RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
LTBP3-208ENST00000527339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
LTBP3-208ENST00000527339 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
LTBP3-208ENST00000527339 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
LTBP3-208ENST00000527339 SNCGO76070 127 aa9.85□□□□□ -0.83
LTBP3-208ENST00000527339 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
LTBP3-208ENST00000527339 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
LTBP3-208ENST00000527339 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
LTBP3-208ENST00000527339 F8WEM9 126 aa9.82□□□□□ -0.84
LTBP3-208ENST00000527339 CD164Q04900 197 aa9.82□□□□□ -0.84
LTBP3-208ENST00000527339 K7ERJ3 54 aa9.81□□□□□ -0.84
LTBP3-208ENST00000527339 TRIAP1O43715 76 aa9.81□□□□□ -0.84
LTBP3-208ENST00000527339 TPRXLQ17RH7 258 aa9.81□□□□□ -0.84
LTBP3-208ENST00000527339 FAM218AQ96MZ4 157 aa9.81□□□□□ -0.84
LTBP3-208ENST00000527339 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
LTBP3-208ENST00000527339 A0A1B0GX51 115 aa9.8□□□□□ -0.84
LTBP3-208ENST00000527339 OCIAD2Q56VL3 154 aa9.8□□□□□ -0.84
LTBP3-208ENST00000527339 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
LTBP3-208ENST00000527339 MUC17Q685J3 4493 aa9.78□□□□□ -0.84
LTBP3-208ENST00000527339 KRTAP9-6A0A140TA67 174 aa9.77□□□□□ -0.85
LTBP3-208ENST00000527339 LOC105371267A0A1B0GV96 52 aa9.77□□□□□ -0.85
LTBP3-208ENST00000527339 PSMB2P49721 201 aa9.77□□□□□ -0.85
LTBP3-208ENST00000527339 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
LTBP3-208ENST00000527339 SNHG12Q9BXW3 62 aa9.76□□□□□ -0.85
LTBP3-208ENST00000527339 COX6CP09669 75 aa9.75□□□□□ -0.85
LTBP3-208ENST00000527339 Q6JHZ5 121 aa9.75□□□□□ -0.85
LTBP3-208ENST00000527339 A0A0G2JQZ4 141 aa9.74□□□□□ -0.85
LTBP3-208ENST00000527339 GHRHP01286 108 aa9.74□□□□□ -0.85
LTBP3-208ENST00000527339 M0R143 59 aa9.73□□□□□ -0.85
LTBP3-208ENST00000527339 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
LTBP3-208ENST00000527339 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
LTBP3-208ENST00000527339 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
LTBP3-208ENST00000527339 Q5XG85 94 aa9.72□□□□□ -0.85
LTBP3-208ENST00000527339 TSTD3H0UI37 97 aa9.71□□□□□ -0.86
LTBP3-208ENST00000527339 DNAL4O96015 105 aa9.7□□□□□ -0.86
LTBP3-208ENST00000527339 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
LTBP3-208ENST00000527339 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
LTBP3-208ENST00000527339 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
LTBP3-208ENST00000527339 H3BQ85 93 aa9.66□□□□□ -0.86
LTBP3-208ENST00000527339 H3BUT2 72 aa9.66□□□□□ -0.86
LTBP3-208ENST00000527339 FABP2P12104 132 aa9.66□□□□□ -0.86
LTBP3-208ENST00000527339 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
LTBP3-208ENST00000527339 TCL1BO95988 128 aa9.65□□□□□ -0.86
LTBP3-208ENST00000527339 SCGB1C2P0DMR2 95 aa9.65□□□□□ -0.86
LTBP3-208ENST00000527339 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
LTBP3-208ENST00000527339 H3BMG7 143 aa9.62□□□□□ -0.87
LTBP3-208ENST00000527339 LST1O00453 97 aa9.62□□□□□ -0.87
LTBP3-208ENST00000527339 TRACP01848 142 aa9.62□□□□□ -0.87
LTBP3-208ENST00000527339 C1orf195Q5TG92 126 aa9.62□□□□□ -0.87
LTBP3-208ENST00000527339 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
LTBP3-208ENST00000527339 ASB16-AS1Q495Z4 193 aa9.59□□□□□ -0.87
LTBP3-208ENST00000527339 Q6Q795 121 aa9.59□□□□□ -0.87
LTBP3-208ENST00000527339 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
LTBP3-208ENST00000527339 UBE2V1Q13404 147 aa9.55□□□□□ -0.88
LTBP3-208ENST00000527339 BATFQ16520 125 aa9.55□□□□□ -0.88
LTBP3-208ENST00000527339 NAA38Q9BRA0 125 aaKnown RBP9.55□□□□□ -0.88
LTBP3-208ENST00000527339 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
LTBP3-208ENST00000527339 XP32Q5T750 250 aa9.53□□□□□ -0.88
LTBP3-208ENST00000527339 ATXN8Q156A1 80 aa9.52□□□□□ -0.89
LTBP3-208ENST00000527339 C9orf92A6NGG3 77 aa9.51□□□□□ -0.89
LTBP3-208ENST00000527339 LYRM7Q5U5X0 104 aa9.51□□□□□ -0.89
LTBP3-208ENST00000527339 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
LTBP3-208ENST00000527339 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
LTBP3-208ENST00000527339 A0A1B0GV72 72 aa9.5□□□□□ -0.89
LTBP3-208ENST00000527339 A0A087WSZ3 146 aa9.49□□□□□ -0.89
LTBP3-208ENST00000527339 A0A1W2PNM2 257 aa9.49□□□□□ -0.89
LTBP3-208ENST00000527339 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
LTBP3-208ENST00000527339 BAALC-AS2P0C853 105 aa9.48□□□□□ -0.89
LTBP3-208ENST00000527339 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
LTBP3-208ENST00000527339 TRBV20-1A0A075B6N2 111 aa9.45□□□□□ -0.9
LTBP3-208ENST00000527339 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
LTBP3-208ENST00000527339 KRTAP4-1Q9BYQ7 146 aa9.44□□□□□ -0.9
LTBP3-208ENST00000527339 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
LTBP3-208ENST00000527339 TAX1BP3O14907 124 aa9.43□□□□□ -0.9
LTBP3-208ENST00000527339 CCKP06307 115 aa9.43□□□□□ -0.9
LTBP3-208ENST00000527339 DSCR8Q96T75 97 aa9.42□□□□□ -0.9
LTBP3-208ENST00000527339 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
LTBP3-208ENST00000527339 Q96NJ1 140 aa9.39□□□□□ -0.91
LTBP3-208ENST00000527339 A0A1W2PPM0 123 aa9.38□□□□□ -0.91
LTBP3-208ENST00000527339 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
LTBP3-208ENST00000527339 C9JAW5 83 aa9.37□□□□□ -0.91
LTBP3-208ENST00000527339 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
LTBP3-208ENST00000527339 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
LTBP3-208ENST00000527339 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
LTBP3-208ENST00000527339 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
LTBP3-208ENST00000527339 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
LTBP3-208ENST00000527339 OBSCN-AS1Q96MR7 158 aa9.33□□□□□ -0.92
LTBP3-208ENST00000527339 COL5A1-AS1Q5SY13 56 aa9.32□□□□□ -0.92
LTBP3-208ENST00000527339 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
LTBP3-208ENST00000527339 LOC110117498A0A087WWA1 95 aa9.31□□□□□ -0.92
LTBP3-208ENST00000527339 PDE6GP18545 87 aa9.31□□□□□ -0.92
LTBP3-208ENST00000527339 H3BT86 120 aa9.3□□□□□ -0.92
LTBP3-208ENST00000527339 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
LTBP3-208ENST00000527339 Q6ZQT0 140 aa9.3□□□□□ -0.92
LTBP3-208ENST00000527339 LINC00472Q9H8W2 130 aa9.3□□□□□ -0.92
LTBP3-208ENST00000527339 A0A1B0GW54 56 aa9.27□□□□□ -0.93
LTBP3-208ENST00000527339 C14orf132Q9NPU4 83 aa9.27□□□□□ -0.93
LTBP3-208ENST00000527339 SPCS1Q9Y6A9 102 aa9.27□□□□□ -0.93
LTBP3-208ENST00000527339 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
LTBP3-208ENST00000527339 Q75L30 129 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms