RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 HERVK_113P63121 156 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 PRLHP81277 87 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 AMELXQ99217 191 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 NXT2Q9NPJ8 142 aaKnown RBP3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 CDKN2A-AS1Q9UH64 79 aa3.01□□□□□ -1.93
CTNNA1-239ENST00000523685 TRBV20-1A0A075B6N2 111 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 TRAV12-1A0A0B4J245 112 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 PLNP26678 52 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 TPRXLQ17RH7 258 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 Q8N8P6 123 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 SPANXDQ9BXN6 97 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 TMEM126AQ9H061 195 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 PPDPFQ9H3Y8 114 aa3□□□□□ -1.93
CTNNA1-239ENST00000523685 MYMXA0A1B0GTQ4 84 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 IGIPA6NJ69 53 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 CXCL5P42830 114 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 FAM229BQ4G0N7 80 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 ORMDL2Q53FV1 153 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 C3orf22Q8N5N4 141 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 COX7B2Q8TF08 81 aa2.99□□□□□ -1.93
CTNNA1-239ENST00000523685 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 SNCGO76070 127 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 IFITM1P13164 125 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 PFN2P35080 140 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 ANKRD29Q8N6D5 301 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 SCGB3A1Q96QR1 104 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 TTTY13Q9BZ97 58 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 SPANXCQ9NY87 97 aa2.98□□□□□ -1.93
CTNNA1-239ENST00000523685 TRBV7-7A0A0K0K1E9 115 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 A0A1B0GX51 115 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 K7EMI3 77 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 C5orf47Q569G3 176 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 TIMM17AQ99595 171 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 HIGD2AQ9BW72 106 aa2.97□□□□□ -1.93
CTNNA1-239ENST00000523685 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 A8MU10 97 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 TCL1BO95988 128 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 DAND5Q8N907 189 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 TOMM6Q96B49 74 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 PLEKHB2Q96CS7 222 aa2.96□□□□□ -1.94
CTNNA1-239ENST00000523685 A0A0B4J2C4 111 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 LINC01549A6NIU2 74 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 H3BT86 120 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 M0R378 163 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 SCGB1C2P0DMR2 95 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 PSMB2P49721 201 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 SPAG11AQ6PDA7 123 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 SND1-IT1Q9HBX3 110 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
CTNNA1-239ENST00000523685 TRBV10-2A0A0K0K1G8 114 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 J3KT08 172 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 SLC25A20O43772 301 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 HERVK_113P61574 105 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 FP248Q71RG6 208 aaPredicted RBP2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 Q8NDZ9 215 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 SPRR4Q96PI1 79 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 IMUPQ9GZP8 106 aa2.94□□□□□ -1.94
CTNNA1-239ENST00000523685 LOC107984156A0A0G2JMH3 177 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 ZNF815PA8K554 130 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 PMVKQ15126 192 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 ATXN8Q156A1 80 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 MEIG1Q5JSS6 88 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 ARL17AQ8IVW1 177 aa2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 ZNF706Q9Y5V0 76 aaPredicted RBP2.93□□□□□ -1.94
CTNNA1-239ENST00000523685 UQCRQO14949 82 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 ACYP1P07311 99 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 LINC00158P58513 81 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 SCGB1D4Q6XE38 83 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 PRO1854Q9UHT4 67 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 NDUFA12Q9UI09 145 aa2.92□□□□□ -1.94
CTNNA1-239ENST00000523685 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 C9JAW5 83 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 NCR3O14931 201 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 SPINK1P00995 79 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 ZNF22P17026 224 aaPredicted RBP2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 COX17Q14061 63 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 OR13C6PQ8NH95 151 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 SMCR5Q8TEV8 140 aa2.91□□□□□ -1.94
CTNNA1-239ENST00000523685 FAM236AA0A1B0GUQ0 79 aa2.9□□□□□ -1.95
CTNNA1-239ENST00000523685 FAM236BA0A1B0GV22 79 aa2.9□□□□□ -1.95
CTNNA1-239ENST00000523685 ETDCA0A1B0GVM5 59 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms