RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 MAP1AP78559 2803 aaPredicted RBP2.43□□□□□ -2.02
CTR9-205ENST00000529898 A6NDX4 124 aa2.43□□□□□ -2.02
CTR9-205ENST00000529898 P0C880 135 aa2.43□□□□□ -2.02
CTR9-205ENST00000529898 Q8N9L7 120 aa2.43□□□□□ -2.02
CTR9-205ENST00000529898 SPTAN1Q13813 2472 aaKnown RBP2.43□□□□□ -2.02
CTR9-205ENST00000529898 ITPR1Q14643 2758 aa2.42□□□□□ -2.02
CTR9-205ENST00000529898 NBASA2RRP1 2371 aa2.42□□□□□ -2.02
CTR9-205ENST00000529898 DEFB1P60022 68 aa2.42□□□□□ -2.02
CTR9-205ENST00000529898 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CTR9-205ENST00000529898 ZANQ9Y493 2812 aa2.42□□□□□ -2.02
CTR9-205ENST00000529898 PTPRZ1P23471 2315 aaPredicted RBP2.42□□□□□ -2.02
CTR9-205ENST00000529898 AKAP6Q13023 2319 aa2.42□□□□□ -2.02
CTR9-205ENST00000529898 RIF1Q5UIP0 2472 aaKnown RBP2.41□□□□□ -2.02
CTR9-205ENST00000529898 MXRA5Q9NR99 2828 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 G3V318 75 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 MINOS1Q5TGZ0 78 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 Q5W150 140 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 MINOS1-NBL1R4GNA1 71 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 SPTA1P02549 2419 aa2.41□□□□□ -2.02
CTR9-205ENST00000529898 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.02
CTR9-205ENST00000529898 IGKV3-7A0A075B6H7 116 aa2.4□□□□□ -2.03
CTR9-205ENST00000529898 IGLV8-61A0A075B6I0 122 aa2.4□□□□□ -2.03
CTR9-205ENST00000529898 A0A1B0GU69 56 aa2.4□□□□□ -2.03
CTR9-205ENST00000529898 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
CTR9-205ENST00000529898 C5orf56Q8N8D9 126 aa2.4□□□□□ -2.03
CTR9-205ENST00000529898 UTP20O75691 2785 aaKnown RBP2.39□□□□□ -2.03
CTR9-205ENST00000529898 MUC6Q6W4X9 2439 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 IGF2RP11717 2491 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 NBPF19A0A087WUL8 3843 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 ACYP2P14621 99 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 DEFB123Q8N688 67 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 DEFB104AQ8WTQ1 72 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
CTR9-205ENST00000529898 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
CTR9-205ENST00000529898 K7EQZ3 153 aa2.38□□□□□ -2.03
CTR9-205ENST00000529898 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
CTR9-205ENST00000529898 HRES1P13985 223 aa2.38□□□□□ -2.03
CTR9-205ENST00000529898 TOMM7Q9P0U1 55 aa2.38□□□□□ -2.03
CTR9-205ENST00000529898 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 ANK3Q12955 4377 aaKnown RBP2.37□□□□□ -2.03
CTR9-205ENST00000529898 GVQW2A0A096LPI5 108 aaPredicted RBP2.37□□□□□ -2.03
CTR9-205ENST00000529898 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 A8MUU9 505 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 H3BUA1 57 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 ANGP03950 147 aaKnown RBP2.37□□□□□ -2.03
CTR9-205ENST00000529898 PRB1P04280 392 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 C4orf3Q8WVX3 66 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 CSPG4Q6UVK1 2322 aa2.37□□□□□ -2.03
CTR9-205ENST00000529898 SETXQ7Z333 2677 aaKnown RBP2.37□□□□□ -2.03
CTR9-205ENST00000529898 NIPBLQ6KC79 2804 aaeCLIP2.36□□□□□ -2.03
CTR9-205ENST00000529898 FLNCQ14315 2725 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 CHD6Q8TD26 2715 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 RPL37AP8A6NKH3 93 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 A8MTW9 85 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 PRB2P02812 416 aaPredicted RBP2.36□□□□□ -2.03
CTR9-205ENST00000529898 IGLV7-43P04211 117 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 TYMSOSQ8TAI1 123 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 LINC00472Q9H8W2 130 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 ANAPC11Q9NYG5 84 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 DHRS4-AS1Q9P1J3 65 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 FBN2P35556 2912 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 CFAP46Q8IYW2 2715 aa2.36□□□□□ -2.03
CTR9-205ENST00000529898 ANKRD17O75179 2603 aaKnown RBP2.36□□□□□ -2.03
CTR9-205ENST00000529898 A0A1B0GVX0 72 aa2.35□□□□□ -2.03
CTR9-205ENST00000529898 DEFB131AP59861 70 aa2.35□□□□□ -2.03
CTR9-205ENST00000529898 USMG5Q96IX5 58 aa2.35□□□□□ -2.03
CTR9-205ENST00000529898 RHPN1-AS1Q9BWJ2 59 aa2.35□□□□□ -2.03
CTR9-205ENST00000529898 NF1P21359 2839 aa2.34□□□□□ -2.03
CTR9-205ENST00000529898 PANO1I0J062 215 aa2.34□□□□□ -2.03
CTR9-205ENST00000529898 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
CTR9-205ENST00000529898 SPTBN4Q9H254 2564 aa2.34□□□□□ -2.04
CTR9-205ENST00000529898 IGKV2-24A0A0C4DH68 120 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 LY6EQ16553 131 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 SPINK13Q1W4C9 94 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 C10orf99Q6UWK7 81 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 WNK1Q9H4A3 2382 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 TEX15Q9BXT5 2789 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 NCOR2Q9Y618 2525 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 CHD8Q9HCK8 2581 aa2.33□□□□□ -2.04
CTR9-205ENST00000529898 ZNF469Q96JG9 3925 aaPredicted RBP2.33□□□□□ -2.04
CTR9-205ENST00000529898 APCP25054 2843 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 USP9XQ93008 2570 aaPredicted RBP2.32□□□□□ -2.04
CTR9-205ENST00000529898 A0A087WTM6 91 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 H3BUX3 64 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 WFDC13Q8IUB5 93 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 JMJD1CQ15652 2540 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 CENPEQ02224 2701 aa2.32□□□□□ -2.04
CTR9-205ENST00000529898 SPG11Q96JI7 2443 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 MYO9AB2RTY4 2548 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 INSP01308 110 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 WFDC10BQ8IUB3 73 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 CCL19Q99731 98 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 C6orf48Q9UBA6 75 aa2.31□□□□□ -2.04
CTR9-205ENST00000529898 PTPN13Q12923 2485 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms