RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IGLC3P0DOY3 106 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 C9orf116Q5BN46 136 aaPredicted RBP1.72□□□□□ -2.13
SKP1-204ENST00000517691 PYY3Q5JQD4 70 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 Q6ZSA8 131 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 C7orf65Q6ZTY9 151 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 Q8IZM0 81 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 HIST3H2BBQ8N257 126 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 TYMSOSQ8TAI1 123 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 PMCHL2Q9BQD1 86 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 MIEN1Q9BRT3 115 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 C6orf48Q9UBA6 75 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 TRBV30A0A0K0K1B3 111 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 F8VRH5 84 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 ZNF22P17026 224 aaPredicted RBP1.71□□□□□ -2.14
SKP1-204ENST00000517691 PLNP26678 52 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 KRTDAPP60985 99 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 ZNF625Q96I27 306 aaPredicted RBP1.71□□□□□ -2.14
SKP1-204ENST00000517691 HIST1H2BLQ99880 126 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 DNAH11Q96DT5 4516 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 TMEM223A0PJW6 202 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 SYS1-DBNDD2H3BUS1 97 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 SLC25A20O43772 301 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 IGKCP01834 107 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 TMEM258P61165 79 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 Q5VSD8 79 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 TEN1Q86WV5 123 aa1.71□□□□□ -2.14
SKP1-204ENST00000517691 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
SKP1-204ENST00000517691 A0A0B4J2C4 111 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 A0A1B0GW54 56 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 FAM168BA1KXE4 195 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 UQCRQO14949 82 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 LINC00158P58513 81 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 RPL37AP61513 92 aaKnown RBP1.7□□□□□ -2.14
SKP1-204ENST00000517691 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
SKP1-204ENST00000517691 FAM229BQ4G0N7 80 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 DIRC1Q969H9 104 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 XAGE1AQ9HD64 81 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 PLAC8Q9NZF1 115 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 KIAA1109Q2LD37 5005 aa1.7□□□□□ -2.14
SKP1-204ENST00000517691 MYMXA0A1B0GTQ4 84 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 SFTA2Q6UW10 78 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 C2orf91Q6ZV80 131 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 MIR7-3HGQ8N6C7 128 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 DYNC1H1Q14204 4646 aaKnown RBP1.69□□□□□ -2.14
SKP1-204ENST00000517691 DNAH5Q8TE73 4624 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 A8MUU9 505 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 H3BT86 120 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 SMIM13P0DJ93 91 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 IFITM1P13164 125 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 C9orf153Q5TBE3 101 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 LINC01545Q5VT33 79 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 ATOH7Q8N100 152 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 NDUFA12Q9UI09 145 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 RYR1P21817 5038 aa1.69□□□□□ -2.14
SKP1-204ENST00000517691 VPS13BQ7Z7G8 4022 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 PCLOQ9Y6V0 5065 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 LRP1BQ9NZR2 4599 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 RPL28P46779 137 aaKnown RBP1.68□□□□□ -2.14
SKP1-204ENST00000517691 HIST1H4AP62805 103 aaKnown RBP1.68□□□□□ -2.14
SKP1-204ENST00000517691 COX17Q14061 63 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 C1orf64Q8NEQ6 169 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 C22orf24Q9Y442 160 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 HERC2O95714 4834 aa1.68□□□□□ -2.14
SKP1-204ENST00000517691 TRBV20-1A0A075B6N2 111 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 NDUFAF8A1L188 74 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 C1orf137Q5JT78 98 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 PSORS1C2Q9UIG4 136 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 APOBP04114 4563 aaKnown RBP1.67□□□□□ -2.14
SKP1-204ENST00000517691 IGKV2-28A0A075B6P5 120 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 IGKV2D-26A0A0A0MRZ7 120 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 ZNF815PA8K554 130 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 IGKV2D-28P01615 120 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 CRYGAP11844 174 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 KRTAP10-12P60413 245 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 NPC2P61916 151 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 KRTAP7-1Q8IUC3 87 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 CLEC2BQ92478 149 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 LINC00167Q96N53 147 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 DSCR8Q96T75 97 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 HSPG2P98160 4391 aa1.67□□□□□ -2.14
SKP1-204ENST00000517691 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 NCR3O14931 201 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 TIMM17BO60830 172 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 KRTAP11-1Q8IUC1 163 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 Q8NDZ9 215 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 RETNLBQ9BQ08 111 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 VAMP8Q9BV40 100 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 IGLV7-43P04211 117 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
SKP1-204ENST00000517691 SPINK6Q6UWN8 80 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 FP248Q71RG6 208 aaPredicted RBP1.66□□□□□ -2.14
SKP1-204ENST00000517691 SERP1Q9Y6X1 66 aa1.66□□□□□ -2.14
SKP1-204ENST00000517691 BCE1O60756 84 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms