RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
CSMD1-212ENST00000523387 TNP2Q05952 138 aa5.75□□□□□ -1.49
CSMD1-212ENST00000523387 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
CSMD1-212ENST00000523387 Q5VV11 94 aa5.75□□□□□ -1.49
CSMD1-212ENST00000523387 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
CSMD1-212ENST00000523387 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-212ENST00000523387 C14orf177Q52M58 125 aa5.74□□□□□ -1.49
CSMD1-212ENST00000523387 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
CSMD1-212ENST00000523387 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
CSMD1-212ENST00000523387 SPRR1AP35321 89 aa5.74□□□□□ -1.49
CSMD1-212ENST00000523387 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
CSMD1-212ENST00000523387 IGLV5-37A0A075B6J1 123 aa5.74□□□□□ -1.49
CSMD1-212ENST00000523387 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
CSMD1-212ENST00000523387 ZFHX3Q15911 3703 aa5.73□□□□□ -1.49
CSMD1-212ENST00000523387 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
CSMD1-212ENST00000523387 LCE6AA0A183 80 aa5.73□□□□□ -1.49
CSMD1-212ENST00000523387 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
CSMD1-212ENST00000523387 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.49
CSMD1-212ENST00000523387 C16orf90A8MZG2 172 aa5.71□□□□□ -1.5
CSMD1-212ENST00000523387 ITPR2Q14571 2701 aa5.71□□□□□ -1.5
CSMD1-212ENST00000523387 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
CSMD1-212ENST00000523387 CSMD2Q7Z408 3487 aa5.7□□□□□ -1.5
CSMD1-212ENST00000523387 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-212ENST00000523387 A8MU10 97 aa5.7□□□□□ -1.5
CSMD1-212ENST00000523387 CNBPP62633 177 aaKnown RBP5.7□□□□□ -1.5
CSMD1-212ENST00000523387 HIVEP1P15822 2718 aa5.69□□□□□ -1.5
CSMD1-212ENST00000523387 HELZ2Q9BYK8 2649 aaKnown RBP5.69□□□□□ -1.5
CSMD1-212ENST00000523387 KRTAP10-11P60412 298 aa5.68□□□□□ -1.5
CSMD1-212ENST00000523387 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
CSMD1-212ENST00000523387 MAST4O15021 2626 aa5.67□□□□□ -1.5
CSMD1-212ENST00000523387 VPS13CQ709C8 3753 aa5.67□□□□□ -1.5
CSMD1-212ENST00000523387 Q75L30 129 aa5.66□□□□□ -1.5
CSMD1-212ENST00000523387 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CSMD1-212ENST00000523387 FLNBO75369 2602 aaKnown RBP5.66□□□□□ -1.5
CSMD1-212ENST00000523387 MOBPQ13875 183 aa5.66□□□□□ -1.5
CSMD1-212ENST00000523387 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.5
CSMD1-212ENST00000523387 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.51
CSMD1-212ENST00000523387 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.51
CSMD1-212ENST00000523387 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-212ENST00000523387 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-212ENST00000523387 COL6A5A8TX70 2615 aa5.64□□□□□ -1.51
CSMD1-212ENST00000523387 MGAM2Q2M2H8 2515 aa5.63□□□□□ -1.51
CSMD1-212ENST00000523387 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
CSMD1-212ENST00000523387 IGLV8-61A0A075B6I0 122 aa5.62□□□□□ -1.51
CSMD1-212ENST00000523387 RETNLBQ9BQ08 111 aa5.62□□□□□ -1.51
CSMD1-212ENST00000523387 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
CSMD1-212ENST00000523387 LINC00472Q9H8W2 130 aa5.62□□□□□ -1.51
CSMD1-212ENST00000523387 LCA10Q71F78 164 aa5.62□□□□□ -1.51
CSMD1-212ENST00000523387 MRPL34Q9BQ48 92 aaKnown RBP5.62□□□□□ -1.51
CSMD1-212ENST00000523387 VWFP04275 2813 aa5.61□□□□□ -1.51
CSMD1-212ENST00000523387 ACYP2P14621 99 aa5.6□□□□□ -1.51
CSMD1-212ENST00000523387 PRR26Q8N8Z3 221 aa5.6□□□□□ -1.51
CSMD1-212ENST00000523387 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
CSMD1-212ENST00000523387 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
CSMD1-212ENST00000523387 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.51
CSMD1-212ENST00000523387 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
CSMD1-212ENST00000523387 STAB1Q9NY15 2570 aa5.59□□□□□ -1.51
CSMD1-212ENST00000523387 A0A1B0GU69 56 aa5.59□□□□□ -1.51
CSMD1-212ENST00000523387 NSD1Q96L73 2696 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-212ENST00000523387 SPINK7P58062 85 aa5.58□□□□□ -1.52
CSMD1-212ENST00000523387 NBEAL1Q6ZS30 2694 aa5.56□□□□□ -1.52
CSMD1-212ENST00000523387 MDFIQ99750 246 aa5.56□□□□□ -1.52
CSMD1-212ENST00000523387 HRES1P13985 223 aa5.56□□□□□ -1.52
CSMD1-212ENST00000523387 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
CSMD1-212ENST00000523387 SPRR1BP22528 89 aa5.55□□□□□ -1.52
CSMD1-212ENST00000523387 TENM3Q9P273 2699 aa5.53□□□□□ -1.52
CSMD1-212ENST00000523387 KRTAP24-1Q3LI83 254 aa5.53□□□□□ -1.52
CSMD1-212ENST00000523387 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
CSMD1-212ENST00000523387 TENM1Q9UKZ4 2725 aa5.52□□□□□ -1.53
CSMD1-212ENST00000523387 A6NN06 94 aa5.52□□□□□ -1.53
CSMD1-212ENST00000523387 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
CSMD1-212ENST00000523387 PKD1L1Q8TDX9 2849 aa5.51□□□□□ -1.53
CSMD1-212ENST00000523387 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
CSMD1-212ENST00000523387 SPINK1P00995 79 aa5.5□□□□□ -1.53
CSMD1-212ENST00000523387 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
CSMD1-212ENST00000523387 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
CSMD1-212ENST00000523387 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
CSMD1-212ENST00000523387 LINC00313P59037 77 aa5.48□□□□□ -1.53
CSMD1-212ENST00000523387 NBDYA0A0U1RRE5 68 aa5.48□□□□□ -1.53
CSMD1-212ENST00000523387 UQCR11O14957 56 aa5.48□□□□□ -1.53
CSMD1-212ENST00000523387 K7EIL1 84 aa5.47□□□□□ -1.53
CSMD1-212ENST00000523387 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
CSMD1-212ENST00000523387 Q6ZR54 194 aa5.47□□□□□ -1.53
CSMD1-212ENST00000523387 PDZD2O15018 2839 aa5.46□□□□□ -1.53
CSMD1-212ENST00000523387 C4orf48Q5BLP8 95 aa5.46□□□□□ -1.54
CSMD1-212ENST00000523387 FAM229AH3BQW9 127 aa5.46□□□□□ -1.54
CSMD1-212ENST00000523387 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
CSMD1-212ENST00000523387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-212ENST00000523387 ZNF861PO60384 105 aa5.44□□□□□ -1.54
CSMD1-212ENST00000523387 STAB2Q8WWQ8 2551 aa5.43□□□□□ -1.54
CSMD1-212ENST00000523387 A0A087X002 238 aa5.43□□□□□ -1.54
CSMD1-212ENST00000523387 IGLV5-52A0A0A0MRZ9 124 aa5.43□□□□□ -1.54
CSMD1-212ENST00000523387 NOTCH2NLQ7Z3S9 236 aa5.43□□□□□ -1.54
CSMD1-212ENST00000523387 RTL8CO15255 209 aa5.43□□□□□ -1.54
CSMD1-212ENST00000523387 NUPR2A6NF83 97 aa5.42□□□□□ -1.54
CSMD1-212ENST00000523387 PANO1I0J062 215 aa5.42□□□□□ -1.54
CSMD1-212ENST00000523387 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
CSMD1-212ENST00000523387 APLNQ9ULZ1 77 aa5.4□□□□□ -1.54
CSMD1-212ENST00000523387 Q96NJ1 140 aa5.4□□□□□ -1.54
CSMD1-212ENST00000523387 WWC2-AS2Q96NR7 200 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms