RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LAMTOR3Q9UHA4 124 aa2.65□□□□□ -1.99
CHMP4A-202ENST00000524955 H0YGX0 51 aa2.64□□□□□ -1.99
CHMP4A-202ENST00000524955 H3BUT2 72 aa2.64□□□□□ -1.99
CHMP4A-202ENST00000524955 FABP2P12104 132 aa2.64□□□□□ -1.99
CHMP4A-202ENST00000524955 C4orf48Q5BLP8 95 aa2.64□□□□□ -1.99
CHMP4A-202ENST00000524955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-202ENST00000524955 SSBP3-AS1Q7Z2R9 100 aa2.63□□□□□ -1.99
CHMP4A-202ENST00000524955 SNHG12Q9BXW3 62 aa2.63□□□□□ -1.99
CHMP4A-202ENST00000524955 DMBT1Q9UGM3 2413 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-202ENST00000524955 TNXBP22105 4242 aa2.63□□□□□ -1.99
CHMP4A-202ENST00000524955 F8WEM9 126 aa2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 TAX1BP3O14907 124 aa2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 TCL1BO95988 128 aa2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 COX6CP09669 75 aa2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 NDUFV3P56181 108 aaKnown RBP2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 IGFL1Q6UW32 110 aa2.62□□□□□ -1.99
CHMP4A-202ENST00000524955 LST1O00453 97 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 SNCGO76070 127 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 DNAL4O96015 105 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 OCIAD2Q56VL3 154 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 SPAG11AQ6PDA7 123 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 MTURNQ8N3F0 131 aa2.61□□□□□ -1.99
CHMP4A-202ENST00000524955 IGLV7-46A0A075B6I9 117 aa2.6□□□□□ -1.99
CHMP4A-202ENST00000524955 C9orf118A6NHY6 69 aa2.6□□□□□ -1.99
CHMP4A-202ENST00000524955 H3BMG7 143 aa2.6□□□□□ -1.99
CHMP4A-202ENST00000524955 SPINK1P00995 79 aa2.6□□□□□ -1.99
CHMP4A-202ENST00000524955 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
CHMP4A-202ENST00000524955 A0A1B0GX51 115 aa2.59□□□□□ -1.99
CHMP4A-202ENST00000524955 TRACP01848 142 aa2.59□□□□□ -1.99
CHMP4A-202ENST00000524955 BAALC-AS2P0C853 105 aa2.59□□□□□ -1.99
CHMP4A-202ENST00000524955 ATXN8Q156A1 80 aa2.59□□□□□ -1.99
CHMP4A-202ENST00000524955 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 IGLV8-61A0A075B6I0 122 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 A0A1W2PPM0 123 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 C9JAW5 83 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 PPDPFLQ8WWR9 84 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 VPS25Q9BRG1 176 aa2.58□□□□□ -2
CHMP4A-202ENST00000524955 TRBV7-7A0A0K0K1E9 115 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 A0A1W2PNM2 257 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 C9orf92A6NGG3 77 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 TMEM256-PLSCR3K7ERE1 68 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 COL5A1-AS1Q5SY13 56 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 C1orf195Q5TG92 126 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 Q6JHZ5 121 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 LIMD2Q9BT23 127 aa2.57□□□□□ -2
CHMP4A-202ENST00000524955 A0A087WSZ3 146 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
CHMP4A-202ENST00000524955 CD164Q04900 197 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 DEFB116Q30KQ4 102 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 LYRM7Q5U5X0 104 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 CDIP1Q9H305 208 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 SPCS1Q9Y6A9 102 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 LPAP08519 4548 aa2.56□□□□□ -2
CHMP4A-202ENST00000524955 TRBV20-1A0A075B6N2 111 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 CCKP06307 115 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 UBE2V1Q13404 147 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 TEN1Q86WV5 123 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 C14orf132Q9NPU4 83 aa2.55□□□□□ -2
CHMP4A-202ENST00000524955 TRBV7-4A0A0J9YYF1 115 aa2.54□□□□□ -2
CHMP4A-202ENST00000524955 GHRHP01286 108 aa2.54□□□□□ -2
CHMP4A-202ENST00000524955 SMCPP49901 116 aaPredicted RBP2.54□□□□□ -2
CHMP4A-202ENST00000524955 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
CHMP4A-202ENST00000524955 TPRXLQ17RH7 258 aa2.54□□□□□ -2
CHMP4A-202ENST00000524955 FP248Q71RG6 208 aaPredicted RBP2.54□□□□□ -2
CHMP4A-202ENST00000524955 DSCR8Q96T75 97 aa2.54□□□□□ -2
CHMP4A-202ENST00000524955 H3BQ85 93 aa2.53□□□□□ -2
CHMP4A-202ENST00000524955 K7EP34 96 aa2.53□□□□□ -2
CHMP4A-202ENST00000524955 Q5XG85 94 aa2.53□□□□□ -2
CHMP4A-202ENST00000524955 Q96NJ1 140 aa2.53□□□□□ -2
CHMP4A-202ENST00000524955 XP32Q5T750 250 aa2.52□□□□□ -2.01
CHMP4A-202ENST00000524955 Q6Q795 121 aa2.52□□□□□ -2.01
CHMP4A-202ENST00000524955 Q6ZQT0 140 aa2.52□□□□□ -2.01
CHMP4A-202ENST00000524955 SIGMAR1Q99720 223 aa2.52□□□□□ -2.01
CHMP4A-202ENST00000524955 LRP2P98164 4655 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 JMJD7-PLA2G4BH0Y9G9 81 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 H3BT86 120 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 IGKV4-1P06312 121 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 DSCR10P59022 87 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 OBSCN-AS1Q96MR7 158 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
CHMP4A-202ENST00000524955 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
CHMP4A-202ENST00000524955 A0A1B0GV90 55 aa2.5□□□□□ -2.01
CHMP4A-202ENST00000524955 NOTCH2NLQ7Z3S9 236 aa2.5□□□□□ -2.01
CHMP4A-202ENST00000524955 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
CHMP4A-202ENST00000524955 SS18L2Q9UHA2 77 aa2.5□□□□□ -2.01
CHMP4A-202ENST00000524955 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
CHMP4A-202ENST00000524955 GTF2H5Q6ZYL4 71 aa2.49□□□□□ -2.01
CHMP4A-202ENST00000524955 LINC00472Q9H8W2 130 aa2.49□□□□□ -2.01
CHMP4A-202ENST00000524955 IGHV6-1A0A0B4J1U7 121 aa2.48□□□□□ -2.01
CHMP4A-202ENST00000524955 ETDBQ3ZM63 59 aa2.48□□□□□ -2.01
CHMP4A-202ENST00000524955 NREPQ16612 68 aa2.47□□□□□ -2.01
CHMP4A-202ENST00000524955 A0A1B0GVX0 72 aa2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 F8W1H4 67 aa2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 PDE6GP18545 87 aa2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 LINC00313P59037 77 aa2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 SEC61BP60468 96 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms