RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
CTNNA1-235ENST00000522730 TAX1BP3O14907 124 aa5.83□□□□□ -1.48
CTNNA1-235ENST00000522730 MOBPQ13875 183 aa5.83□□□□□ -1.48
CTNNA1-235ENST00000522730 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 TRIAP1O43715 76 aa5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 PSMB2P49721 201 aa5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 NAA38Q9BRA0 125 aaKnown RBP5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 Q9BRP9 147 aa5.81□□□□□ -1.48
CTNNA1-235ENST00000522730 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 TRBV7-6A0A0J9YX20 115 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 H3BUT2 72 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 SPINK1P00995 79 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 COX7BP24311 80 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
CTNNA1-235ENST00000522730 VAMP3Q15836 100 aa5.79□□□□□ -1.48
CTNNA1-235ENST00000522730 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
CTNNA1-235ENST00000522730 Q6ZRX8 168 aa5.79□□□□□ -1.48
CTNNA1-235ENST00000522730 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
CTNNA1-235ENST00000522730 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
CTNNA1-235ENST00000522730 COX6CP09669 75 aa5.78□□□□□ -1.48
CTNNA1-235ENST00000522730 SCGB1C2P0DMR2 95 aa5.78□□□□□ -1.48
CTNNA1-235ENST00000522730 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
CTNNA1-235ENST00000522730 ST20-AS1Q8NBB2 130 aa5.78□□□□□ -1.48
CTNNA1-235ENST00000522730 H0YGX0 51 aa5.77□□□□□ -1.49
CTNNA1-235ENST00000522730 A0A1W2PPM0 123 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 FAM218AQ96MZ4 157 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
CTNNA1-235ENST00000522730 SLC25A20O43772 301 aa5.75□□□□□ -1.49
CTNNA1-235ENST00000522730 FABP2P12104 132 aa5.75□□□□□ -1.49
CTNNA1-235ENST00000522730 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
CTNNA1-235ENST00000522730 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
CTNNA1-235ENST00000522730 Q8N377 158 aa5.74□□□□□ -1.49
CTNNA1-235ENST00000522730 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
CTNNA1-235ENST00000522730 A0A1B0GX51 115 aa5.73□□□□□ -1.49
CTNNA1-235ENST00000522730 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-235ENST00000522730 TCL1BO95988 128 aa5.73□□□□□ -1.49
CTNNA1-235ENST00000522730 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
CTNNA1-235ENST00000522730 LST1O00453 97 aa5.72□□□□□ -1.49
CTNNA1-235ENST00000522730 ATXN8Q156A1 80 aa5.72□□□□□ -1.49
CTNNA1-235ENST00000522730 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
CTNNA1-235ENST00000522730 SPCS1Q9Y6A9 102 aa5.72□□□□□ -1.49
CTNNA1-235ENST00000522730 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
CTNNA1-235ENST00000522730 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
CTNNA1-235ENST00000522730 SNCGO76070 127 aa5.71□□□□□ -1.5
CTNNA1-235ENST00000522730 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-235ENST00000522730 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
CTNNA1-235ENST00000522730 TRACP01848 142 aa5.7□□□□□ -1.5
CTNNA1-235ENST00000522730 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-235ENST00000522730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-235ENST00000522730 K7EP34 96 aa5.69□□□□□ -1.5
CTNNA1-235ENST00000522730 Q6ZQY7 126 aa5.69□□□□□ -1.5
CTNNA1-235ENST00000522730 LAMTOR3Q9UHA4 124 aa5.69□□□□□ -1.5
CTNNA1-235ENST00000522730 A0A1B0GV90 55 aa5.68□□□□□ -1.5
CTNNA1-235ENST00000522730 DNAL4O96015 105 aa5.68□□□□□ -1.5
CTNNA1-235ENST00000522730 LINC01547P58512 204 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-235ENST00000522730 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
CTNNA1-235ENST00000522730 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
CTNNA1-235ENST00000522730 H3BMG7 143 aa5.67□□□□□ -1.5
CTNNA1-235ENST00000522730 GTF2H5Q6ZYL4 71 aa5.67□□□□□ -1.5
CTNNA1-235ENST00000522730 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
CTNNA1-235ENST00000522730 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
CTNNA1-235ENST00000522730 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
CTNNA1-235ENST00000522730 TEX49A0A1B0GTD5 131 aa5.65□□□□□ -1.5
CTNNA1-235ENST00000522730 C9JAW5 83 aa5.65□□□□□ -1.5
CTNNA1-235ENST00000522730 SPRR1BP22528 89 aa5.65□□□□□ -1.5
CTNNA1-235ENST00000522730 LIMD2Q9BT23 127 aa5.65□□□□□ -1.5
CTNNA1-235ENST00000522730 H3BQ85 93 aa5.64□□□□□ -1.51
CTNNA1-235ENST00000522730 BAALC-AS2P0C853 105 aa5.64□□□□□ -1.51
CTNNA1-235ENST00000522730 MTURNQ8N3F0 131 aa5.64□□□□□ -1.51
CTNNA1-235ENST00000522730 PPDPFLQ8WWR9 84 aa5.64□□□□□ -1.51
CTNNA1-235ENST00000522730 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
CTNNA1-235ENST00000522730 TMEM256-PLSCR3K7ERE1 68 aa5.63□□□□□ -1.51
CTNNA1-235ENST00000522730 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
CTNNA1-235ENST00000522730 PRO0461Q9UI25 63 aa5.62□□□□□ -1.51
CTNNA1-235ENST00000522730 H3BT86 120 aa5.61□□□□□ -1.51
CTNNA1-235ENST00000522730 UBE2V1Q13404 147 aa5.61□□□□□ -1.51
CTNNA1-235ENST00000522730 PCOTHQ58A44 107 aa5.61□□□□□ -1.51
CTNNA1-235ENST00000522730 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
CTNNA1-235ENST00000522730 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
CTNNA1-235ENST00000522730 NDUFV3P56181 108 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-235ENST00000522730 F8W1H4 67 aa5.58□□□□□ -1.52
CTNNA1-235ENST00000522730 CD164Q04900 197 aa5.58□□□□□ -1.52
CTNNA1-235ENST00000522730 F8WEM9 126 aa5.57□□□□□ -1.52
CTNNA1-235ENST00000522730 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
CTNNA1-235ENST00000522730 A0A1B0GV72 72 aa5.56□□□□□ -1.52
CTNNA1-235ENST00000522730 C1orf195Q5TG92 126 aa5.56□□□□□ -1.52
CTNNA1-235ENST00000522730 JMJD7-PLA2G4BH0Y9G9 81 aa5.54□□□□□ -1.52
CTNNA1-235ENST00000522730 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-235ENST00000522730 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
CTNNA1-235ENST00000522730 Q6JHZ5 121 aa5.53□□□□□ -1.52
CTNNA1-235ENST00000522730 IGFL1Q6UW32 110 aa5.52□□□□□ -1.53
CTNNA1-235ENST00000522730 TEN1Q86WV5 123 aa5.52□□□□□ -1.53
CTNNA1-235ENST00000522730 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 ETDBQ3ZM63 59 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms