RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	LIMD2	Q9BT23	127 aa		4.72	□□□□□ -1.65
CTNNA1-231	ENST00000521941	HSD52	Q0P140	79 aa		4.71	□□□□□ -1.66
CTNNA1-231	ENST00000521941	UQCR10	Q9UDW1	63 aa		4.71	□□□□□ -1.66
CTNNA1-231	ENST00000521941	PRO1854	Q9UHT4	67 aa		4.71	□□□□□ -1.66
CTNNA1-231	ENST00000521941		K7ERJ3	54 aa		4.7	□□□□□ -1.66
CTNNA1-231	ENST00000521941	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.7	□□□□□ -1.66
CTNNA1-231	ENST00000521941	FAM218A	Q96MZ4	157 aa		4.69	□□□□□ -1.66
CTNNA1-231	ENST00000521941	TRIAP1	O43715	76 aa		4.68	□□□□□ -1.66
CTNNA1-231	ENST00000521941	KRTAP13-3	Q3SY46	172 aa		4.68	□□□□□ -1.66
CTNNA1-231	ENST00000521941		H0YGX0	51 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941	SNCG	O76070	127 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941	PSMB2	P49721	201 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941	CD164	Q04900	197 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941	CLEC2B	Q92478	149 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941	SNHG12	Q9BXW3	62 aa		4.67	□□□□□ -1.66
CTNNA1-231	ENST00000521941		H3BUT2	72 aa		4.66	□□□□□ -1.66
CTNNA1-231	ENST00000521941	IGFL1	Q6UW32	110 aa		4.66	□□□□□ -1.66
CTNNA1-231	ENST00000521941	C9orf92	A6NGG3	77 aa		4.65	□□□□□ -1.67
CTNNA1-231	ENST00000521941		A0A1B0GV72	72 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941	DNAL4	O96015	105 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941	FABP2	P12104	132 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941	OCIAD2	Q56VL3	154 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941		Q6JHZ5	121 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941	PPDPFL	Q8WWR9	84 aa		4.64	□□□□□ -1.67
CTNNA1-231	ENST00000521941	IGLV8-61	A0A075B6I0	122 aa		4.63	□□□□□ -1.67
CTNNA1-231	ENST00000521941	TCL1B	O95988	128 aa		4.63	□□□□□ -1.67
CTNNA1-231	ENST00000521941	SMIM6	P0DI80	62 aa		4.63	□□□□□ -1.67
CTNNA1-231	ENST00000521941	RNF213	Q63HN8	5207 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941	TRBV7-7	A0A0K0K1E9	115 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941		A0A1B0GX51	115 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941	COX6C	P09669	75 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941	NDUFV3	P56181	108 aa	Known RBP	4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941	XP32	Q5T750	250 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941	C1orf195	Q5TG92	126 aa		4.62	□□□□□ -1.67
CTNNA1-231	ENST00000521941		Q5XG85	94 aa		4.61	□□□□□ -1.67
CTNNA1-231	ENST00000521941		H3BMG7	143 aa		4.6	□□□□□ -1.67
CTNNA1-231	ENST00000521941	SCGB1C2	P0DMR2	95 aa		4.6	□□□□□ -1.67
CTNNA1-231	ENST00000521941	ORMDL1	Q9P0S3	153 aa		4.6	□□□□□ -1.67
CTNNA1-231	ENST00000521941	MUC17	Q685J3	4493 aa		4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941		A0A0U1RQV1	116 aa		4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941		M0R143	59 aa		4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941	GHRH	P01286	108 aa		4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941	SEC61B	P60468	96 aa	Known RBP	4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941	NAA38	Q9BRA0	125 aa	Known RBP	4.59	□□□□□ -1.67
CTNNA1-231	ENST00000521941	TSTD3	H0UI37	97 aa		4.58	□□□□□ -1.68
CTNNA1-231	ENST00000521941	BATF	Q16520	125 aa		4.58	□□□□□ -1.68
CTNNA1-231	ENST00000521941	ASB16-AS1	Q495Z4	193 aa		4.58	□□□□□ -1.68
CTNNA1-231	ENST00000521941	LOC105371267	A0A1B0GV96	52 aa		4.57	□□□□□ -1.68
CTNNA1-231	ENST00000521941		A0A087WSZ3	146 aa		4.56	□□□□□ -1.68
CTNNA1-231	ENST00000521941	LST1	O00453	97 aa		4.56	□□□□□ -1.68
CTNNA1-231	ENST00000521941	TEN1	Q86WV5	123 aa		4.56	□□□□□ -1.68
CTNNA1-231	ENST00000521941	SS18L2	Q9UHA2	77 aa		4.56	□□□□□ -1.68
CTNNA1-231	ENST00000521941	TMEM256-PLSCR3	K7ERE1	68 aa		4.55	□□□□□ -1.68
CTNNA1-231	ENST00000521941	TRAC	P01848	142 aa		4.55	□□□□□ -1.68
CTNNA1-231	ENST00000521941	ANKRD29	Q8N6D5	301 aa		4.55	□□□□□ -1.68
CTNNA1-231	ENST00000521941		A0A1W2PNM2	257 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941		H3BQ85	93 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941	PCOTH	Q58A44	107 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941		Q6Q795	121 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941	VPS25	Q9BRG1	176 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941	KRTAP4-1	Q9BYQ7	146 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941	MUC2	Q02817	5179 aa		4.54	□□□□□ -1.68
CTNNA1-231	ENST00000521941	CCK	P06307	115 aa		4.52	□□□□□ -1.69
CTNNA1-231	ENST00000521941	UBE2V1	Q13404	147 aa		4.52	□□□□□ -1.69
CTNNA1-231	ENST00000521941	OBSCN-AS1	Q96MR7	158 aa		4.52	□□□□□ -1.69
CTNNA1-231	ENST00000521941	SIGMAR1	Q99720	223 aa		4.52	□□□□□ -1.69
CTNNA1-231	ENST00000521941	BAALC-AS2	P0C853	105 aa		4.51	□□□□□ -1.69
CTNNA1-231	ENST00000521941	ATXN8	Q156A1	80 aa		4.51	□□□□□ -1.69
CTNNA1-231	ENST00000521941	RPL37	P61927	97 aa	Known RBP	4.5	□□□□□ -1.69
CTNNA1-231	ENST00000521941	TRBV7-4	A0A0J9YYF1	115 aa		4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941	RBM3	P98179	157 aa	Known RBP	4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941	DEFB116	Q30KQ4	102 aa		4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941	LYRM7	Q5U5X0	104 aa		4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941		Q96NJ1	140 aa		4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941	DSCR8	Q96T75	97 aa		4.49	□□□□□ -1.69
CTNNA1-231	ENST00000521941	IGKV4-1	P06312	121 aa		4.48	□□□□□ -1.69
CTNNA1-231	ENST00000521941		C9JAW5	83 aa		4.47	□□□□□ -1.69
CTNNA1-231	ENST00000521941	DSCR10	P59022	87 aa		4.47	□□□□□ -1.69
CTNNA1-231	ENST00000521941	MTURN	Q8N3F0	131 aa		4.46	□□□□□ -1.7
CTNNA1-231	ENST00000521941	C9orf118	A6NHY6	69 aa		4.45	□□□□□ -1.7
CTNNA1-231	ENST00000521941	TAX1BP3	O14907	124 aa		4.45	□□□□□ -1.7
CTNNA1-231	ENST00000521941	TRBV20-1	A0A075B6N2	111 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941		A0A1W2PPM0	123 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	LCE2A	Q5TA79	106 aa	Predicted RBP	4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	ATP11AUN	Q6ZP68	121 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941		Q75L30	129 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	C14orf132	Q9NPU4	83 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	FAT4	Q6V0I7	4981 aa		4.44	□□□□□ -1.7
CTNNA1-231	ENST00000521941	IGHV6-1	A0A0B4J1U7	121 aa		4.43	□□□□□ -1.7
CTNNA1-231	ENST00000521941		Q6ZQT0	140 aa		4.42	□□□□□ -1.7
CTNNA1-231	ENST00000521941	LINC00472	Q9H8W2	130 aa		4.42	□□□□□ -1.7
CTNNA1-231	ENST00000521941	LINC00313	P59037	77 aa		4.41	□□□□□ -1.7
CTNNA1-231	ENST00000521941	C20orf166-AS1	Q96NR2	134 aa		4.41	□□□□□ -1.7
CTNNA1-231	ENST00000521941	LOC110117498	A0A087WWA1	95 aa		4.4	□□□□□ -1.71
CTNNA1-231	ENST00000521941	NOTCH2NL	Q7Z3S9	236 aa		4.4	□□□□□ -1.71
CTNNA1-231	ENST00000521941	SPCS1	Q9Y6A9	102 aa		4.4	□□□□□ -1.71
CTNNA1-231	ENST00000521941	PCP4L1	A6NKN8	68 aa		4.39	□□□□□ -1.71
CTNNA1-231	ENST00000521941		A8MUU9	505 aa		4.39	□□□□□ -1.71
CTNNA1-231	ENST00000521941		H3BT86	120 aa		4.39	□□□□□ -1.71

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