RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 AEBP2Q6ZN18 517 aaPredicted RBP19.69■□□□□ 0.74
LINC01339-202ENST00000518436 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
LINC01339-202ENST00000518436 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LINC01339-202ENST00000518436 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
LINC01339-202ENST00000518436 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
LINC01339-202ENST00000518436 FOXD1Q16676 465 aa15.5■□□□□ 0.07
LINC01339-202ENST00000518436 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
LINC01339-202ENST00000518436 ADRA2BP18089 450 aa14.92□□□□□ -0.02
LINC01339-202ENST00000518436 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
LINC01339-202ENST00000518436 MSH5O43196 834 aa14.31□□□□□ -0.12
LINC01339-202ENST00000518436 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
LINC01339-202ENST00000518436 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
LINC01339-202ENST00000518436 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
LINC01339-202ENST00000518436 KCNA4P22459 653 aa13.51□□□□□ -0.25
LINC01339-202ENST00000518436 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
LINC01339-202ENST00000518436 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
LINC01339-202ENST00000518436 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
LINC01339-202ENST00000518436 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
LINC01339-202ENST00000518436 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
LINC01339-202ENST00000518436 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
LINC01339-202ENST00000518436 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
LINC01339-202ENST00000518436 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
LINC01339-202ENST00000518436 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
LINC01339-202ENST00000518436 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
LINC01339-202ENST00000518436 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
LINC01339-202ENST00000518436 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
LINC01339-202ENST00000518436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC01339-202ENST00000518436 ZBTB22O15209 634 aa12.44□□□□□ -0.42
LINC01339-202ENST00000518436 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
LINC01339-202ENST00000518436 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
LINC01339-202ENST00000518436 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
LINC01339-202ENST00000518436 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
LINC01339-202ENST00000518436 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
LINC01339-202ENST00000518436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
LINC01339-202ENST00000518436 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
LINC01339-202ENST00000518436 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
LINC01339-202ENST00000518436 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
LINC01339-202ENST00000518436 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
LINC01339-202ENST00000518436 APLP2Q06481 763 aa12.02□□□□□ -0.49
LINC01339-202ENST00000518436 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
LINC01339-202ENST00000518436 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
LINC01339-202ENST00000518436 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
LINC01339-202ENST00000518436 CAPN15O75808 1086 aa11.87□□□□□ -0.51
LINC01339-202ENST00000518436 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
LINC01339-202ENST00000518436 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
LINC01339-202ENST00000518436 DSG3P32926 999 aa11.66□□□□□ -0.54
LINC01339-202ENST00000518436 POLA2Q14181 598 aa11.64□□□□□ -0.55
LINC01339-202ENST00000518436 ABCB7O75027 752 aa11.63□□□□□ -0.55
LINC01339-202ENST00000518436 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
LINC01339-202ENST00000518436 FBLN2P98095 1184 aa11.43□□□□□ -0.58
LINC01339-202ENST00000518436 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
LINC01339-202ENST00000518436 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
LINC01339-202ENST00000518436 FKBP8Q14318 412 aa11.19□□□□□ -0.62
LINC01339-202ENST00000518436 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
LINC01339-202ENST00000518436 SPDYE2BA6NHP3 402 aa11.16□□□□□ -0.62
LINC01339-202ENST00000518436 SPDYE6P0CI01 402 aa11.16□□□□□ -0.62
LINC01339-202ENST00000518436 SPDYE2Q495Y8 402 aa11.16□□□□□ -0.62
LINC01339-202ENST00000518436 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
LINC01339-202ENST00000518436 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
LINC01339-202ENST00000518436 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
LINC01339-202ENST00000518436 PROM2Q8N271 834 aa11□□□□□ -0.65
LINC01339-202ENST00000518436 AKT1S1Q96B36 256 aa11□□□□□ -0.65
LINC01339-202ENST00000518436 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC01339-202ENST00000518436 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
LINC01339-202ENST00000518436 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
LINC01339-202ENST00000518436 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
LINC01339-202ENST00000518436 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
LINC01339-202ENST00000518436 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
LINC01339-202ENST00000518436 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
LINC01339-202ENST00000518436 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
LINC01339-202ENST00000518436 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
LINC01339-202ENST00000518436 CHRDL2Q6WN34 429 aa10.64□□□□□ -0.71
LINC01339-202ENST00000518436 MIER1Q8N108 512 aa10.58□□□□□ -0.72
LINC01339-202ENST00000518436 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
LINC01339-202ENST00000518436 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC01339-202ENST00000518436 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
LINC01339-202ENST00000518436 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
LINC01339-202ENST00000518436 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
LINC01339-202ENST00000518436 IFNLR1Q8IU57 520 aaPredicted RBP10.5□□□□□ -0.73
LINC01339-202ENST00000518436 PRKAR2AP13861 404 aaKnown RBP10.48□□□□□ -0.73
LINC01339-202ENST00000518436 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
LINC01339-202ENST00000518436 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
LINC01339-202ENST00000518436 KLHL34Q8N239 644 aa10.46□□□□□ -0.73
LINC01339-202ENST00000518436 MNX1P50219 401 aaPredicted RBP10.44□□□□□ -0.74
LINC01339-202ENST00000518436 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
LINC01339-202ENST00000518436 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
LINC01339-202ENST00000518436 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC01339-202ENST00000518436 NUBP1P53384 320 aa10.32□□□□□ -0.76
LINC01339-202ENST00000518436 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
LINC01339-202ENST00000518436 POTEHQ6S545 545 aa10.27□□□□□ -0.77
LINC01339-202ENST00000518436 RASEFQ8IZ41 740 aa10.25□□□□□ -0.77
LINC01339-202ENST00000518436 FAM212AQ96EL1 285 aa10.24□□□□□ -0.77
LINC01339-202ENST00000518436 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
LINC01339-202ENST00000518436 GSE1Q14687 1217 aa10.21□□□□□ -0.77
LINC01339-202ENST00000518436 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
LINC01339-202ENST00000518436 DCAF8Q5TAQ9 597 aa10.2□□□□□ -0.78
LINC01339-202ENST00000518436 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
LINC01339-202ENST00000518436 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
LINC01339-202ENST00000518436 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
LINC01339-202ENST00000518436 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms