RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
UBR5-207ENST00000520539 SMR3AQ99954 134 aa9.82□□□□□ -0.84
UBR5-207ENST00000520539 A0A087X002 238 aa9.8□□□□□ -0.84
UBR5-207ENST00000520539 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
UBR5-207ENST00000520539 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
UBR5-207ENST00000520539 ZNF292O60281 2723 aa9.78□□□□□ -0.84
UBR5-207ENST00000520539 A0A087WTM6 91 aa9.78□□□□□ -0.84
UBR5-207ENST00000520539 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
UBR5-207ENST00000520539 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
UBR5-207ENST00000520539 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
UBR5-207ENST00000520539 M0R2T5 61 aa9.71□□□□□ -0.85
UBR5-207ENST00000520539 Q5W150 140 aa9.71□□□□□ -0.85
UBR5-207ENST00000520539 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
UBR5-207ENST00000520539 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
UBR5-207ENST00000520539 KRTAP25-1Q3LHN0 102 aa9.67□□□□□ -0.86
UBR5-207ENST00000520539 ITPR1Q14643 2758 aa9.67□□□□□ -0.86
UBR5-207ENST00000520539 A0A1W2PPR1 153 aa9.65□□□□□ -0.86
UBR5-207ENST00000520539 SPATA8Q6RVD6 105 aa9.65□□□□□ -0.86
UBR5-207ENST00000520539 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
UBR5-207ENST00000520539 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
UBR5-207ENST00000520539 Q6ZR54 194 aa9.6□□□□□ -0.87
UBR5-207ENST00000520539 M0QZ58 72 aa9.6□□□□□ -0.87
UBR5-207ENST00000520539 A6NN06 94 aa9.58□□□□□ -0.88
UBR5-207ENST00000520539 UBR5O95071 2799 aaPredicted RBP9.58□□□□□ -0.88
UBR5-207ENST00000520539 LINC00472Q9H8W2 130 aa9.58□□□□□ -0.88
UBR5-207ENST00000520539 NDUFAF8A1L188 74 aa9.57□□□□□ -0.88
UBR5-207ENST00000520539 C10orf142B7Z368 130 aa9.56□□□□□ -0.88
UBR5-207ENST00000520539 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
UBR5-207ENST00000520539 PANO1I0J062 215 aa9.53□□□□□ -0.88
UBR5-207ENST00000520539 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
UBR5-207ENST00000520539 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
UBR5-207ENST00000520539 SPRR1BP22528 89 aa9.47□□□□□ -0.89
UBR5-207ENST00000520539 A0A096LNT2 108 aa9.47□□□□□ -0.89
UBR5-207ENST00000520539 SPRR1AP35321 89 aa9.45□□□□□ -0.9
UBR5-207ENST00000520539 Q8NDZ9 215 aa9.45□□□□□ -0.9
UBR5-207ENST00000520539 OXTP01178 125 aa9.44□□□□□ -0.9
UBR5-207ENST00000520539 K7EIL1 84 aa9.39□□□□□ -0.91
UBR5-207ENST00000520539 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
UBR5-207ENST00000520539 KRTAP24-1Q3LI83 254 aa9.38□□□□□ -0.91
UBR5-207ENST00000520539 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
UBR5-207ENST00000520539 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
UBR5-207ENST00000520539 ADM2Q7Z4H4 148 aa9.37□□□□□ -0.91
UBR5-207ENST00000520539 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
UBR5-207ENST00000520539 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
UBR5-207ENST00000520539 LRBAP50851 2863 aa9.31□□□□□ -0.92
UBR5-207ENST00000520539 KRTAP26-1Q6PEX3 210 aa9.27□□□□□ -0.93
UBR5-207ENST00000520539 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
UBR5-207ENST00000520539 TNP1P09430 55 aa9.18□□□□□ -0.94
UBR5-207ENST00000520539 KRTAP29-1A8MX34 341 aaPredicted RBP9.17□□□□□ -0.94
UBR5-207ENST00000520539 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
UBR5-207ENST00000520539 KALRNO60229 2985 aa9.17□□□□□ -0.94
UBR5-207ENST00000520539 RPS29P62273 56 aaKnown RBP9.16□□□□□ -0.94
UBR5-207ENST00000520539 LCE6AA0A183 80 aa9.15□□□□□ -0.94
UBR5-207ENST00000520539 A8MUU9 505 aa9.15□□□□□ -0.95
UBR5-207ENST00000520539 TRANK1O15050 2925 aa9.14□□□□□ -0.95
UBR5-207ENST00000520539 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
UBR5-207ENST00000520539 CHD9Q3L8U1 2897 aa9.11□□□□□ -0.95
UBR5-207ENST00000520539 NF1P21359 2839 aa9.08□□□□□ -0.96
UBR5-207ENST00000520539 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
UBR5-207ENST00000520539 FLNCQ14315 2725 aa9.05□□□□□ -0.96
UBR5-207ENST00000520539 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
UBR5-207ENST00000520539 TENM1Q9UKZ4 2725 aa9.04□□□□□ -0.96
UBR5-207ENST00000520539 DSPP15924 2871 aaKnown RBP9.03□□□□□ -0.96
UBR5-207ENST00000520539 HIVEP1P15822 2718 aa9□□□□□ -0.97
UBR5-207ENST00000520539 TGP01266 2768 aa8.97□□□□□ -0.97
UBR5-207ENST00000520539 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
UBR5-207ENST00000520539 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.986e-7■■□□□ 12.1
UBR5-207ENST00000520539 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
UBR5-207ENST00000520539 SRCAPQ6ZRS2 3230 aa8.92□□□□□ -0.98
UBR5-207ENST00000520539 A8MU10 97 aa8.9□□□□□ -0.98
UBR5-207ENST00000520539 Q5VSD8 79 aa8.88□□□□□ -0.99
UBR5-207ENST00000520539 DNAH12Q6ZR08 3092 aa8.87□□□□□ -0.99
UBR5-207ENST00000520539 PDZD2O15018 2839 aa8.85□□□□□ -0.99
UBR5-207ENST00000520539 P0C880 135 aa8.85□□□□□ -0.99
UBR5-207ENST00000520539 KRTAP10-3P60369 221 aa8.85□□□□□ -0.99
UBR5-207ENST00000520539 A0A0C4DFX4 3053 aa8.83□□□□□ -1
UBR5-207ENST00000520539 FRYLO94915 3013 aa8.78□□□□□ -1
UBR5-207ENST00000520539 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1
UBR5-207ENST00000520539 CHD7Q9P2D1 2997 aa8.77□□□□□ -1.01
UBR5-207ENST00000520539 PCNTO95613 3336 aa8.75□□□□□ -1.01
UBR5-207ENST00000520539 CFAP54Q96N23 3096 aa8.72□□□□□ -1.01
UBR5-207ENST00000520539 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
UBR5-207ENST00000520539 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
UBR5-207ENST00000520539 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
UBR5-207ENST00000520539 TRIOO75962 3097 aa8.59□□□□□ -1.03
UBR5-207ENST00000520539 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
UBR5-207ENST00000520539 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
UBR5-207ENST00000520539 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
UBR5-207ENST00000520539 KRTAP1-1Q07627 177 aa8.53□□□□□ -1.04
UBR5-207ENST00000520539 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
UBR5-207ENST00000520539 H0YAA0 97 aa8.51□□□□□ -1.05
UBR5-207ENST00000520539 CRYBG3Q68DQ2 2970 aa8.48□□□□□ -1.05
UBR5-207ENST00000520539 MGAQ8IWI9 3026 aa8.47□□□□□ -1.05
UBR5-207ENST00000520539 FRYQ5TBA9 3013 aa8.46□□□□□ -1.05
UBR5-207ENST00000520539 TNRC18O15417 2968 aaPredicted RBP8.45□□□□□ -1.06
UBR5-207ENST00000520539 EP400Q96L91 3159 aa8.44□□□□□ -1.06
UBR5-207ENST00000520539 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
UBR5-207ENST00000520539 C5orf42Q9H799 3197 aa8.4□□□□□ -1.07
UBR5-207ENST00000520539 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
UBR5-207ENST00000520539 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms