RNA–Protein interactions for RNA: ENST00000520177.5

G3BP1-208, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 2,700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-208ENST00000520177 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
G3BP1-208ENST00000520177 V9GYY9 64 aa9.41□□□□□ -0.9
G3BP1-208ENST00000520177 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
G3BP1-208ENST00000520177 PRLHP81277 87 aa9.4□□□□□ -0.9
G3BP1-208ENST00000520177 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
G3BP1-208ENST00000520177 STAB1Q9NY15 2570 aa9.4□□□□□ -0.9
G3BP1-208ENST00000520177 MP68P56378 58 aa9.4□□□□□ -0.91
G3BP1-208ENST00000520177 PRR15Q8IV56 129 aa9.4□□□□□ -0.91
G3BP1-208ENST00000520177 NDUFB1O75438 58 aa9.39□□□□□ -0.91
G3BP1-208ENST00000520177 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
G3BP1-208ENST00000520177 A8MUN3 132 aa9.36□□□□□ -0.91
G3BP1-208ENST00000520177 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
G3BP1-208ENST00000520177 FBN1P35555 2871 aaKnown RBP9.35□□□□□ -0.91
G3BP1-208ENST00000520177 B9D2Q9BPU9 175 aa9.35□□□□□ -0.91
G3BP1-208ENST00000520177 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
G3BP1-208ENST00000520177 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
G3BP1-208ENST00000520177 IGLV8-61A0A075B6I0 122 aa9.33□□□□□ -0.92
G3BP1-208ENST00000520177 H0Y9P7 68 aa9.33□□□□□ -0.92
G3BP1-208ENST00000520177 A0A096LNI7 61 aa9.32□□□□□ -0.92
G3BP1-208ENST00000520177 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
G3BP1-208ENST00000520177 NBEAL1Q6ZS30 2694 aa9.32□□□□□ -0.92
G3BP1-208ENST00000520177 CMYA5Q8N3K9 4069 aa9.32□□□□□ -0.92
G3BP1-208ENST00000520177 UBE2AP49459 152 aa9.32□□□□□ -0.92
G3BP1-208ENST00000520177 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
G3BP1-208ENST00000520177 A8MU10 97 aa9.3□□□□□ -0.92
G3BP1-208ENST00000520177 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
G3BP1-208ENST00000520177 SEC61GP60059 68 aa9.29□□□□□ -0.92
G3BP1-208ENST00000520177 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
G3BP1-208ENST00000520177 Q5VV11 94 aa9.28□□□□□ -0.92
G3BP1-208ENST00000520177 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
G3BP1-208ENST00000520177 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
G3BP1-208ENST00000520177 KRTAP11-1Q8IUC1 163 aa9.25□□□□□ -0.93
G3BP1-208ENST00000520177 LYSTQ99698 3801 aa9.25□□□□□ -0.93
G3BP1-208ENST00000520177 A8MWP4 228 aa9.25□□□□□ -0.93
G3BP1-208ENST00000520177 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
G3BP1-208ENST00000520177 CSMD3Q7Z407 3707 aa9.25□□□□□ -0.93
G3BP1-208ENST00000520177 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
G3BP1-208ENST00000520177 H3BPC8 53 aa9.24□□□□□ -0.93
G3BP1-208ENST00000520177 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
G3BP1-208ENST00000520177 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
G3BP1-208ENST00000520177 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
G3BP1-208ENST00000520177 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
G3BP1-208ENST00000520177 DNAH3Q8TD57 4116 aa9.22□□□□□ -0.93
G3BP1-208ENST00000520177 H0Y9J4 135 aa9.21□□□□□ -0.93
G3BP1-208ENST00000520177 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.93
G3BP1-208ENST00000520177 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
G3BP1-208ENST00000520177 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
G3BP1-208ENST00000520177 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
G3BP1-208ENST00000520177 LIMD2Q9BT23 127 aa9.19□□□□□ -0.94
G3BP1-208ENST00000520177 SPRR1BP22528 89 aa9.18□□□□□ -0.94
G3BP1-208ENST00000520177 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
G3BP1-208ENST00000520177 DNAH9Q9NYC9 4486 aa9.16□□□□□ -0.94
G3BP1-208ENST00000520177 COA5Q86WW8 74 aa9.15□□□□□ -0.94
G3BP1-208ENST00000520177 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
G3BP1-208ENST00000520177 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.95
G3BP1-208ENST00000520177 PCOTHQ58A44 107 aa9.14□□□□□ -0.95
G3BP1-208ENST00000520177 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
G3BP1-208ENST00000520177 KRTAP24-1Q3LI83 254 aa9.12□□□□□ -0.95
G3BP1-208ENST00000520177 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
G3BP1-208ENST00000520177 LCA10Q71F78 164 aa9.09□□□□□ -0.95
G3BP1-208ENST00000520177 A6NED7 52 aa9.08□□□□□ -0.96
G3BP1-208ENST00000520177 CD164Q04900 197 aa9.08□□□□□ -0.96
G3BP1-208ENST00000520177 Q75L30 129 aa9.08□□□□□ -0.96
G3BP1-208ENST00000520177 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
G3BP1-208ENST00000520177 Q96NJ1 140 aa9.07□□□□□ -0.96
G3BP1-208ENST00000520177 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
G3BP1-208ENST00000520177 PANO1I0J062 215 aa9.04□□□□□ -0.96
G3BP1-208ENST00000520177 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
G3BP1-208ENST00000520177 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 NDUFS5O43920 106 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 ASB16-AS1Q495Z4 193 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 C14orf177Q52M58 125 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 MGAM2Q2M2H8 2515 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 C8orf17Q9NRJ1 99 aa9.03□□□□□ -0.96
G3BP1-208ENST00000520177 K7EIL1 84 aa9.02□□□□□ -0.97
G3BP1-208ENST00000520177 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
G3BP1-208ENST00000520177 MOBPQ13875 183 aa9.02□□□□□ -0.97
G3BP1-208ENST00000520177 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
G3BP1-208ENST00000520177 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
G3BP1-208ENST00000520177 Q6ZR54 194 aa9□□□□□ -0.97
G3BP1-208ENST00000520177 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
G3BP1-208ENST00000520177 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
G3BP1-208ENST00000520177 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
G3BP1-208ENST00000520177 HRES1P13985 223 aa8.96□□□□□ -0.97
G3BP1-208ENST00000520177 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
G3BP1-208ENST00000520177 A0A087X002 238 aa8.95□□□□□ -0.98
G3BP1-208ENST00000520177 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
G3BP1-208ENST00000520177 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
G3BP1-208ENST00000520177 A6NN06 94 aa8.94□□□□□ -0.98
G3BP1-208ENST00000520177 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
G3BP1-208ENST00000520177 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
G3BP1-208ENST00000520177 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
G3BP1-208ENST00000520177 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
G3BP1-208ENST00000520177 SPINK7P58062 85 aa8.92□□□□□ -0.98
G3BP1-208ENST00000520177 ANAPC11Q9NYG5 84 aa8.91□□□□□ -0.98
G3BP1-208ENST00000520177 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
G3BP1-208ENST00000520177 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
G3BP1-208ENST00000520177 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms