□ -1.68
PUM1-223	ENST00000532678	CD164	Q04900	197 aa		4.54	□□□□□ -1.68
PUM1-223	ENST00000532678		Q6JHZ5	121 aa		4.54	□□□□□ -1.68
PUM1-223	ENST00000532678	IGFL1	Q6UW32	110 aa		4.54	□□□□□ -1.68
PUM1-223	ENST00000532678	LIMD2	Q9BT23	127 aa		4.54	□□□□□ -1.68
PUM1-223	ENST00000532678	LYRM7	Q5U5X0	104 aa		4.53	□□□□□ -1.68
PUM1-223	ENST00000532678	IGLV7-46	A0A075B6I9	117 aa		4.52	□□□□□ -1.69
PUM1-223	ENST00000532678		A0A1B0GV72	72 aa		4.52	□□□□□ -1.69
PUM1-223	ENST00000532678		H3BQ85	93 aa		4.52	□□□□□ -1.69
PUM1-223	ENST00000532678	TCL1B	O95988	128 aa		4.52	□□□□□ -1.69
PUM1-223	ENST00000532678	ATXN8	Q156A1	80 aa		4.52	□□□□□ -1.69
PUM1-223	ENST00000532678	FP248	Q71RG6	208 aa	Predicted RBP	4.52	□□□□□ -1.69
PUM1-223	ENST00000532678		H3BMG7	143 aa		4.51	□□□□□ -1.69
PUM1-223	ENST00000532678	TMEM256-PLSCR3	K7ERE1	68 aa		4.51	□□□□□ -1.69
PUM1-223	ENST00000532678	TAX1BP3	O14907	124 aa		4.51	□□□□□ -1.69
PUM1-223	ENST00000532678	TPRXL	Q17RH7	258 aa		4.51	□□□□□ -1.69
PUM1-223	ENST00000532678	TRBV7-7	A0A0K0K1E9	115 aa		4.5	□□□□□ -1.69
PUM1-223	ENST00000532678	PCP4L1	A6NKN8	68 aa		4.5	□□□□□ -1.69
PUM1-223	ENST00000532678		A0A1W2PPM0	123 aa		4.49	□□□□□ -1.69
PUM1-223	ENST00000532678	UBE2V1	Q13404	147 aa		4.49	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms