RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 A0A0G2JND7 137 aa2.18□□□□□ -2.06
NPM1-212ENST00000524204 LCE6AA0A183 80 aa2.18□□□□□ -2.06
NPM1-212ENST00000524204 A0A1W2PPM0 123 aa2.18□□□□□ -2.06
NPM1-212ENST00000524204 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
NPM1-212ENST00000524204 CSMD3Q7Z407 3707 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.17□□□□□ -2.06
NPM1-212ENST00000524204 MRPL33O75394 65 aaKnown RBP2.17□□□□□ -2.06
NPM1-212ENST00000524204 NMBP08949 121 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 PMCHL1Q16048 86 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 CDC42SE2Q9NRR3 84 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 TMEM14BQ9NUH8 114 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 DOCK11Q5JSL3 2073 aa2.17□□□□□ -2.06
NPM1-212ENST00000524204 TMEM14DPA8MWL7 114 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 NCR3O14931 201 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 SMIM11AP58511 58 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 DEFB112Q30KQ8 113 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 SFTA2Q6UW10 78 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
NPM1-212ENST00000524204 ZCCHC13Q8WW36 166 aaKnown RBP2.16□□□□□ -2.06
NPM1-212ENST00000524204 FRAS1Q86XX4 4008 aa2.15□□□□□ -2.06
NPM1-212ENST00000524204 DNAH10Q8IVF4 4471 aa2.15□□□□□ -2.07
NPM1-212ENST00000524204 TRBV30A0A0K0K1B3 111 aa2.15□□□□□ -2.07
NPM1-212ENST00000524204 CCL18P55774 89 aa2.15□□□□□ -2.07
NPM1-212ENST00000524204 BAGE3Q86Y29 109 aa2.15□□□□□ -2.07
NPM1-212ENST00000524204 AMELXQ99217 191 aa2.15□□□□□ -2.07
NPM1-212ENST00000524204 H7BZZ5 65 aa2.14□□□□□ -2.07
NPM1-212ENST00000524204 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
NPM1-212ENST00000524204 TRBV25-1A0A075B6N4 114 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 A0A087WTM6 91 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 CTXND1A0A1B0GTU2 59 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 F8VRH5 84 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 HMGN2P05204 90 aaKnown RBP2.13□□□□□ -2.07
NPM1-212ENST00000524204 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 LINC00575Q6W349 94 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 ARL2-SNX15V9GYD0 113 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 DNAH11Q96DT5 4516 aa2.13□□□□□ -2.07
NPM1-212ENST00000524204 KMT2AQ03164 3969 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 IGLC7A0M8Q6 106 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 M0R135 149 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 BCE1O60756 84 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 SAA2P0DJI9 122 aaPredicted RBP2.12□□□□□ -2.07
NPM1-212ENST00000524204 ADIRFQ15847 76 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 TDRG1Q3Y452 100 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 C10orf99Q6UWK7 81 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 RPS27LQ71UM5 84 aaKnown RBP2.12□□□□□ -2.07
NPM1-212ENST00000524204 HERC1Q15751 4861 aa2.12□□□□□ -2.07
NPM1-212ENST00000524204 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
NPM1-212ENST00000524204 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
NPM1-212ENST00000524204 ZNF815PA8K554 130 aa2.11□□□□□ -2.07
NPM1-212ENST00000524204 DEFB121Q5J5C9 76 aa2.11□□□□□ -2.07
NPM1-212ENST00000524204 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
NPM1-212ENST00000524204 SPCS1Q9Y6A9 102 aa2.11□□□□□ -2.07
NPM1-212ENST00000524204 ALMS1Q8TCU4 4167 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 VPS13DQ5THJ4 4388 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 UQCR11O14957 56 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 ACYP2P14621 99 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 PSMG4Q5JS54 123 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 ST20Q9HBF5 79 aa2.1□□□□□ -2.07
NPM1-212ENST00000524204 FAT2Q9NYQ8 4349 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 TRGV1A0A0A0MS02 117 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 TRAV1-2A0A0B4J238 106 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 KANTRA0A1W2PQU2 76 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 ALKAL2Q6UX46 152 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 FAM223AQ8IWN6 122 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 SMIM4Q8WVI0 70 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 KAAG1Q9UBP8 84 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.07
NPM1-212ENST00000524204 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 COX17Q14061 63 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 SPINK13Q1W4C9 94 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 ETDBQ3ZM63 59 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 Q96NJ1 140 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 HIGD1BQ9P298 99 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 DNAH2Q9P225 4427 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 DNAH17Q9UFH2 4485 aa2.08□□□□□ -2.08
NPM1-212ENST00000524204 SORL1Q92673 2214 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 HSPG2P98160 4391 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 A0A1B0GWA3 101 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 FAM223BA6NKX1 122 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 F2Z2F3 143 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 PKHD1P08F94 4074 aa2.07□□□□□ -2.08
NPM1-212ENST00000524204 IQCF6A8MYZ5 107 aa2.06□□□□□ -2.08
NPM1-212ENST00000524204 H3BUX3 64 aa2.06□□□□□ -2.08
NPM1-212ENST00000524204 M0R1W7 72 aa2.06□□□□□ -2.08
NPM1-212ENST00000524204 MGPP08493 103 aa2.06□□□□□ -2.08
NPM1-212ENST00000524204 RPL38P63173 70 aaKnown RBP2.05□□□□□ -2.08
NPM1-212ENST00000524204 DMBT1Q9UGM3 2413 aaPredicted RBP2.05□□□□□ -2.08
NPM1-212ENST00000524204 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 ACYP1P07311 99 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 HMGN3Q15651 99 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 NMSQ5H8A3 153 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 CFAP126Q5VTH2 177 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
NPM1-212ENST00000524204 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.08
NPM1-212ENST00000524204 F8WEM9 126 aa2.03□□□□□ -2.08
NPM1-212ENST00000524204 M0R3E3 92 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms