RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 RPS27LQ71UM5 84 aaKnown RBP-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 C20orf78Q9BR46 151 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 RGPD8O14715 1765 aaPredicted RBP-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 RGPD5Q99666 1765 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 DNAH10Q8IVF4 4471 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 MYOM2P54296 1465 aa-0.61□□□□□ -2.51
RNU1-117P-201ENST00000517041 GCN1Q92616 2671 aaKnown RBP-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 NDUFA4O00483 81 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 SFTA3P0C7M3 94 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 LINC00032P0C843 101 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 S100A1P23297 94 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 FAUP35544 74 aaKnown RBP-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 PEA15Q15121 130 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 LEAP2Q969E1 77 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 TMEM203Q969S6 136 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 TSC22D3Q99576 134 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 NUP188Q5SRE5 1749 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 NWD1Q149M9 1564 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 TOPAZ1Q8N9V7 1692 aa-0.62□□□□□ -2.51
RNU1-117P-201ENST00000517041 KALRNO60229 2985 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 KIAA0586Q9BVV6 1533 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 TIAM2Q8IVF5 1701 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 REV3LO60673 3130 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 BTAF1O14981 1849 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 MYMXA0A1B0GTQ4 84 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 CEBPZOSA8MTT3 80 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 UMAD1C9J7I0 102 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 MRPS10P82664 201 aaKnown RBP-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 NCBP2-AS2Q69YL0 99 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 C6orf48Q9UBA6 75 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 ATP10BO94823 1461 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 PZPP20742 1482 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 ERVK-7P63135 1459 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 NCOA2Q15596 1464 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 EIF4G3O43432 1585 aaKnown RBP-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 C5P01031 1676 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 CUL7Q14999 1698 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 SHPRHQ149N8 1683 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 SCN11AQ9UI33 1791 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 FRYQ5TBA9 3013 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 C5orf42Q9H799 3197 aa-0.63□□□□□ -2.51
RNU1-117P-201ENST00000517041 EPRSP07814 1512 aaKnown RBP-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 TMEM131LA2VDJ0 1609 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 TOGARAM1Q9Y4F4 1720 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 TRANK1O15050 2925 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 RIF1Q5UIP0 2472 aaKnown RBP-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 SMARCA2P51531 1590 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 DNMBPQ6XZF7 1577 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 THOC2Q8NI27 1593 aaKnown RBP-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 CORTO00230 105 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 DLEU1O43261 78 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 NDUFA2O43678 99 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 S100A8P05109 93 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 CRIP1P50238 77 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 NREPQ16612 68 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 UBL5Q9BZL1 73 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 NBEAQ8NFP9 2946 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 MYO9AB2RTY4 2548 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 PHLPP1O60346 1717 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 ITPR1Q14643 2758 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 ZFHX3Q15911 3703 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 URB2Q14146 1524 aaKnown RBP-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 HFM1A2PYH4 1435 aa-0.64□□□□□ -2.51
RNU1-117P-201ENST00000517041 ROBO1Q9Y6N7 1651 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 PDE4DIPQ5VU43 2346 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 CCDC88BA6NC98 1476 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 FANCAO15360 1455 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 CD163L1Q9NR16 1453 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 PVALEFA0A1B0GWK0 134 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 HMGA1P17096 107 aaKnown RBP-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 FAM107BQ9H098 131 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 KCNQ1DNQ9H478 68 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 ABRACLQ9P1F3 81 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 RABAC1Q9UI14 185 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 GNG8Q9UK08 70 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 SMG1Q96Q15 3661 aaKnown RBP-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 SRCAPQ6ZRS2 3230 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 FAM186AA6NE01 2351 aa-0.65□□□□□ -2.51
RNU1-117P-201ENST00000517041 ZZEF1O43149 2961 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 NRKQ7Z2Y5 1582 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 DIP2BQ9P265 1576 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 MED14O60244 1454 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 ARHGAP35Q9NRY4 1499 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 CEP152O94986 1710 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 NESP48681 1621 aa-0.66□□□□□ -2.51
RNU1-117P-201ENST00000517041 A0A1B0GV90 55 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 ETDCA0A1B0GVM5 59 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 RBP2P50120 134 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 S100A10P60903 97 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 ATP5EP2Q5VTU8 51 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 NEXMIFQ5QGS0 1516 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.66□□□□□ -2.527e-10■■■■■ 182.3
RNU1-117P-201ENST00000517041 CEP295Q9C0D2 2601 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 SPENQ96T58 3664 aaKnown RBP-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 SPEF2Q9C093 1822 aa-0.66□□□□□ -2.52
RNU1-117P-201ENST00000517041 CEP290O15078 2479 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms