RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 QSER1Q2KHR3 1735 aa0.3□□□□□ -2.36
ECHDC1-219ENST00000526299 A0A1B0GUL6 1792 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 KNTC1P50748 2209 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 ABCA5Q8WWZ7 1642 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 MMP24-AS1A0A0U1RRL7 71 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 A8MTW9 85 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 DDX60Q8IY21 1712 aaKnown RBP0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 TOGARAM1Q9Y4F4 1720 aa0.29□□□□□ -2.36
ECHDC1-219ENST00000526299 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 IQGAP1P46940 1657 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 WNK2Q9Y3S1 2297 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 A0A096LNI7 61 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 TNP1P09430 55 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 HTN1P15515 57 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 ROS1P08922 2347 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 ZDBF2Q9HCK1 2354 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 JMJD1CQ15652 2540 aa0.28□□□□□ -2.36
ECHDC1-219ENST00000526299 MDN1Q9NU22 5596 aa0.28□□□□□ -2.37
ECHDC1-219ENST00000526299 TRPM2O94759 1503 aa0.28□□□□□ -2.37
ECHDC1-219ENST00000526299 CACNA1CQ13936 2221 aa0.28□□□□□ -2.37
ECHDC1-219ENST00000526299 PTPRQQ9UMZ3 2332 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 TJP1Q07157 1748 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 PARP4Q9UKK3 1724 aaKnown RBP0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 ANKRD36CQ5JPF3 1778 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 C9orf92A6NGG3 77 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 M0QZ58 72 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 CLPSL2Q6UWE3 100 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 TNCP24821 2201 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 NFAT5O94916 1531 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 CDC42BPAQ5VT25 1732 aa0.27□□□□□ -2.37
ECHDC1-219ENST00000526299 USF3Q68DE3 2245 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 LINC01590Q5TEZ4 76 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 SMR3AQ99954 134 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 RHPN1-AS1Q9BWJ2 59 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 ATP7AQ04656 1500 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 DUOX1Q9NRD9 1551 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 KIF21BO75037 1637 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 NRXN3Q9Y4C0 1643 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 FAM208BQ5VWN6 2430 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 ALMS1Q8TCU4 4167 aa0.26□□□□□ -2.37
ECHDC1-219ENST00000526299 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
ECHDC1-219ENST00000526299 CLTCL1P53675 1640 aa0.25□□□□□ -2.37
ECHDC1-219ENST00000526299 PRM1P04553 51 aa0.25□□□□□ -2.37
ECHDC1-219ENST00000526299 PRCDQ00LT1 54 aa0.25□□□□□ -2.37
ECHDC1-219ENST00000526299 AHCTF1Q8WYP5 2266 aa0.25□□□□□ -2.37
ECHDC1-219ENST00000526299 SAMD9LQ8IVG5 1584 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 SPTBN2O15020 2390 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.376e-8■■■■□ 24.3
ECHDC1-219ENST00000526299 PLCE1Q9P212 2302 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 PKDREJQ9NTG1 2253 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 DEFB108AA8MXU0 73 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 APELAP0DMC3 54 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 KRTAP19-3Q7Z4W3 81 aa0.24□□□□□ -2.37
ECHDC1-219ENST00000526299 MROH2BQ7Z745 1585 aa0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 TPRP12270 2363 aaKnown RBP0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 AKAP6Q13023 2319 aa0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 DEFB136Q30KP8 78 aa0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 DEFB133Q30KQ1 61 aa0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 GCC2Q8IWJ2 1684 aa0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 SPTBN1Q01082 2364 aaKnown RBP0.23□□□□□ -2.37
ECHDC1-219ENST00000526299 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 SYNE1Q8NF91 8797 aaKnown RBP0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 CD52P31358 61 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 DEFB1P60022 68 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 RPL39P5Q59GN2 51 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 TMEM167AQ8TBQ9 72 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 FRAS1Q86XX4 4008 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 ANK2Q01484 3957 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 ZNF462Q96JM2 2506 aa0.22□□□□□ -2.37
ECHDC1-219ENST00000526299 KMT2DO14686 5537 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 LPAP08519 4548 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 PDE4DIPQ5VU43 2346 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 ABCA2Q9BZC7 2435 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 A0A096LPF7 62 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 KRTAP2-3P0C7H8 128 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 KRTAP2-4Q9BYR9 128 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 KRTAP2-1Q9BYU5 128 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 C2CD3Q4AC94 2353 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 USP24Q9UPU5 2620 aa0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 PTPRZ1P23471 2315 aaPredicted RBP0.21□□□□□ -2.38
ECHDC1-219ENST00000526299 CNOT1A5YKK6 2376 aaKnown RBP0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 CACNA1HO95180 2353 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 ABCA12Q86UK0 2595 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 K7EIM0 57 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 HTN3P15516 51 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 MEGF8Q7Z7M0 2845 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
ECHDC1-219ENST00000526299 BDP1A6H8Y1 2624 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 ANKRD17O75179 2603 aaKnown RBP0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 F8P00451 2351 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 KNL1Q8NG31 2342 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 BSNQ9UPA5 3926 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH9Q9NYC9 4486 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 H3BUX3 64 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 KRTAP21-1Q3LI58 79 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 PIEZO2Q9H5I5 2752 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms