RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
NPAS4-202ENST00000524617 KRTAP13-1Q8IUC0 172 aa4.77□□□□□ -1.65
NPAS4-202ENST00000524617 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
NPAS4-202ENST00000524617 KCNQ1DNQ9H478 68 aa4.77□□□□□ -1.65
NPAS4-202ENST00000524617 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
NPAS4-202ENST00000524617 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
NPAS4-202ENST00000524617 BCE1O60756 84 aa4.76□□□□□ -1.65
NPAS4-202ENST00000524617 ACYP1P07311 99 aa4.76□□□□□ -1.65
NPAS4-202ENST00000524617 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
NPAS4-202ENST00000524617 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
NPAS4-202ENST00000524617 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
NPAS4-202ENST00000524617 PSMB2P49721 201 aa4.75□□□□□ -1.65
NPAS4-202ENST00000524617 REG3GQ6UW15 175 aa4.75□□□□□ -1.65
NPAS4-202ENST00000524617 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
NPAS4-202ENST00000524617 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
NPAS4-202ENST00000524617 ZNF861PO60384 105 aa4.74□□□□□ -1.65
NPAS4-202ENST00000524617 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
NPAS4-202ENST00000524617 SCGB1C2P0DMR2 95 aa4.74□□□□□ -1.65
NPAS4-202ENST00000524617 Q6ZVQ6 151 aa4.74□□□□□ -1.65
NPAS4-202ENST00000524617 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
NPAS4-202ENST00000524617 TRAV23DV6A0A075B6W5 121 aa4.73□□□□□ -1.65
NPAS4-202ENST00000524617 ZNF73O43830 326 aaPredicted RBP4.73□□□□□ -1.65
NPAS4-202ENST00000524617 S100A7L2Q5SY68 101 aa4.73□□□□□ -1.65
NPAS4-202ENST00000524617 LCA10Q71F78 164 aa4.73□□□□□ -1.65
NPAS4-202ENST00000524617 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
NPAS4-202ENST00000524617 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
NPAS4-202ENST00000524617 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
NPAS4-202ENST00000524617 RPL28P46779 137 aaKnown RBP4.72□□□□□ -1.65
NPAS4-202ENST00000524617 FP248Q71RG6 208 aaPredicted RBP4.72□□□□□ -1.65
NPAS4-202ENST00000524617 LST1O00453 97 aa4.71□□□□□ -1.66
NPAS4-202ENST00000524617 SMCPP49901 116 aaPredicted RBP4.71□□□□□ -1.66
NPAS4-202ENST00000524617 DIRC1Q969H9 104 aa4.71□□□□□ -1.66
NPAS4-202ENST00000524617 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 hADV29S1A0JD25 119 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 A8MUN3 132 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 PSPHP1O15172 72 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 UBE2AP49459 152 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 PRLHP81277 87 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 Q6ZRX8 168 aa4.7□□□□□ -1.66
NPAS4-202ENST00000524617 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 ETDCA0A1B0GVM5 59 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
NPAS4-202ENST00000524617 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 CFC1P0CG37 223 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 FXYD2P54710 66 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 MP68P56378 58 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 ELOF1P60002 83 aaKnown RBP4.69□□□□□ -1.66
NPAS4-202ENST00000524617 SMCR5Q8TEV8 140 aa4.69□□□□□ -1.66
NPAS4-202ENST00000524617 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
NPAS4-202ENST00000524617 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
NPAS4-202ENST00000524617 LINC00643Q86TS7 51 aa4.68□□□□□ -1.66
NPAS4-202ENST00000524617 Q9BRP9 147 aa4.68□□□□□ -1.66
NPAS4-202ENST00000524617 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
NPAS4-202ENST00000524617 NDUFC1O43677 76 aa4.67□□□□□ -1.66
NPAS4-202ENST00000524617 C6orf99Q4VX62 202 aa4.67□□□□□ -1.66
NPAS4-202ENST00000524617 SMIM11BQ8TCY0 68 aa4.67□□□□□ -1.66
NPAS4-202ENST00000524617 FLG2Q5D862 2391 aaPredicted RBP4.66□□□□□ -1.66
NPAS4-202ENST00000524617 LRP1Q07954 4544 aaKnown RBP4.66□□□□□ -1.66
NPAS4-202ENST00000524617 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 COX7BP24311 80 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 CXCL6P80162 114 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 HIGD2AQ9BW72 106 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 DHRS4-AS1Q9P1J3 65 aa4.65□□□□□ -1.67
NPAS4-202ENST00000524617 ERC2-IT1O76042 136 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 FAM229BQ4G0N7 80 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
NPAS4-202ENST00000524617 PRO1854Q9UHT4 67 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 ZNF706Q9Y5V0 76 aaPredicted RBP4.64□□□□□ -1.67
NPAS4-202ENST00000524617 TNXBP22105 4242 aa4.64□□□□□ -1.67
NPAS4-202ENST00000524617 LINC00313P59037 77 aa4.63□□□□□ -1.67
NPAS4-202ENST00000524617 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
NPAS4-202ENST00000524617 K7ERJ3 54 aa4.62□□□□□ -1.67
NPAS4-202ENST00000524617 CCKP06307 115 aa4.62□□□□□ -1.67
NPAS4-202ENST00000524617 A0A087X002 238 aa4.61□□□□□ -1.67
NPAS4-202ENST00000524617 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
NPAS4-202ENST00000524617 SPRR1BP22528 89 aa4.61□□□□□ -1.67
NPAS4-202ENST00000524617 KRTAP13-2Q52LG2 175 aa4.61□□□□□ -1.67
NPAS4-202ENST00000524617 LINC00575Q6W349 94 aa4.61□□□□□ -1.67
NPAS4-202ENST00000524617 IGLV5-48A0A075B6I7 105 aa4.6□□□□□ -1.67
NPAS4-202ENST00000524617 H7C2G1 150 aa4.6□□□□□ -1.67
NPAS4-202ENST00000524617 SLC25A20O43772 301 aa4.6□□□□□ -1.67
NPAS4-202ENST00000524617 H0YGX0 51 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 LINC01547P58512 204 aaPredicted RBP4.59□□□□□ -1.67
NPAS4-202ENST00000524617 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 Q1RN00 199 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 Q1T7F1 81 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 ST20-AS1Q8NBB2 130 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 ANAPC11Q9NYG5 84 aa4.59□□□□□ -1.67
NPAS4-202ENST00000524617 A0A1B0GW54 56 aa4.58□□□□□ -1.68
NPAS4-202ENST00000524617 ASB16-AS1Q495Z4 193 aa4.58□□□□□ -1.68
NPAS4-202ENST00000524617 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
NPAS4-202ENST00000524617 FAM218AQ96MZ4 157 aa4.58□□□□□ -1.68
NPAS4-202ENST00000524617 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
NPAS4-202ENST00000524617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms