RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 Q6ZR54 194 aa6.07□□□□□ -1.44
CTNND1-210ENST00000524630 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
CTNND1-210ENST00000524630 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
CTNND1-210ENST00000524630 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
CTNND1-210ENST00000524630 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-210ENST00000524630 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
CTNND1-210ENST00000524630 A6NN06 94 aa6.04□□□□□ -1.44
CTNND1-210ENST00000524630 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
CTNND1-210ENST00000524630 CHD9Q3L8U1 2897 aa6.03□□□□□ -1.44
CTNND1-210ENST00000524630 BRCA2P51587 3418 aa6.03□□□□□ -1.44
CTNND1-210ENST00000524630 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
CTNND1-210ENST00000524630 CFAP54Q96N23 3096 aa6.01□□□□□ -1.45
CTNND1-210ENST00000524630 F8P00451 2351 aa5.99□□□□□ -1.45
CTNND1-210ENST00000524630 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
CTNND1-210ENST00000524630 FASNP49327 2511 aaKnown RBP5.99□□□□□ -1.45
CTNND1-210ENST00000524630 DNAH14Q0VDD8 3507 aa5.96□□□□□ -1.46
CTNND1-210ENST00000524630 PANO1I0J062 215 aa5.95□□□□□ -1.46
CTNND1-210ENST00000524630 TRANK1O15050 2925 aa5.94□□□□□ -1.46
CTNND1-210ENST00000524630 LCE6AA0A183 80 aa5.94□□□□□ -1.46
CTNND1-210ENST00000524630 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CTNND1-210ENST00000524630 A0A087X002 238 aa5.93□□□□□ -1.46
CTNND1-210ENST00000524630 A8MU10 97 aa5.93□□□□□ -1.46
CTNND1-210ENST00000524630 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
CTNND1-210ENST00000524630 KRTAP10-1P60331 282 aa5.93□□□□□ -1.46
CTNND1-210ENST00000524630 LAMA2P24043 3122 aaKnown RBP5.93□□□□□ -1.46
CTNND1-210ENST00000524630 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
CTNND1-210ENST00000524630 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
CTNND1-210ENST00000524630 R4GN34 69 aa5.91□□□□□ -1.46
CTNND1-210ENST00000524630 TRIOO75962 3097 aa5.91□□□□□ -1.46
CTNND1-210ENST00000524630 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.47
CTNND1-210ENST00000524630 FLNAP21333 2647 aaKnown RBP5.89□□□□□ -1.47
CTNND1-210ENST00000524630 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
CTNND1-210ENST00000524630 LAMA3Q16787 3333 aa5.88□□□□□ -1.47
CTNND1-210ENST00000524630 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
CTNND1-210ENST00000524630 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
CTNND1-210ENST00000524630 M0R2T5 61 aa5.87□□□□□ -1.47
CTNND1-210ENST00000524630 M0QZ58 72 aa5.85□□□□□ -1.47
CTNND1-210ENST00000524630 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
CTNND1-210ENST00000524630 CELSR3Q9NYQ7 3312 aa5.84□□□□□ -1.47
CTNND1-210ENST00000524630 ITPR3Q14573 2671 aa5.84□□□□□ -1.47
CTNND1-210ENST00000524630 Q5VSD8 79 aa5.84□□□□□ -1.48
CTNND1-210ENST00000524630 UNC80Q8N2C7 3258 aa5.82□□□□□ -1.48
CTNND1-210ENST00000524630 EPG5Q9HCE0 2579 aa5.82□□□□□ -1.48
CTNND1-210ENST00000524630 MGAQ8IWI9 3026 aa5.81□□□□□ -1.48
CTNND1-210ENST00000524630 RANBP2P49792 3224 aaKnown RBP5.81□□□□□ -1.48
CTNND1-210ENST00000524630 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
CTNND1-210ENST00000524630 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
CTNND1-210ENST00000524630 USP24Q9UPU5 2620 aa5.75□□□□□ -1.49
CTNND1-210ENST00000524630 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
CTNND1-210ENST00000524630 SZT2Q5T011 3432 aa5.74□□□□□ -1.49
CTNND1-210ENST00000524630 Q6ZRN7 208 aaPredicted RBP5.73□□□□□ -1.49
CTNND1-210ENST00000524630 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
CTNND1-210ENST00000524630 HECTD1Q9ULT8 2610 aa5.73□□□□□ -1.49
CTNND1-210ENST00000524630 AKAP13Q12802 2813 aa5.71□□□□□ -1.49
CTNND1-210ENST00000524630 ATRQ13535 2644 aa5.71□□□□□ -1.5
CTNND1-210ENST00000524630 COL6A3P12111 3177 aa5.71□□□□□ -1.5
CTNND1-210ENST00000524630 FRYQ5TBA9 3013 aa5.7□□□□□ -1.5
CTNND1-210ENST00000524630 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
CTNND1-210ENST00000524630 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
CTNND1-210ENST00000524630 VCANP13611 3396 aa5.7□□□□□ -1.5
CTNND1-210ENST00000524630 WDFY4Q6ZS81 3184 aa5.7□□□□□ -1.5
CTNND1-210ENST00000524630 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
CTNND1-210ENST00000524630 LAMA1P25391 3075 aa5.69□□□□□ -1.5
CTNND1-210ENST00000524630 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
CTNND1-210ENST00000524630 A8MUU9 505 aa5.67□□□□□ -1.5
CTNND1-210ENST00000524630 CHD6Q8TD26 2715 aa5.67□□□□□ -1.5
CTNND1-210ENST00000524630 SPTBN5Q9NRC6 3674 aaKnown RBP5.65□□□□□ -1.5
CTNND1-210ENST00000524630 C20orf166-AS1Q96NR2 134 aa5.64□□□□□ -1.51
CTNND1-210ENST00000524630 MGAM2Q2M2H8 2515 aa5.64□□□□□ -1.51
CTNND1-210ENST00000524630 CFAP46Q8IYW2 2715 aa5.63□□□□□ -1.51
CTNND1-210ENST00000524630 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
CTNND1-210ENST00000524630 FREM2Q5SZK8 3169 aa5.62□□□□□ -1.51
CTNND1-210ENST00000524630 KALRNO60229 2985 aa5.61□□□□□ -1.51
CTNND1-210ENST00000524630 DSPP15924 2871 aaKnown RBP5.59□□□□□ -1.52
CTNND1-210ENST00000524630 LRBAP50851 2863 aa5.58□□□□□ -1.52
CTNND1-210ENST00000524630 HELZ2Q9BYK8 2649 aaKnown RBP5.57□□□□□ -1.52
CTNND1-210ENST00000524630 REV3LO60673 3130 aa5.57□□□□□ -1.52
CTNND1-210ENST00000524630 MAST4O15021 2626 aa5.55□□□□□ -1.52
CTNND1-210ENST00000524630 NBEAL2Q6ZNJ1 2754 aa5.54□□□□□ -1.52
CTNND1-210ENST00000524630 ZNF292O60281 2723 aa5.54□□□□□ -1.52
CTNND1-210ENST00000524630 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
CTNND1-210ENST00000524630 TEX15Q9BXT5 2789 aa5.53□□□□□ -1.52
CTNND1-210ENST00000524630 UNC79Q9P2D8 2635 aa5.52□□□□□ -1.53
CTNND1-210ENST00000524630 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
CTNND1-210ENST00000524630 H0YAA0 97 aa5.51□□□□□ -1.53
CTNND1-210ENST00000524630 ZZEF1O43149 2961 aa5.5□□□□□ -1.53
CTNND1-210ENST00000524630 FRYLO94915 3013 aa5.5□□□□□ -1.53
CTNND1-210ENST00000524630 CENPEQ02224 2701 aa5.5□□□□□ -1.53
CTNND1-210ENST00000524630 NBEAL1Q6ZS30 2694 aa5.49□□□□□ -1.53
CTNND1-210ENST00000524630 SETXQ7Z333 2677 aaKnown RBP5.46□□□□□ -1.53
CTNND1-210ENST00000524630 TEP1Q99973 2627 aaKnown RBP5.46□□□□□ -1.54
CTNND1-210ENST00000524630 KMT2BQ9UMN6 2715 aaPredicted RBP5.46□□□□□ -1.54
CTNND1-210ENST00000524630 SPEGQ15772 3267 aa5.46□□□□□ -1.54
CTNND1-210ENST00000524630 NBEAQ8NFP9 2946 aa5.45□□□□□ -1.54
CTNND1-210ENST00000524630 BOD1L1Q8NFC6 3051 aa5.45□□□□□ -1.54
CTNND1-210ENST00000524630 TNP1P09430 55 aa5.43□□□□□ -1.54
CTNND1-210ENST00000524630 FLNBO75369 2602 aaKnown RBP5.42□□□□□ -1.54
CTNND1-210ENST00000524630 ADGRG4Q8IZF6 3080 aa5.41□□□□□ -1.54
CTNND1-210ENST00000524630 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-210ENST00000524630 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms