RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
TSPAN4-218ENST00000529566 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
TSPAN4-218ENST00000529566 CD164Q04900 197 aa9.05□□□□□ -0.96
TSPAN4-218ENST00000529566 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
TSPAN4-218ENST00000529566 H0YGX0 51 aa9.04□□□□□ -0.96
TSPAN4-218ENST00000529566 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
TSPAN4-218ENST00000529566 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
TSPAN4-218ENST00000529566 MUC2Q02817 5179 aa9.02□□□□□ -0.97
TSPAN4-218ENST00000529566 MUC17Q685J3 4493 aa9.01□□□□□ -0.97
TSPAN4-218ENST00000529566 IGLV8-61A0A075B6I0 122 aa9.01□□□□□ -0.97
TSPAN4-218ENST00000529566 K7ERJ3 54 aa9□□□□□ -0.97
TSPAN4-218ENST00000529566 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
TSPAN4-218ENST00000529566 CDIP1Q9H305 208 aa9□□□□□ -0.97
TSPAN4-218ENST00000529566 TRIAP1O43715 76 aa8.99□□□□□ -0.97
TSPAN4-218ENST00000529566 Q5XG85 94 aa8.99□□□□□ -0.97
TSPAN4-218ENST00000529566 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
TSPAN4-218ENST00000529566 F8WEM9 126 aa8.97□□□□□ -0.97
TSPAN4-218ENST00000529566 OCIAD2Q56VL3 154 aa8.97□□□□□ -0.97
TSPAN4-218ENST00000529566 A0A1B0GX51 115 aa8.96□□□□□ -0.98
TSPAN4-218ENST00000529566 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
TSPAN4-218ENST00000529566 Q6JHZ5 121 aa8.95□□□□□ -0.98
TSPAN4-218ENST00000529566 IGFL1Q6UW32 110 aa8.95□□□□□ -0.98
TSPAN4-218ENST00000529566 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
TSPAN4-218ENST00000529566 SNCGO76070 127 aa8.94□□□□□ -0.98
TSPAN4-218ENST00000529566 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
TSPAN4-218ENST00000529566 LOC105371267A0A1B0GV96 52 aa8.91□□□□□ -0.98
TSPAN4-218ENST00000529566 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
TSPAN4-218ENST00000529566 H3BUT2 72 aa8.9□□□□□ -0.98
TSPAN4-218ENST00000529566 PSMB2P49721 201 aa8.9□□□□□ -0.98
TSPAN4-218ENST00000529566 NDUFV3P56181 108 aaKnown RBP8.89□□□□□ -0.99
TSPAN4-218ENST00000529566 TRBV7-7A0A0K0K1E9 115 aa8.88□□□□□ -0.99
TSPAN4-218ENST00000529566 COX6CP09669 75 aa8.86□□□□□ -0.99
TSPAN4-218ENST00000529566 XP32Q5T750 250 aa8.86□□□□□ -0.99
TSPAN4-218ENST00000529566 TCL1BO95988 128 aa8.85□□□□□ -0.99
TSPAN4-218ENST00000529566 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
TSPAN4-218ENST00000529566 GHRHP01286 108 aa8.84□□□□□ -0.99
TSPAN4-218ENST00000529566 FABP2P12104 132 aa8.84□□□□□ -0.99
TSPAN4-218ENST00000529566 Q6Q795 121 aa8.83□□□□□ -1
TSPAN4-218ENST00000529566 H3BMG7 143 aa8.82□□□□□ -1
TSPAN4-218ENST00000529566 M0R143 59 aa8.82□□□□□ -1
TSPAN4-218ENST00000529566 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
TSPAN4-218ENST00000529566 DNAL4O96015 105 aa8.81□□□□□ -1
TSPAN4-218ENST00000529566 C9orf92A6NGG3 77 aa8.8□□□□□ -1
TSPAN4-218ENST00000529566 H3BQ85 93 aa8.8□□□□□ -1
TSPAN4-218ENST00000529566 LST1O00453 97 aa8.8□□□□□ -1
TSPAN4-218ENST00000529566 TRACP01848 142 aa8.8□□□□□ -1
TSPAN4-218ENST00000529566 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
TSPAN4-218ENST00000529566 TEN1Q86WV5 123 aa8.79□□□□□ -1
TSPAN4-218ENST00000529566 TSTD3H0UI37 97 aa8.78□□□□□ -1
TSPAN4-218ENST00000529566 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
TSPAN4-218ENST00000529566 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
TSPAN4-218ENST00000529566 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
TSPAN4-218ENST00000529566 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
TSPAN4-218ENST00000529566 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
TSPAN4-218ENST00000529566 NAA38Q9BRA0 125 aaKnown RBP8.75□□□□□ -1.01
TSPAN4-218ENST00000529566 UBE2V1Q13404 147 aa8.74□□□□□ -1.01
TSPAN4-218ENST00000529566 A0A087WSZ3 146 aa8.72□□□□□ -1.01
TSPAN4-218ENST00000529566 ANKRD29Q8N6D5 301 aa8.72□□□□□ -1.01
TSPAN4-218ENST00000529566 A0A1B0GV72 72 aa8.71□□□□□ -1.02
TSPAN4-218ENST00000529566 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
TSPAN4-218ENST00000529566 Q96NJ1 140 aa8.7□□□□□ -1.02
TSPAN4-218ENST00000529566 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
TSPAN4-218ENST00000529566 BAALC-AS2P0C853 105 aa8.69□□□□□ -1.02
TSPAN4-218ENST00000529566 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
TSPAN4-218ENST00000529566 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
TSPAN4-218ENST00000529566 BATFQ16520 125 aa8.68□□□□□ -1.02
TSPAN4-218ENST00000529566 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
TSPAN4-218ENST00000529566 CCKP06307 115 aa8.64□□□□□ -1.03
TSPAN4-218ENST00000529566 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
TSPAN4-218ENST00000529566 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
TSPAN4-218ENST00000529566 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
TSPAN4-218ENST00000529566 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
TSPAN4-218ENST00000529566 OBSCN-AS1Q96MR7 158 aa8.62□□□□□ -1.03
TSPAN4-218ENST00000529566 C9orf118A6NHY6 69 aa8.61□□□□□ -1.03
TSPAN4-218ENST00000529566 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
TSPAN4-218ENST00000529566 DSCR8Q96T75 97 aa8.6□□□□□ -1.03
TSPAN4-218ENST00000529566 LYRM7Q5U5X0 104 aa8.59□□□□□ -1.03
TSPAN4-218ENST00000529566 LINC00472Q9H8W2 130 aa8.59□□□□□ -1.03
TSPAN4-218ENST00000529566 C9JAW5 83 aa8.56□□□□□ -1.04
TSPAN4-218ENST00000529566 Q75L30 129 aa8.56□□□□□ -1.04
TSPAN4-218ENST00000529566 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
TSPAN4-218ENST00000529566 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
TSPAN4-218ENST00000529566 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
TSPAN4-218ENST00000529566 JMJD7-PLA2G4BH0Y9G9 81 aa8.54□□□□□ -1.04
TSPAN4-218ENST00000529566 IGKV4-1P06312 121 aa8.54□□□□□ -1.04
TSPAN4-218ENST00000529566 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
TSPAN4-218ENST00000529566 Q6ZQT0 140 aa8.54□□□□□ -1.04
TSPAN4-218ENST00000529566 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
TSPAN4-218ENST00000529566 SIGMAR1Q99720 223 aa8.53□□□□□ -1.04
TSPAN4-218ENST00000529566 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
TSPAN4-218ENST00000529566 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
TSPAN4-218ENST00000529566 DSCR10P59022 87 aa8.51□□□□□ -1.05
TSPAN4-218ENST00000529566 A8MUU9 505 aa8.5□□□□□ -1.05
TSPAN4-218ENST00000529566 PDE6GP18545 87 aa8.49□□□□□ -1.05
TSPAN4-218ENST00000529566 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
TSPAN4-218ENST00000529566 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
TSPAN4-218ENST00000529566 C21orf62-AS1Q17RA5 79 aa8.48□□□□□ -1.05
TSPAN4-218ENST00000529566 A0A1B0GW54 56 aa8.47□□□□□ -1.05
TSPAN4-218ENST00000529566 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
TSPAN4-218ENST00000529566 H3BT86 120 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms