RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
CSDE1-211ENST00000525970 ABCA1O95477 2261 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 IGLV5-48A0A075B6I7 105 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 UQCR11O14957 56 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 DEFB4AO15263 64 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 ACYP2P14621 99 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 LELP1Q5T871 98 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 Q6ZRX8 168 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 PRO3102Q9H379 93 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 CADP27708 2225 aa1.29□□□□□ -2.2
CSDE1-211ENST00000525970 CACNA1EQ15878 2313 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 A0A096LNI7 61 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 SPRR4Q96PI1 79 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 MED13LQ71F56 2210 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 URB1O60287 2271 aaKnown RBP1.28□□□□□ -2.2
CSDE1-211ENST00000525970 PTPRQQ9UMZ3 2332 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 CEP250Q9BV73 2442 aa1.28□□□□□ -2.2
CSDE1-211ENST00000525970 ABCA4P78363 2273 aa1.27□□□□□ -2.21
CSDE1-211ENST00000525970 AHCTF1Q8WYP5 2266 aa1.27□□□□□ -2.21
CSDE1-211ENST00000525970 DEFB131BA0A096LNP1 70 aa1.27□□□□□ -2.21
CSDE1-211ENST00000525970 DEFB135Q30KP9 77 aa1.27□□□□□ -2.21
CSDE1-211ENST00000525970 FAM186AA6NE01 2351 aa1.27□□□□□ -2.21
CSDE1-211ENST00000525970 SPTBN2O15020 2390 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 PLCE1Q9P212 2302 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 MMP24-AS1A0A0U1RRL7 71 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 PRLHP81277 87 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 PKDREJQ9NTG1 2253 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 DOPEY2Q9Y3R5 2298 aa1.26□□□□□ -2.21
CSDE1-211ENST00000525970 COL6A3P12111 3177 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 C5orf42Q9H799 3197 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 CEP350Q5VT06 3117 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 SPATA8Q6RVD6 105 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 SSBP3-AS1Q7Z2R9 100 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 DEFB123Q8N688 67 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
CSDE1-211ENST00000525970 PLAC8Q9NZF1 115 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 WNK2Q9Y3S1 2297 aa1.25□□□□□ -2.21
CSDE1-211ENST00000525970 ZDBF2Q9HCK1 2354 aa1.24□□□□□ -2.21
CSDE1-211ENST00000525970 K7EIL1 84 aa1.24□□□□□ -2.21
CSDE1-211ENST00000525970 SPINK1P00995 79 aa1.24□□□□□ -2.21
CSDE1-211ENST00000525970 SPINK6Q6UWN8 80 aa1.24□□□□□ -2.21
CSDE1-211ENST00000525970 MAP1BP46821 2468 aaKnown RBP1.24□□□□□ -2.21
CSDE1-211ENST00000525970 SPTBN1Q01082 2364 aaKnown RBP1.23□□□□□ -2.21
CSDE1-211ENST00000525970 CHD7Q9P2D1 2997 aa1.23□□□□□ -2.21
CSDE1-211ENST00000525970 PTPRZ1P23471 2315 aaPredicted RBP1.23□□□□□ -2.21
CSDE1-211ENST00000525970 ZZEF1O43149 2961 aa1.23□□□□□ -2.21
CSDE1-211ENST00000525970 SPRR1AP35321 89 aa1.23□□□□□ -2.21
CSDE1-211ENST00000525970 HTTP42858 3142 aa1.23□□□□□ -2.21
CSDE1-211ENST00000525970 UNC80Q8N2C7 3258 aa1.23□□□□□ -2.21
CSDE1-211ENST00000525970 LINC01556Q5JQF7 62 aa1.22□□□□□ -2.21
CSDE1-211ENST00000525970 UBE2DNLQ8IWF7 75 aa1.22□□□□□ -2.21
CSDE1-211ENST00000525970 LINC00472Q9H8W2 130 aa1.22□□□□□ -2.21
CSDE1-211ENST00000525970 CHD9Q3L8U1 2897 aa1.22□□□□□ -2.21
CSDE1-211ENST00000525970 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
CSDE1-211ENST00000525970 UTRNP46939 3433 aa1.21□□□□□ -2.22
CSDE1-211ENST00000525970 TPRP12270 2363 aaKnown RBP1.21□□□□□ -2.22
CSDE1-211ENST00000525970 TRANK1O15050 2925 aa1.21□□□□□ -2.22
CSDE1-211ENST00000525970 RANBP2P49792 3224 aaKnown RBP1.21□□□□□ -2.22
CSDE1-211ENST00000525970 NBEAQ8NFP9 2946 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 H3BNG1 76 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 CRIPTQ9P021 101 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 TRIOO75962 3097 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 FRYLO94915 3013 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 APC2O95996 2303 aa1.2□□□□□ -2.22
CSDE1-211ENST00000525970 WNK1Q9H4A3 2382 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 SZT2Q5T011 3432 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 LY6G6CO95867 125 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 SPRR1BP22528 89 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 LAMA1P25391 3075 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 WDFY4Q6ZS81 3184 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 VPS13AQ96RL7 3174 aa1.19□□□□□ -2.22
CSDE1-211ENST00000525970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.18□□□□□ -2.222e-6■■■□□ 16.8
CSDE1-211ENST00000525970 PCNX1Q96RV3 2341 aa1.18□□□□□ -2.22
CSDE1-211ENST00000525970 MGAQ8IWI9 3026 aa1.18□□□□□ -2.22
CSDE1-211ENST00000525970 MKI67P46013 3256 aaKnown RBP1.18□□□□□ -2.22
CSDE1-211ENST00000525970 CFAP47Q6ZTR5 3102 aa1.18□□□□□ -2.22
CSDE1-211ENST00000525970 CFAP54Q96N23 3096 aa1.18□□□□□ -2.22
CSDE1-211ENST00000525970 CNOT1A5YKK6 2376 aaKnown RBP1.18□□□□□ -2.22
CSDE1-211ENST00000525970 FRYQ5TBA9 3013 aa1.18□□□□□ -2.22
CSDE1-211ENST00000525970 LAMA2P24043 3122 aaKnown RBP1.18□□□□□ -2.22
CSDE1-211ENST00000525970 EP300Q09472 2414 aaPredicted RBP1.17□□□□□ -2.22
CSDE1-211ENST00000525970 H1FX-AS1Q4G0G2 97 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 Q96NJ1 140 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 XIRP2A4UGR9 3374 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 PIEZO2Q9H5I5 2752 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 REV3LO60673 3130 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 ANKHD1Q8IWZ3 2542 aaKnown RBP1.17□□□□□ -2.22
CSDE1-211ENST00000525970 KALRNO60229 2985 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 ASH1LQ9NR48 2969 aaKnown RBP1.17□□□□□ -2.22
CSDE1-211ENST00000525970 PRUNE2Q8WUY3 3088 aa1.17□□□□□ -2.22
CSDE1-211ENST00000525970 CEP290O15078 2479 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 TNRC18O15417 2968 aaPredicted RBP1.16□□□□□ -2.22
CSDE1-211ENST00000525970 DCHS1Q96JQ0 3298 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 BRCA2P51587 3418 aa1.16□□□□□ -2.22
CSDE1-211ENST00000525970 DSPP15924 2871 aaKnown RBP1.16□□□□□ -2.22
CSDE1-211ENST00000525970 DNAH14Q0VDD8 3507 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms