RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 Q6ZRX8 168 aa5.29□□□□□ -1.56
CMTM1-210ENST00000528441 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
CMTM1-210ENST00000528441 A0A0B4J2C4 111 aa5.28□□□□□ -1.56
CMTM1-210ENST00000528441 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
CMTM1-210ENST00000528441 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
CMTM1-210ENST00000528441 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
CMTM1-210ENST00000528441 LPAP08519 4548 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 A0A1W2PPM0 123 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
CMTM1-210ENST00000528441 CFC1BP0CG36 223 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 CFC1P0CG37 223 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 COX7BP24311 80 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 MUSTN1Q8IVN3 82 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 Q9BRP9 147 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 NHP2Q9NX24 153 aaKnown RBP5.26□□□□□ -1.57
CMTM1-210ENST00000528441 PRO1854Q9UHT4 67 aa5.26□□□□□ -1.57
CMTM1-210ENST00000528441 A4D1N5 150 aa5.25□□□□□ -1.57
CMTM1-210ENST00000528441 C6orf99Q4VX62 202 aa5.25□□□□□ -1.57
CMTM1-210ENST00000528441 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
CMTM1-210ENST00000528441 FABP2P12104 132 aa5.24□□□□□ -1.57
CMTM1-210ENST00000528441 LYRM7Q5U5X0 104 aa5.24□□□□□ -1.57
CMTM1-210ENST00000528441 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
CMTM1-210ENST00000528441 DHRS4-AS1Q9P1J3 65 aa5.24□□□□□ -1.57
CMTM1-210ENST00000528441 TRBV20-1A0A075B6N2 111 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 H3BUT2 72 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 K7EP34 96 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 SPINK1P00995 79 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 VAMP3Q15836 100 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 LAMTOR3Q9UHA4 124 aa5.23□□□□□ -1.57
CMTM1-210ENST00000528441 A0A0U1RQV1 116 aa5.22□□□□□ -1.57
CMTM1-210ENST00000528441 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
CMTM1-210ENST00000528441 TRAV13-2A0A0B4J235 113 aa5.21□□□□□ -1.58
CMTM1-210ENST00000528441 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 F8W1H4 67 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 K7ERJ3 54 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 SLC25A20O43772 301 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
CMTM1-210ENST00000528441 Q1RN00 199 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
CMTM1-210ENST00000528441 RAB37Q96AX2 223 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 SPCS1Q9Y6A9 102 aa5.2□□□□□ -1.58
CMTM1-210ENST00000528441 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
CMTM1-210ENST00000528441 LIMD2Q9BT23 127 aa5.18□□□□□ -1.58
CMTM1-210ENST00000528441 TEX49A0A1B0GTD5 131 aa5.17□□□□□ -1.58
CMTM1-210ENST00000528441 F8WEM9 126 aa5.17□□□□□ -1.58
CMTM1-210ENST00000528441 COX6CP09669 75 aa5.17□□□□□ -1.58
CMTM1-210ENST00000528441 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
CMTM1-210ENST00000528441 TRBV7-6A0A0J9YX20 115 aa5.15□□□□□ -1.59
CMTM1-210ENST00000528441 H7C2G1 150 aa5.15□□□□□ -1.59
CMTM1-210ENST00000528441 PRO0461Q9UI25 63 aa5.15□□□□□ -1.59
CMTM1-210ENST00000528441 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
CMTM1-210ENST00000528441 Q8N377 158 aa5.14□□□□□ -1.59
CMTM1-210ENST00000528441 H0YGX0 51 aa5.13□□□□□ -1.59
CMTM1-210ENST00000528441 TCL1BO95988 128 aa5.13□□□□□ -1.59
CMTM1-210ENST00000528441 SPRR1BP22528 89 aa5.13□□□□□ -1.59
CMTM1-210ENST00000528441 ATXN8Q156A1 80 aa5.13□□□□□ -1.59
CMTM1-210ENST00000528441 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
CMTM1-210ENST00000528441 A0A1B0GX51 115 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 H3BMG7 143 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 LST1O00453 97 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 TRIAP1O43715 76 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 TRACP01848 142 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 SCGB1C2P0DMR2 95 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 PSMB2P49721 201 aa5.12□□□□□ -1.59
CMTM1-210ENST00000528441 hADV29S1A0JD25 119 aa5.11□□□□□ -1.59
CMTM1-210ENST00000528441 SNCGO76070 127 aa5.11□□□□□ -1.59
CMTM1-210ENST00000528441 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
CMTM1-210ENST00000528441 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
CMTM1-210ENST00000528441 Q6ZQY7 126 aa5.1□□□□□ -1.59
CMTM1-210ENST00000528441 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
CMTM1-210ENST00000528441 H3BT86 120 aa5.09□□□□□ -1.59
CMTM1-210ENST00000528441 K7ERU9 68 aa5.09□□□□□ -1.59
CMTM1-210ENST00000528441 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
CMTM1-210ENST00000528441 OCIAD2Q56VL3 154 aa5.09□□□□□ -1.59
CMTM1-210ENST00000528441 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
CMTM1-210ENST00000528441 LINC00575Q6W349 94 aa5.08□□□□□ -1.6
CMTM1-210ENST00000528441 TEN1Q86WV5 123 aa5.08□□□□□ -1.6
CMTM1-210ENST00000528441 ANKRD29Q8N6D5 301 aa5.08□□□□□ -1.6
CMTM1-210ENST00000528441 A0A0G2JQZ4 141 aa5.07□□□□□ -1.6
CMTM1-210ENST00000528441 J3QR89 54 aa5.07□□□□□ -1.6
CMTM1-210ENST00000528441 CD164Q04900 197 aa5.07□□□□□ -1.6
CMTM1-210ENST00000528441 H3BQ85 93 aa5.06□□□□□ -1.6
CMTM1-210ENST00000528441 SMIM29Q86T20 159 aa5.06□□□□□ -1.6
CMTM1-210ENST00000528441 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
CMTM1-210ENST00000528441 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
CMTM1-210ENST00000528441 ETDBQ3ZM63 59 aa5.05□□□□□ -1.6
CMTM1-210ENST00000528441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.05□□□□□ -1.6
CMTM1-210ENST00000528441 C9JAW5 83 aa5.04□□□□□ -1.6
CMTM1-210ENST00000528441 Q6JHZ5 121 aa5.04□□□□□ -1.6
CMTM1-210ENST00000528441 PPDPFLQ8WWR9 84 aa5.04□□□□□ -1.6
CMTM1-210ENST00000528441 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
CMTM1-210ENST00000528441 CLEC2BQ92478 149 aa5.03□□□□□ -1.6
CMTM1-210ENST00000528441 DNAL4O96015 105 aa5.01□□□□□ -1.61
CMTM1-210ENST00000528441 OBSCN-AS1Q96MR7 158 aa5.01□□□□□ -1.61
CMTM1-210ENST00000528441 FAM218AQ96MZ4 157 aa5.01□□□□□ -1.61
CMTM1-210ENST00000528441 MUC2Q02817 5179 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms