RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 SPRR1BP22528 89 aa7.91□□□□□ -1.14
KDM2A-207ENST00000526258 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
KDM2A-207ENST00000526258 R4GN34 69 aa7.9□□□□□ -1.14
KDM2A-207ENST00000526258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.15
KDM2A-207ENST00000526258 FASNP49327 2511 aaKnown RBP7.9□□□□□ -1.15
KDM2A-207ENST00000526258 KRTAP26-1Q6PEX3 210 aa7.89□□□□□ -1.15
KDM2A-207ENST00000526258 EPG5Q9HCE0 2579 aa7.89□□□□□ -1.15
KDM2A-207ENST00000526258 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
KDM2A-207ENST00000526258 ATRQ13535 2644 aa7.83□□□□□ -1.16
KDM2A-207ENST00000526258 A0A087X002 238 aa7.82□□□□□ -1.16
KDM2A-207ENST00000526258 A0A0C4DFX4 3053 aa7.81□□□□□ -1.16
KDM2A-207ENST00000526258 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
KDM2A-207ENST00000526258 M0R2T5 61 aa7.76□□□□□ -1.17
KDM2A-207ENST00000526258 M0QZ58 72 aa7.75□□□□□ -1.17
KDM2A-207ENST00000526258 KRTAP4-16G5E9R7 235 aaPredicted RBP7.72□□□□□ -1.17
KDM2A-207ENST00000526258 PANO1I0J062 215 aa7.71□□□□□ -1.18
KDM2A-207ENST00000526258 A8MUU9 505 aa7.69□□□□□ -1.18
KDM2A-207ENST00000526258 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
KDM2A-207ENST00000526258 MAST4O15021 2626 aa7.69□□□□□ -1.18
KDM2A-207ENST00000526258 HECTD1Q9ULT8 2610 aa7.68□□□□□ -1.18
KDM2A-207ENST00000526258 AKAP13Q12802 2813 aa7.67□□□□□ -1.18
KDM2A-207ENST00000526258 EP400Q96L91 3159 aa7.67□□□□□ -1.18
KDM2A-207ENST00000526258 PLAC8Q9NZF1 115 aa7.67□□□□□ -1.18
KDM2A-207ENST00000526258 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
KDM2A-207ENST00000526258 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
KDM2A-207ENST00000526258 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
KDM2A-207ENST00000526258 STAB1Q9NY15 2570 aa7.6□□□□□ -1.19
KDM2A-207ENST00000526258 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
KDM2A-207ENST00000526258 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
KDM2A-207ENST00000526258 GOLGB1Q14789 3259 aaKnown RBP7.59□□□□□ -1.19
KDM2A-207ENST00000526258 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
KDM2A-207ENST00000526258 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
KDM2A-207ENST00000526258 DNAH12Q6ZR08 3092 aa7.54□□□□□ -1.2
KDM2A-207ENST00000526258 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
KDM2A-207ENST00000526258 ITPR3Q14573 2671 aa7.54□□□□□ -1.2
KDM2A-207ENST00000526258 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
KDM2A-207ENST00000526258 CFAP54Q96N23 3096 aa7.5□□□□□ -1.21
KDM2A-207ENST00000526258 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
KDM2A-207ENST00000526258 CEP350Q5VT06 3117 aa7.47□□□□□ -1.21
KDM2A-207ENST00000526258 CENPEQ02224 2701 aa7.46□□□□□ -1.21
KDM2A-207ENST00000526258 GCN1Q92616 2671 aaKnown RBP7.46□□□□□ -1.22
KDM2A-207ENST00000526258 KRTAP1-3Q8IUG1 177 aa7.45□□□□□ -1.22
KDM2A-207ENST00000526258 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
KDM2A-207ENST00000526258 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
KDM2A-207ENST00000526258 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
KDM2A-207ENST00000526258 HELZ2Q9BYK8 2649 aaKnown RBP7.42□□□□□ -1.22
KDM2A-207ENST00000526258 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
KDM2A-207ENST00000526258 PCNTO95613 3336 aa7.38□□□□□ -1.23
KDM2A-207ENST00000526258 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
KDM2A-207ENST00000526258 NBEAL2Q6ZNJ1 2754 aa7.32□□□□□ -1.24
KDM2A-207ENST00000526258 KRTAP10-1P60331 282 aa7.31□□□□□ -1.24
KDM2A-207ENST00000526258 C5orf42Q9H799 3197 aa7.3□□□□□ -1.24
KDM2A-207ENST00000526258 FREM2Q5SZK8 3169 aa7.29□□□□□ -1.24
KDM2A-207ENST00000526258 LAMA2P24043 3122 aaKnown RBP7.29□□□□□ -1.24
KDM2A-207ENST00000526258 CFAP46Q8IYW2 2715 aa7.28□□□□□ -1.24
KDM2A-207ENST00000526258 COL6A5A8TX70 2615 aa7.28□□□□□ -1.24
KDM2A-207ENST00000526258 KRTAP10-2P60368 255 aa7.27□□□□□ -1.25
KDM2A-207ENST00000526258 UTRNP46939 3433 aa7.27□□□□□ -1.25
KDM2A-207ENST00000526258 H0YAA0 97 aa7.26□□□□□ -1.25
KDM2A-207ENST00000526258 ITPR1Q14643 2758 aa7.25□□□□□ -1.25
KDM2A-207ENST00000526258 Q5VSD8 79 aa7.25□□□□□ -1.25
KDM2A-207ENST00000526258 P0C880 135 aa7.25□□□□□ -1.25
KDM2A-207ENST00000526258 TNP1P09430 55 aa7.23□□□□□ -1.25
KDM2A-207ENST00000526258 BAHCC1Q9P281 2608 aa7.21□□□□□ -1.25
KDM2A-207ENST00000526258 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
KDM2A-207ENST00000526258 TEX15Q9BXT5 2789 aa7.15□□□□□ -1.26
KDM2A-207ENST00000526258 TEP1Q99973 2627 aaKnown RBP7.14□□□□□ -1.27
KDM2A-207ENST00000526258 CHD7Q9P2D1 2997 aa7.12□□□□□ -1.27
KDM2A-207ENST00000526258 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
KDM2A-207ENST00000526258 MGAQ8IWI9 3026 aa7.11□□□□□ -1.27
KDM2A-207ENST00000526258 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
KDM2A-207ENST00000526258 FRYQ5TBA9 3013 aa7.09□□□□□ -1.28
KDM2A-207ENST00000526258 NSD1Q96L73 2696 aaPredicted RBP7.08□□□□□ -1.28
KDM2A-207ENST00000526258 KRTAP13-2Q52LG2 175 aa7.07□□□□□ -1.28
KDM2A-207ENST00000526258 MAP1AP78559 2803 aaPredicted RBP7.04□□□□□ -1.28
KDM2A-207ENST00000526258 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
KDM2A-207ENST00000526258 NBEAQ8NFP9 2946 aa7.02□□□□□ -1.28
KDM2A-207ENST00000526258 IGSF10Q6WRI0 2623 aa7.02□□□□□ -1.28
KDM2A-207ENST00000526258 KALRNO60229 2985 aa7.02□□□□□ -1.28
KDM2A-207ENST00000526258 PRUNE2Q8WUY3 3088 aa7.01□□□□□ -1.29
KDM2A-207ENST00000526258 DSPP15924 2871 aaKnown RBP7.01□□□□□ -1.29
KDM2A-207ENST00000526258 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
KDM2A-207ENST00000526258 TRIOO75962 3097 aa7□□□□□ -1.29
KDM2A-207ENST00000526258 LRBAP50851 2863 aa6.99□□□□□ -1.29
KDM2A-207ENST00000526258 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
KDM2A-207ENST00000526258 SETXQ7Z333 2677 aaKnown RBP6.98□□□□□ -1.29
KDM2A-207ENST00000526258 TRANK1O15050 2925 aa6.98□□□□□ -1.29
KDM2A-207ENST00000526258 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
KDM2A-207ENST00000526258 APCP25054 2843 aa6.97□□□□□ -1.29
KDM2A-207ENST00000526258 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
KDM2A-207ENST00000526258 VPS13AQ96RL7 3174 aa6.89□□□□□ -1.31
KDM2A-207ENST00000526258 UTP20O75691 2785 aaKnown RBP6.89□□□□□ -1.31
KDM2A-207ENST00000526258 RANBP2P49792 3224 aaKnown RBP6.89□□□□□ -1.31
KDM2A-207ENST00000526258 HTTP42858 3142 aa6.88□□□□□ -1.31
KDM2A-207ENST00000526258 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
KDM2A-207ENST00000526258 WDFY4Q6ZS81 3184 aa6.87□□□□□ -1.31
KDM2A-207ENST00000526258 ZNF292O60281 2723 aa6.84□□□□□ -1.31
KDM2A-207ENST00000526258 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
KDM2A-207ENST00000526258 UNC80Q8N2C7 3258 aa6.8□□□□□ -1.32
KDM2A-207ENST00000526258 DMXL2Q8TDJ6 3036 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms