RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RAB37Q96AX2 223 aa8.56□□□□□ -1.04
CAPN1-213ENST00000527897 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
CAPN1-213ENST00000527897 CFC1P0CG37 223 aa8.54□□□□□ -1.04
CAPN1-213ENST00000527897 HIGD1BQ9P298 99 aa8.52□□□□□ -1.05
CAPN1-213ENST00000527897 C1orf195Q5TG92 126 aa8.51□□□□□ -1.05
CAPN1-213ENST00000527897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-213ENST00000527897 C2orf91Q6ZV80 131 aa8.51□□□□□ -1.05
CAPN1-213ENST00000527897 KRTAP4-1Q9BYQ7 146 aa8.51□□□□□ -1.05
CAPN1-213ENST00000527897 TCL1BO95988 128 aa8.5□□□□□ -1.05
CAPN1-213ENST00000527897 Q5XG85 94 aa8.5□□□□□ -1.05
CAPN1-213ENST00000527897 SNHG12Q9BXW3 62 aa8.49□□□□□ -1.05
CAPN1-213ENST00000527897 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
CAPN1-213ENST00000527897 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
CAPN1-213ENST00000527897 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
CAPN1-213ENST00000527897 Q6JHZ5 121 aa8.48□□□□□ -1.05
CAPN1-213ENST00000527897 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
CAPN1-213ENST00000527897 CEND1Q8N111 149 aa8.47□□□□□ -1.05
CAPN1-213ENST00000527897 CLEC2BQ92478 149 aa8.47□□□□□ -1.05
CAPN1-213ENST00000527897 SNCGO76070 127 aa8.46□□□□□ -1.06
CAPN1-213ENST00000527897 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
CAPN1-213ENST00000527897 A6NJY4 79 aa8.45□□□□□ -1.06
CAPN1-213ENST00000527897 H3BUT2 72 aa8.45□□□□□ -1.06
CAPN1-213ENST00000527897 PCOTHQ58A44 107 aa8.45□□□□□ -1.06
CAPN1-213ENST00000527897 PPDPFLQ8WWR9 84 aa8.45□□□□□ -1.06
CAPN1-213ENST00000527897 TMA7Q9Y2S6 64 aaKnown RBP8.45□□□□□ -1.06
CAPN1-213ENST00000527897 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
CAPN1-213ENST00000527897 H0YGX0 51 aa8.44□□□□□ -1.06
CAPN1-213ENST00000527897 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
CAPN1-213ENST00000527897 FXYD2P54710 66 aa8.43□□□□□ -1.06
CAPN1-213ENST00000527897 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
CAPN1-213ENST00000527897 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
CAPN1-213ENST00000527897 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
CAPN1-213ENST00000527897 FABP2P12104 132 aa8.38□□□□□ -1.07
CAPN1-213ENST00000527897 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
CAPN1-213ENST00000527897 TRIAP1O43715 76 aa8.37□□□□□ -1.07
CAPN1-213ENST00000527897 HSD52Q0P140 79 aa8.37□□□□□ -1.07
CAPN1-213ENST00000527897 K7ERJ3 54 aa8.36□□□□□ -1.07
CAPN1-213ENST00000527897 PSMB2P49721 201 aa8.36□□□□□ -1.07
CAPN1-213ENST00000527897 H3BMG7 143 aa8.34□□□□□ -1.07
CAPN1-213ENST00000527897 LST1O00453 97 aa8.34□□□□□ -1.07
CAPN1-213ENST00000527897 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
CAPN1-213ENST00000527897 A0A1B0GX51 115 aa8.33□□□□□ -1.08
CAPN1-213ENST00000527897 GHRHP01286 108 aa8.33□□□□□ -1.08
CAPN1-213ENST00000527897 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
CAPN1-213ENST00000527897 DNAL4O96015 105 aa8.32□□□□□ -1.08
CAPN1-213ENST00000527897 A0A1B0GV72 72 aa8.31□□□□□ -1.08
CAPN1-213ENST00000527897 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
CAPN1-213ENST00000527897 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
CAPN1-213ENST00000527897 UQCR10Q9UDW1 63 aa8.31□□□□□ -1.08
CAPN1-213ENST00000527897 SS18L2Q9UHA2 77 aa8.31□□□□□ -1.08
CAPN1-213ENST00000527897 A0A087WSZ3 146 aa8.29□□□□□ -1.08
CAPN1-213ENST00000527897 COX6CP09669 75 aa8.28□□□□□ -1.08
CAPN1-213ENST00000527897 Q6Q795 121 aa8.28□□□□□ -1.08
CAPN1-213ENST00000527897 ORMDL1Q9P0S3 153 aa8.28□□□□□ -1.08
CAPN1-213ENST00000527897 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
CAPN1-213ENST00000527897 Q96NJ1 140 aa8.24□□□□□ -1.09
CAPN1-213ENST00000527897 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
CAPN1-213ENST00000527897 SCGB1C2P0DMR2 95 aa8.23□□□□□ -1.09
CAPN1-213ENST00000527897 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
CAPN1-213ENST00000527897 ANKRD29Q8N6D5 301 aa8.23□□□□□ -1.09
CAPN1-213ENST00000527897 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
CAPN1-213ENST00000527897 H3BQ85 93 aa8.21□□□□□ -1.1
CAPN1-213ENST00000527897 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
CAPN1-213ENST00000527897 Q75L30 129 aa8.2□□□□□ -1.1
CAPN1-213ENST00000527897 SIGMAR1Q99720 223 aa8.2□□□□□ -1.1
CAPN1-213ENST00000527897 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
CAPN1-213ENST00000527897 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
CAPN1-213ENST00000527897 MT1HP80294 61 aa8.17□□□□□ -1.1
CAPN1-213ENST00000527897 TRBV7-4A0A0J9YYF1 115 aa8.16□□□□□ -1.1
CAPN1-213ENST00000527897 CCKP06307 115 aa8.16□□□□□ -1.1
CAPN1-213ENST00000527897 DSCR10P59022 87 aa8.16□□□□□ -1.1
CAPN1-213ENST00000527897 TRACP01848 142 aa8.15□□□□□ -1.1
CAPN1-213ENST00000527897 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
CAPN1-213ENST00000527897 VPS25Q9BRG1 176 aa8.15□□□□□ -1.1
CAPN1-213ENST00000527897 UBE2V1Q13404 147 aa8.14□□□□□ -1.11
CAPN1-213ENST00000527897 DEFB116Q30KQ4 102 aa8.13□□□□□ -1.11
CAPN1-213ENST00000527897 M0R2T5 61 aa8.12□□□□□ -1.11
CAPN1-213ENST00000527897 NAA38Q9BRA0 125 aaKnown RBP8.12□□□□□ -1.11
CAPN1-213ENST00000527897 M0R143 59 aa8.11□□□□□ -1.11
CAPN1-213ENST00000527897 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
CAPN1-213ENST00000527897 RBM3P98179 157 aaKnown RBP8.1□□□□□ -1.11
CAPN1-213ENST00000527897 A8MUU9 505 aa8.09□□□□□ -1.11
CAPN1-213ENST00000527897 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
CAPN1-213ENST00000527897 LINC00313P59037 77 aa8.09□□□□□ -1.11
CAPN1-213ENST00000527897 DSCR8Q96T75 97 aa8.09□□□□□ -1.11
CAPN1-213ENST00000527897 SMIM6P0DI80 62 aa8.06□□□□□ -1.12
CAPN1-213ENST00000527897 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
CAPN1-213ENST00000527897 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
CAPN1-213ENST00000527897 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
CAPN1-213ENST00000527897 C9JAW5 83 aa8.04□□□□□ -1.12
CAPN1-213ENST00000527897 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
CAPN1-213ENST00000527897 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
CAPN1-213ENST00000527897 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
CAPN1-213ENST00000527897 BATFQ16520 125 aa8.02□□□□□ -1.13
CAPN1-213ENST00000527897 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
CAPN1-213ENST00000527897 TRBV20-1A0A075B6N2 111 aa8□□□□□ -1.13
CAPN1-213ENST00000527897 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
CAPN1-213ENST00000527897 TSTD3H0UI37 97 aa7.99□□□□□ -1.13
CAPN1-213ENST00000527897 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
CAPN1-213ENST00000527897 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms