RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 APLNQ9ULZ1 77 aa8.78□□□□□ -1
SYNPO-205ENST00000522122 TEX15Q9BXT5 2789 aa8.77□□□□□ -1
SYNPO-205ENST00000522122 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1.01
SYNPO-205ENST00000522122 TNRC18O15417 2968 aaPredicted RBP8.76□□□□□ -1.01
SYNPO-205ENST00000522122 UNC79Q9P2D8 2635 aa8.74□□□□□ -1.01
SYNPO-205ENST00000522122 IGLV7-43P04211 117 aa8.74□□□□□ -1.01
SYNPO-205ENST00000522122 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
SYNPO-205ENST00000522122 WDFY3Q8IZQ1 3526 aa8.73□□□□□ -1.01
SYNPO-205ENST00000522122 STAB1Q9NY15 2570 aa8.73□□□□□ -1.01
SYNPO-205ENST00000522122 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
SYNPO-205ENST00000522122 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
SYNPO-205ENST00000522122 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SYNPO-205ENST00000522122 SPRR1AP35321 89 aa8.69□□□□□ -1.02
SYNPO-205ENST00000522122 Q1T7F1 81 aa8.69□□□□□ -1.02
SYNPO-205ENST00000522122 ZZEF1O43149 2961 aa8.69□□□□□ -1.02
SYNPO-205ENST00000522122 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
SYNPO-205ENST00000522122 NOTCH1P46531 2555 aa8.68□□□□□ -1.02
SYNPO-205ENST00000522122 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
SYNPO-205ENST00000522122 BOD1L1Q8NFC6 3051 aa8.66□□□□□ -1.02
SYNPO-205ENST00000522122 COL6A5A8TX70 2615 aa8.65□□□□□ -1.03
SYNPO-205ENST00000522122 NBEAL2Q6ZNJ1 2754 aa8.64□□□□□ -1.03
SYNPO-205ENST00000522122 NBEAL1Q6ZS30 2694 aa8.64□□□□□ -1.03
SYNPO-205ENST00000522122 ADGRG4Q8IZF6 3080 aa8.63□□□□□ -1.03
SYNPO-205ENST00000522122 LRBAP50851 2863 aa8.63□□□□□ -1.03
SYNPO-205ENST00000522122 J3QL48 77 aa8.6□□□□□ -1.03
SYNPO-205ENST00000522122 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
SYNPO-205ENST00000522122 UBR5O95071 2799 aaPredicted RBP8.6□□□□□ -1.03
SYNPO-205ENST00000522122 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
SYNPO-205ENST00000522122 CD164Q04900 197 aa8.59□□□□□ -1.03
SYNPO-205ENST00000522122 KTN1-AS1Q86SY8 53 aa8.59□□□□□ -1.03
SYNPO-205ENST00000522122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
SYNPO-205ENST00000522122 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
SYNPO-205ENST00000522122 TNP2Q05952 138 aa8.58□□□□□ -1.04
SYNPO-205ENST00000522122 CDC42SE1Q9NRR8 79 aa8.58□□□□□ -1.04
SYNPO-205ENST00000522122 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
SYNPO-205ENST00000522122 KALRNO60229 2985 aa8.58□□□□□ -1.04
SYNPO-205ENST00000522122 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
SYNPO-205ENST00000522122 IGSF10Q6WRI0 2623 aa8.56□□□□□ -1.04
SYNPO-205ENST00000522122 HRNRQ86YZ3 2850 aaPredicted RBP8.54□□□□□ -1.04
SYNPO-205ENST00000522122 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
SYNPO-205ENST00000522122 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
SYNPO-205ENST00000522122 Q8N1X5 172 aa8.53□□□□□ -1.04
SYNPO-205ENST00000522122 LOC400499M0QZD8 3231 aa8.53□□□□□ -1.04
SYNPO-205ENST00000522122 LCA10Q71F78 164 aa8.51□□□□□ -1.05
SYNPO-205ENST00000522122 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
SYNPO-205ENST00000522122 SPRR1BP22528 89 aa8.51□□□□□ -1.05
SYNPO-205ENST00000522122 DMDP11532 3685 aa8.49□□□□□ -1.05
SYNPO-205ENST00000522122 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
SYNPO-205ENST00000522122 TACC2O95359 2948 aa8.49□□□□□ -1.05
SYNPO-205ENST00000522122 LINC00472Q9H8W2 130 aa8.48□□□□□ -1.05
SYNPO-205ENST00000522122 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
SYNPO-205ENST00000522122 HRES1P13985 223 aa8.47□□□□□ -1.05
SYNPO-205ENST00000522122 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
SYNPO-205ENST00000522122 Q75L30 129 aa8.45□□□□□ -1.06
SYNPO-205ENST00000522122 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
SYNPO-205ENST00000522122 DMXL2Q8TDJ6 3036 aa8.44□□□□□ -1.06
SYNPO-205ENST00000522122 FLNCQ14315 2725 aa8.44□□□□□ -1.06
SYNPO-205ENST00000522122 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
SYNPO-205ENST00000522122 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
SYNPO-205ENST00000522122 DMXL1Q9Y485 3027 aa8.42□□□□□ -1.06
SYNPO-205ENST00000522122 LCE6AA0A183 80 aa8.42□□□□□ -1.06
SYNPO-205ENST00000522122 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
SYNPO-205ENST00000522122 ATMQ13315 3056 aa8.42□□□□□ -1.06
SYNPO-205ENST00000522122 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
SYNPO-205ENST00000522122 ITPR1Q14643 2758 aa8.4□□□□□ -1.06
SYNPO-205ENST00000522122 Q5VV11 94 aa8.39□□□□□ -1.07
SYNPO-205ENST00000522122 NSD1Q96L73 2696 aaPredicted RBP8.38□□□□□ -1.07
SYNPO-205ENST00000522122 COX6B2Q6YFQ2 88 aa8.38□□□□□ -1.07
SYNPO-205ENST00000522122 STAB2Q8WWQ8 2551 aa8.37□□□□□ -1.07
SYNPO-205ENST00000522122 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
SYNPO-205ENST00000522122 A0A0D9SG42 100 aa8.35□□□□□ -1.07
SYNPO-205ENST00000522122 COL12A1Q99715 3063 aa8.34□□□□□ -1.07
SYNPO-205ENST00000522122 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
SYNPO-205ENST00000522122 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
SYNPO-205ENST00000522122 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
SYNPO-205ENST00000522122 SMG1Q96Q15 3661 aaKnown RBP8.32□□□□□ -1.08
SYNPO-205ENST00000522122 Q5W150 140 aa8.32□□□□□ -1.08
SYNPO-205ENST00000522122 A0A1B0GU33 70 aa8.31□□□□□ -1.08
SYNPO-205ENST00000522122 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
SYNPO-205ENST00000522122 ASH1LQ9NR48 2969 aaKnown RBP8.28□□□□□ -1.08
SYNPO-205ENST00000522122 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
SYNPO-205ENST00000522122 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
SYNPO-205ENST00000522122 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
SYNPO-205ENST00000522122 SPINK7P58062 85 aa8.25□□□□□ -1.09
SYNPO-205ENST00000522122 Q6ZR54 194 aa8.25□□□□□ -1.09
SYNPO-205ENST00000522122 ASPMQ8IZT6 3477 aa8.23□□□□□ -1.09
SYNPO-205ENST00000522122 DCHS1Q96JQ0 3298 aa8.22□□□□□ -1.09
SYNPO-205ENST00000522122 PANO1I0J062 215 aa8.21□□□□□ -1.1
SYNPO-205ENST00000522122 UTP20O75691 2785 aaKnown RBP8.21□□□□□ -1.1
SYNPO-205ENST00000522122 LAMA5O15230 3695 aa8.19□□□□□ -1.1
SYNPO-205ENST00000522122 CFAP47Q6ZTR5 3102 aa8.19□□□□□ -1.1
SYNPO-205ENST00000522122 Q6ZSA8 131 aa8.18□□□□□ -1.1
SYNPO-205ENST00000522122 BSNQ9UPA5 3926 aa8.17□□□□□ -1.1
SYNPO-205ENST00000522122 CSMD1Q96PZ7 3565 aa8.17□□□□□ -1.1
SYNPO-205ENST00000522122 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
SYNPO-205ENST00000522122 PRAC1Q96KF2 57 aa8.17□□□□□ -1.1
SYNPO-205ENST00000522122 DCHS2Q6V1P9 2916 aa8.16□□□□□ -1.1
SYNPO-205ENST00000522122 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
SYNPO-205ENST00000522122 APCP25054 2843 aa8.15□□□□□ -1.11
SYNPO-205ENST00000522122 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms