RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SNCGO76070 127 aa7.93□□□□□ -1.14
VEGFA-221ENST00000520265 CEND1Q8N111 149 aa7.93□□□□□ -1.14
VEGFA-221ENST00000520265 A0A0B4J2C4 111 aa7.92□□□□□ -1.14
VEGFA-221ENST00000520265 CD164Q04900 197 aa7.92□□□□□ -1.14
VEGFA-221ENST00000520265 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
VEGFA-221ENST00000520265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.91□□□□□ -1.14
VEGFA-221ENST00000520265 SNHG12Q9BXW3 62 aa7.9□□□□□ -1.14
VEGFA-221ENST00000520265 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
VEGFA-221ENST00000520265 FXYD2P54710 66 aa7.88□□□□□ -1.15
VEGFA-221ENST00000520265 PRO1854Q9UHT4 67 aa7.88□□□□□ -1.15
VEGFA-221ENST00000520265 H0YGX0 51 aa7.86□□□□□ -1.15
VEGFA-221ENST00000520265 TCL1BO95988 128 aa7.86□□□□□ -1.15
VEGFA-221ENST00000520265 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
VEGFA-221ENST00000520265 HSD52Q0P140 79 aa7.86□□□□□ -1.15
VEGFA-221ENST00000520265 PSMB2P49721 201 aa7.85□□□□□ -1.15
VEGFA-221ENST00000520265 Q6JHZ5 121 aa7.85□□□□□ -1.15
VEGFA-221ENST00000520265 CLEC2BQ92478 149 aa7.85□□□□□ -1.15
VEGFA-221ENST00000520265 H3BUT2 72 aa7.84□□□□□ -1.15
VEGFA-221ENST00000520265 OCIAD2Q56VL3 154 aa7.84□□□□□ -1.15
VEGFA-221ENST00000520265 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
VEGFA-221ENST00000520265 PPDPFLQ8WWR9 84 aa7.84□□□□□ -1.15
VEGFA-221ENST00000520265 K7ERJ3 54 aa7.83□□□□□ -1.16
VEGFA-221ENST00000520265 XP32Q5T750 250 aa7.83□□□□□ -1.16
VEGFA-221ENST00000520265 FAM218AQ96MZ4 157 aa7.83□□□□□ -1.16
VEGFA-221ENST00000520265 UQCR10Q9UDW1 63 aa7.83□□□□□ -1.16
VEGFA-221ENST00000520265 MUC2Q02817 5179 aa7.82□□□□□ -1.16
VEGFA-221ENST00000520265 TRIAP1O43715 76 aa7.81□□□□□ -1.16
VEGFA-221ENST00000520265 FABP2P12104 132 aa7.81□□□□□ -1.16
VEGFA-221ENST00000520265 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
VEGFA-221ENST00000520265 C1orf195Q5TG92 126 aa7.81□□□□□ -1.16
VEGFA-221ENST00000520265 DNAL4O96015 105 aa7.8□□□□□ -1.16
VEGFA-221ENST00000520265 Q5XG85 94 aa7.8□□□□□ -1.16
VEGFA-221ENST00000520265 TRBV7-7A0A0K0K1E9 115 aa7.79□□□□□ -1.16
VEGFA-221ENST00000520265 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
VEGFA-221ENST00000520265 GHRHP01286 108 aa7.78□□□□□ -1.16
VEGFA-221ENST00000520265 A0A1B0GV72 72 aa7.77□□□□□ -1.17
VEGFA-221ENST00000520265 COX6CP09669 75 aa7.77□□□□□ -1.17
VEGFA-221ENST00000520265 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
VEGFA-221ENST00000520265 A0A1B0GX51 115 aa7.75□□□□□ -1.17
VEGFA-221ENST00000520265 H3BMG7 143 aa7.74□□□□□ -1.17
VEGFA-221ENST00000520265 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
VEGFA-221ENST00000520265 SCGB1C2P0DMR2 95 aa7.73□□□□□ -1.17
VEGFA-221ENST00000520265 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
VEGFA-221ENST00000520265 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
VEGFA-221ENST00000520265 LST1O00453 97 aa7.72□□□□□ -1.17
VEGFA-221ENST00000520265 SS18L2Q9UHA2 77 aa7.71□□□□□ -1.18
VEGFA-221ENST00000520265 A0A087WSZ3 146 aa7.69□□□□□ -1.18
VEGFA-221ENST00000520265 TEN1Q86WV5 123 aa7.69□□□□□ -1.18
VEGFA-221ENST00000520265 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
VEGFA-221ENST00000520265 H3BQ85 93 aa7.67□□□□□ -1.18
VEGFA-221ENST00000520265 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
VEGFA-221ENST00000520265 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
VEGFA-221ENST00000520265 M0R143 59 aa7.66□□□□□ -1.18
VEGFA-221ENST00000520265 OBSCN-AS1Q96MR7 158 aa7.66□□□□□ -1.18
VEGFA-221ENST00000520265 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
VEGFA-221ENST00000520265 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
VEGFA-221ENST00000520265 Q6Q795 121 aa7.64□□□□□ -1.19
VEGFA-221ENST00000520265 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
VEGFA-221ENST00000520265 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
VEGFA-221ENST00000520265 VPS25Q9BRG1 176 aa7.62□□□□□ -1.19
VEGFA-221ENST00000520265 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
VEGFA-221ENST00000520265 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
VEGFA-221ENST00000520265 TRACP01848 142 aa7.61□□□□□ -1.19
VEGFA-221ENST00000520265 BATFQ16520 125 aa7.61□□□□□ -1.19
VEGFA-221ENST00000520265 TSTD3H0UI37 97 aa7.6□□□□□ -1.19
VEGFA-221ENST00000520265 CCKP06307 115 aa7.6□□□□□ -1.19
VEGFA-221ENST00000520265 Q96NJ1 140 aa7.6□□□□□ -1.19
VEGFA-221ENST00000520265 UBE2V1Q13404 147 aa7.58□□□□□ -1.2
VEGFA-221ENST00000520265 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
VEGFA-221ENST00000520265 ATP11AUNQ6ZP68 121 aa7.57□□□□□ -1.2
VEGFA-221ENST00000520265 DSCR8Q96T75 97 aa7.57□□□□□ -1.2
VEGFA-221ENST00000520265 TRBV7-4A0A0J9YYF1 115 aa7.56□□□□□ -1.2
VEGFA-221ENST00000520265 IGKV4-1P06312 121 aa7.56□□□□□ -1.2
VEGFA-221ENST00000520265 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
VEGFA-221ENST00000520265 ATXN8Q156A1 80 aa7.56□□□□□ -1.2
VEGFA-221ENST00000520265 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
VEGFA-221ENST00000520265 DSCR10P59022 87 aa7.54□□□□□ -1.2
VEGFA-221ENST00000520265 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
VEGFA-221ENST00000520265 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
VEGFA-221ENST00000520265 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
VEGFA-221ENST00000520265 Q75L30 129 aa7.52□□□□□ -1.21
VEGFA-221ENST00000520265 C9JAW5 83 aa7.5□□□□□ -1.21
VEGFA-221ENST00000520265 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
VEGFA-221ENST00000520265 LINC00313P59037 77 aa7.48□□□□□ -1.21
VEGFA-221ENST00000520265 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
VEGFA-221ENST00000520265 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
VEGFA-221ENST00000520265 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
VEGFA-221ENST00000520265 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
VEGFA-221ENST00000520265 TRBV20-1A0A075B6N2 111 aa7.43□□□□□ -1.22
VEGFA-221ENST00000520265 A8MUU9 505 aa7.42□□□□□ -1.22
VEGFA-221ENST00000520265 M0R2T5 61 aa7.42□□□□□ -1.22
VEGFA-221ENST00000520265 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
VEGFA-221ENST00000520265 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
VEGFA-221ENST00000520265 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
VEGFA-221ENST00000520265 KRTAP19-2Q3LHN2 52 aa7.41□□□□□ -1.22
VEGFA-221ENST00000520265 MT1HP80294 61 aa7.4□□□□□ -1.22
VEGFA-221ENST00000520265 Q6ZQT0 140 aa7.4□□□□□ -1.22
VEGFA-221ENST00000520265 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
VEGFA-221ENST00000520265 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
VEGFA-221ENST00000520265 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms