RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 Q6ZSA8 131 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 C9orf62Q8N4C0 152 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 MANBALQ9NQG1 85 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 CDC42SE2Q9NRR3 84 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 V9GYH0 126 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 PLCE1Q9P212 2302 aa1.4□□□□□ -2.19
LINC01339-202ENST00000518436 DYNC1H1Q14204 4646 aaKnown RBP1.4□□□□□ -2.19
LINC01339-202ENST00000518436 HSPG2P98160 4391 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 TRAV22A0A0B4J277 110 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 TRBV7-7A0A0K0K1E9 115 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 CHKB-CPT1BH3BT56 60 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 Q8N6K4 173 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 WFDC9Q8NEX5 89 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 Q96NJ1 140 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 TRGV9Q99603 122 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 PKHD1P08F94 4074 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 SNRNP200O75643 2136 aaKnown RBP1.39□□□□□ -2.19
LINC01339-202ENST00000518436 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
LINC01339-202ENST00000518436 VPS13DQ5THJ4 4388 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 DNAH2Q9P225 4427 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 HMGN4O00479 90 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 MRPL33O75394 65 aaKnown RBP1.38□□□□□ -2.19
LINC01339-202ENST00000518436 TMEM170BQ5T4T1 132 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 SERP2Q8N6R1 65 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
LINC01339-202ENST00000518436 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
LINC01339-202ENST00000518436 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
LINC01339-202ENST00000518436 PRB3Q04118 309 aaPredicted RBP1.37□□□□□ -2.19
LINC01339-202ENST00000518436 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.37□□□□□ -2.19
LINC01339-202ENST00000518436 F2Z2F3 143 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 APOC3P02656 99 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 TRAPPC2P0DI81 140 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 TRAPPC2BP0DI82 140 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 ACYP2P14621 99 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 VMO1Q7Z5L0 202 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 SMIM11BQ8TCY0 68 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 SMIM4Q8WVI0 70 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 CACFD1Q9UGQ2 172 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
LINC01339-202ENST00000518436 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
LINC01339-202ENST00000518436 MYCBP2O75592 4640 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 WNK2Q9Y3S1 2297 aa1.36□□□□□ -2.19
LINC01339-202ENST00000518436 SRRM2Q9UQ35 2752 aaKnown RBP1.35□□□□□ -2.19
LINC01339-202ENST00000518436 PKD1P98161 4303 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 TRGV1A0A0A0MS02 117 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 TMEM14DPA8MWL7 114 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 F8VRH5 84 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 H3BUX3 64 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 M0R135 149 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 UQCR11O14957 56 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 COX17Q14061 63 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 PYY3Q5JQD4 70 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 BAGE2Q86Y30 109 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 NPVFQ9HCQ7 196 aa1.35□□□□□ -2.19
LINC01339-202ENST00000518436 DMBT1Q9UGM3 2413 aaPredicted RBP1.35□□□□□ -2.19
LINC01339-202ENST00000518436 TRAV1-2A0A0B4J238 106 aa1.34□□□□□ -2.19
LINC01339-202ENST00000518436 CTXND1A0A1B0GTU2 59 aa1.34□□□□□ -2.19
LINC01339-202ENST00000518436 IGLC7A0M8Q6 106 aa1.34□□□□□ -2.19
LINC01339-202ENST00000518436 NXT2Q9NPJ8 142 aaKnown RBP1.34□□□□□ -2.19
LINC01339-202ENST00000518436 LINC01558Q9Y6Z2 57 aa1.34□□□□□ -2.19
LINC01339-202ENST00000518436 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.2
LINC01339-202ENST00000518436 DNAH5Q8TE73 4624 aa1.34□□□□□ -2.2
LINC01339-202ENST00000518436 DNAH17Q9UFH2 4485 aa1.33□□□□□ -2.2
LINC01339-202ENST00000518436 H3BSH0 61 aa1.33□□□□□ -2.2
LINC01339-202ENST00000518436 SYS1-DBNDD2H3BUS1 97 aa1.33□□□□□ -2.2
LINC01339-202ENST00000518436 SAA2P0DJI9 122 aaPredicted RBP1.33□□□□□ -2.2
LINC01339-202ENST00000518436 FAUP35544 74 aaKnown RBP1.33□□□□□ -2.2
LINC01339-202ENST00000518436 MUC2Q02817 5179 aa1.33□□□□□ -2.2
LINC01339-202ENST00000518436 FAT1Q14517 4588 aa1.32□□□□□ -2.2
LINC01339-202ENST00000518436 GVQW2A0A096LPI5 108 aaPredicted RBP1.32□□□□□ -2.2
LINC01339-202ENST00000518436 H7BZZ5 65 aa1.32□□□□□ -2.2
LINC01339-202ENST00000518436 DEFB136Q30KP8 78 aa1.32□□□□□ -2.2
LINC01339-202ENST00000518436 CRCT1Q9UGL9 99 aa1.32□□□□□ -2.2
LINC01339-202ENST00000518436 SORL1Q92673 2214 aa1.32□□□□□ -2.2
LINC01339-202ENST00000518436 TRBV25-1A0A075B6N4 114 aa1.31□□□□□ -2.2
LINC01339-202ENST00000518436 BCE1O60756 84 aa1.31□□□□□ -2.2
LINC01339-202ENST00000518436 ARL2-SNX15V9GYD0 113 aa1.31□□□□□ -2.2
LINC01339-202ENST00000518436 DNAH6Q9C0G6 4158 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 A0A0G2JND7 137 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 K7EP34 96 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 MGPP08493 103 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 PMCHL1Q16048 86 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 CFAP126Q5VTH2 177 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 Q6ZRX8 168 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 RABAC1Q9UI14 185 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
LINC01339-202ENST00000518436 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 HMGN2P05204 90 aaKnown RBP1.29□□□□□ -2.2
LINC01339-202ENST00000518436 ZNF137PP52743 207 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 SPINK9Q5DT21 86 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 RPS27LQ71UM5 84 aaKnown RBP1.29□□□□□ -2.2
LINC01339-202ENST00000518436 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 PRO1933Q9H354 126 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 HILPDAQ9Y5L2 63 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
LINC01339-202ENST00000518436 DOCK11Q5JSL3 2073 aa1.28□□□□□ -2.2
LINC01339-202ENST00000518436 LRP2P98164 4655 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms