RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 Q5W150 140 aa4.93□□□□□ -1.62
CTNND1-220ENST00000529526 USP24Q9UPU5 2620 aa4.92□□□□□ -1.62
CTNND1-220ENST00000529526 Q5XG85 94 aa4.92□□□□□ -1.62
CTNND1-220ENST00000529526 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
CTNND1-220ENST00000529526 FLNAP21333 2647 aaKnown RBP4.91□□□□□ -1.62
CTNND1-220ENST00000529526 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.62
CTNND1-220ENST00000529526 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.62
CTNND1-220ENST00000529526 CSAG1Q6PB30 78 aa4.9□□□□□ -1.62
CTNND1-220ENST00000529526 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.62
CTNND1-220ENST00000529526 FP248Q71RG6 208 aaPredicted RBP4.89□□□□□ -1.63
CTNND1-220ENST00000529526 SPRR1BP22528 89 aa4.88□□□□□ -1.63
CTNND1-220ENST00000529526 KRTAP10-2P60368 255 aa4.88□□□□□ -1.63
CTNND1-220ENST00000529526 SPINK7P58062 85 aa4.88□□□□□ -1.63
CTNND1-220ENST00000529526 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
CTNND1-220ENST00000529526 ITPR3Q14573 2671 aa4.88□□□□□ -1.63
CTNND1-220ENST00000529526 Q5VSD8 79 aa4.87□□□□□ -1.63
CTNND1-220ENST00000529526 Q5VV11 94 aa4.87□□□□□ -1.63
CTNND1-220ENST00000529526 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
CTNND1-220ENST00000529526 CDH23Q9H251 3354 aa4.85□□□□□ -1.63
CTNND1-220ENST00000529526 CFAP54Q96N23 3096 aa4.85□□□□□ -1.63
CTNND1-220ENST00000529526 UNC80Q8N2C7 3258 aa4.85□□□□□ -1.63
CTNND1-220ENST00000529526 PANO1I0J062 215 aa4.84□□□□□ -1.63
CTNND1-220ENST00000529526 PRUNE2Q8WUY3 3088 aa4.83□□□□□ -1.64
CTNND1-220ENST00000529526 R4GN34 69 aa4.81□□□□□ -1.64
CTNND1-220ENST00000529526 TRIOO75962 3097 aa4.81□□□□□ -1.64
CTNND1-220ENST00000529526 ATRQ13535 2644 aa4.81□□□□□ -1.64
CTNND1-220ENST00000529526 A0A0C4DFX4 3053 aa4.81□□□□□ -1.64
CTNND1-220ENST00000529526 OXTP01178 125 aa4.8□□□□□ -1.64
CTNND1-220ENST00000529526 LCE6AA0A183 80 aa4.79□□□□□ -1.64
CTNND1-220ENST00000529526 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
CTNND1-220ENST00000529526 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-220ENST00000529526 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
CTNND1-220ENST00000529526 SZT2Q5T011 3432 aa4.77□□□□□ -1.65
CTNND1-220ENST00000529526 MGAQ8IWI9 3026 aa4.77□□□□□ -1.65
CTNND1-220ENST00000529526 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
CTNND1-220ENST00000529526 A0A087X002 238 aa4.76□□□□□ -1.65
CTNND1-220ENST00000529526 Q6ZR54 194 aa4.76□□□□□ -1.65
CTNND1-220ENST00000529526 CFAP46Q8IYW2 2715 aa4.76□□□□□ -1.65
CTNND1-220ENST00000529526 M0QZ58 72 aa4.75□□□□□ -1.65
CTNND1-220ENST00000529526 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
CTNND1-220ENST00000529526 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
CTNND1-220ENST00000529526 MAST4O15021 2626 aa4.75□□□□□ -1.65
CTNND1-220ENST00000529526 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
CTNND1-220ENST00000529526 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
CTNND1-220ENST00000529526 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CTNND1-220ENST00000529526 KRTAP11-1Q8IUC1 163 aa4.73□□□□□ -1.65
CTNND1-220ENST00000529526 ROMO1P60602 79 aa4.73□□□□□ -1.65
CTNND1-220ENST00000529526 KRTAP29-1A8MX34 341 aaPredicted RBP4.72□□□□□ -1.65
CTNND1-220ENST00000529526 XIRP2A4UGR9 3374 aa4.72□□□□□ -1.65
CTNND1-220ENST00000529526 EYSQ5T1H1 3165 aa4.7□□□□□ -1.66
CTNND1-220ENST00000529526 CENPEQ02224 2701 aa4.7□□□□□ -1.66
CTNND1-220ENST00000529526 ZNF292O60281 2723 aa4.7□□□□□ -1.66
CTNND1-220ENST00000529526 WDFY4Q6ZS81 3184 aa4.7□□□□□ -1.66
CTNND1-220ENST00000529526 CHD6Q8TD26 2715 aa4.68□□□□□ -1.66
CTNND1-220ENST00000529526 AKAP13Q12802 2813 aa4.68□□□□□ -1.66
CTNND1-220ENST00000529526 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
CTNND1-220ENST00000529526 REV3LO60673 3130 aa4.68□□□□□ -1.66
CTNND1-220ENST00000529526 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
CTNND1-220ENST00000529526 CELSR3Q9NYQ7 3312 aa4.66□□□□□ -1.66
CTNND1-220ENST00000529526 LAMA1P25391 3075 aa4.66□□□□□ -1.66
CTNND1-220ENST00000529526 TNRC18O15417 2968 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-220ENST00000529526 VCANP13611 3396 aa4.65□□□□□ -1.66
CTNND1-220ENST00000529526 Q6ZRN7 208 aaPredicted RBP4.64□□□□□ -1.67
CTNND1-220ENST00000529526 TEX15Q9BXT5 2789 aa4.64□□□□□ -1.67
CTNND1-220ENST00000529526 DNAH14Q0VDD8 3507 aa4.63□□□□□ -1.67
CTNND1-220ENST00000529526 SPEGQ15772 3267 aa4.63□□□□□ -1.67
CTNND1-220ENST00000529526 SPTBN5Q9NRC6 3674 aaKnown RBP4.63□□□□□ -1.67
CTNND1-220ENST00000529526 BAHCC1Q9P281 2608 aa4.62□□□□□ -1.67
CTNND1-220ENST00000529526 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
CTNND1-220ENST00000529526 VPS13AQ96RL7 3174 aa4.61□□□□□ -1.67
CTNND1-220ENST00000529526 A8MU10 97 aa4.61□□□□□ -1.67
CTNND1-220ENST00000529526 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
CTNND1-220ENST00000529526 GCN1Q92616 2671 aaKnown RBP4.61□□□□□ -1.67
CTNND1-220ENST00000529526 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
CTNND1-220ENST00000529526 COL6A3P12111 3177 aa4.59□□□□□ -1.67
CTNND1-220ENST00000529526 FRYQ5TBA9 3013 aa4.59□□□□□ -1.67
CTNND1-220ENST00000529526 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
CTNND1-220ENST00000529526 NBEAL1Q6ZS30 2694 aa4.58□□□□□ -1.68
CTNND1-220ENST00000529526 FRYLO94915 3013 aa4.58□□□□□ -1.68
CTNND1-220ENST00000529526 FREM2Q5SZK8 3169 aa4.58□□□□□ -1.68
CTNND1-220ENST00000529526 TEP1Q99973 2627 aaKnown RBP4.57□□□□□ -1.68
CTNND1-220ENST00000529526 SETXQ7Z333 2677 aaKnown RBP4.57□□□□□ -1.68
CTNND1-220ENST00000529526 USP34Q70CQ2 3546 aa4.57□□□□□ -1.68
CTNND1-220ENST00000529526 NBEAL2Q6ZNJ1 2754 aa4.57□□□□□ -1.68
CTNND1-220ENST00000529526 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
CTNND1-220ENST00000529526 MUC3AQ02505 3323 aa4.56□□□□□ -1.68
CTNND1-220ENST00000529526 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
CTNND1-220ENST00000529526 A8MUU9 505 aa4.55□□□□□ -1.68
CTNND1-220ENST00000529526 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
CTNND1-220ENST00000529526 UNC79Q9P2D8 2635 aa4.55□□□□□ -1.68
CTNND1-220ENST00000529526 DSPP15924 2871 aaKnown RBP4.55□□□□□ -1.68
CTNND1-220ENST00000529526 STAB1Q9NY15 2570 aa4.54□□□□□ -1.68
CTNND1-220ENST00000529526 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
CTNND1-220ENST00000529526 MYO15AQ9UKN7 3530 aa4.52□□□□□ -1.69
CTNND1-220ENST00000529526 A6NN06 94 aa4.52□□□□□ -1.69
CTNND1-220ENST00000529526 COL6A5A8TX70 2615 aa4.5□□□□□ -1.69
CTNND1-220ENST00000529526 IGSF10Q6WRI0 2623 aa4.5□□□□□ -1.69
CTNND1-220ENST00000529526 KALRNO60229 2985 aa4.5□□□□□ -1.69
CTNND1-220ENST00000529526 MAP1AP78559 2803 aaPredicted RBP4.48□□□□□ -1.69
CTNND1-220ENST00000529526 DMBT1Q9UGM3 2413 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms