RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 HMGN3Q15651 99 aa-3.32□□□□□ -2.94
RNU6-561P-201ENST00000516222 ATP7BP35670 1465 aa-3.33□□□□□ -2.94
RNU6-561P-201ENST00000516222 ANKRD36BQ8N2N9 1353 aa-3.33□□□□□ -2.94
RNU6-561P-201ENST00000516222 F8WEM9 126 aa-3.33□□□□□ -2.94
RNU6-561P-201ENST00000516222 LYNX1G3V0Z9 82 aa-3.33□□□□□ -2.94
RNU6-561P-201ENST00000516222 SVBPQ8N300 66 aa-3.33□□□□□ -2.94
RNU6-561P-201ENST00000516222 RAPGEF2Q9Y4G8 1499 aa-3.34□□□□□ -2.94
RNU6-561P-201ENST00000516222 MPC2O95563 127 aa-3.34□□□□□ -2.94
RNU6-561P-201ENST00000516222 GAFA1Q96PS6 74 aa-3.34□□□□□ -2.94
RNU6-561P-201ENST00000516222 LEPROTL1O95214 131 aa-3.35□□□□□ -2.95
RNU6-561P-201ENST00000516222 MLH3Q9UHC1 1453 aa-3.35□□□□□ -2.95
RNU6-561P-201ENST00000516222 ZNF831Q5JPB2 1677 aa-3.36□□□□□ -2.95
RNU6-561P-201ENST00000516222 TRGV9Q99603 122 aa-3.36□□□□□ -2.95
RNU6-561P-201ENST00000516222 NWD1Q149M9 1564 aa-3.38□□□□□ -2.95
RNU6-561P-201ENST00000516222 hADV29S1A0JD25 119 aa-3.38□□□□□ -2.95
RNU6-561P-201ENST00000516222 ETDBQ3ZM63 59 aa-3.38□□□□□ -2.95
RNU6-561P-201ENST00000516222 CSMD2Q7Z408 3487 aa-3.38□□□□□ -2.95
RNU6-561P-201ENST00000516222 BOD1L1Q8NFC6 3051 aa-3.39□□□□□ -2.95
RNU6-561P-201ENST00000516222 MYOM2P54296 1465 aa-3.39□□□□□ -2.95
RNU6-561P-201ENST00000516222 SNAPC5O75971 98 aa-3.39□□□□□ -2.95
RNU6-561P-201ENST00000516222 TOGARAM1Q9Y4F4 1720 aa-3.39□□□□□ -2.95
RNU6-561P-201ENST00000516222 CC2D2AQ9P2K1 1620 aa-3.4□□□□□ -2.95
RNU6-561P-201ENST00000516222 ZNF720Q7Z2F6 126 aa-3.4□□□□□ -2.95
RNU6-561P-201ENST00000516222 FYCO1Q9BQS8 1478 aa-3.41□□□□□ -2.95
RNU6-561P-201ENST00000516222 SUPT6HQ7KZ85 1726 aaKnown RBP-3.41□□□□□ -2.95
RNU6-561P-201ENST00000516222 NRKQ7Z2Y5 1582 aa-3.41□□□□□ -2.96
RNU6-561P-201ENST00000516222 IQCF6A8MYZ5 107 aa-3.41□□□□□ -2.96
RNU6-561P-201ENST00000516222 IGLV5-48A0A075B6I7 105 aa-3.42□□□□□ -2.96
RNU6-561P-201ENST00000516222 SPHKAPQ2M3C7 1700 aa-3.42□□□□□ -2.96
RNU6-561P-201ENST00000516222 A0A1B0GUT8 65 aa-3.43□□□□□ -2.96
RNU6-561P-201ENST00000516222 IER3IP1Q9Y5U9 82 aa-3.44□□□□□ -2.96
RNU6-561P-201ENST00000516222 PARP4Q9UKK3 1724 aaKnown RBP-3.44□□□□□ -2.96
RNU6-561P-201ENST00000516222 TEX14Q8IWB6 1497 aa-3.45□□□□□ -2.96
RNU6-561P-201ENST00000516222 WFDC9Q8NEX5 89 aa-3.45□□□□□ -2.96
RNU6-561P-201ENST00000516222 RGPD1P0DJD0 1748 aa-3.45□□□□□ -2.96
RNU6-561P-201ENST00000516222 NRXN1Q9ULB1 1477 aa-3.47□□□□□ -2.96
RNU6-561P-201ENST00000516222 POLR1AO95602 1720 aaPredicted RBP-3.47□□□□□ -2.96
RNU6-561P-201ENST00000516222 ABCA3Q99758 1704 aa-3.47□□□□□ -2.96
RNU6-561P-201ENST00000516222 LCE6AA0A183 80 aa-3.47□□□□□ -2.96
RNU6-561P-201ENST00000516222 MYH4Q9Y623 1939 aa-3.47□□□□□ -2.97
RNU6-561P-201ENST00000516222 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.47□□□□□ -2.97
RNU6-561P-201ENST00000516222 FREM2Q5SZK8 3169 aa-3.47□□□□□ -2.97
RNU6-561P-201ENST00000516222 LINC01546A6NGU7 62 aa-3.48□□□□□ -2.97
RNU6-561P-201ENST00000516222 CYB5AP00167 134 aa-3.48□□□□□ -2.97
RNU6-561P-201ENST00000516222 PLIN4Q96Q06 1357 aa-3.49□□□□□ -2.97
RNU6-561P-201ENST00000516222 PLGLAQ15195 96 aa-3.51□□□□□ -2.97
RNU6-561P-201ENST00000516222 LY75O60449 1722 aa-3.51□□□□□ -2.97
RNU6-561P-201ENST00000516222 LTN1O94822 1766 aa-3.51□□□□□ -2.97
RNU6-561P-201ENST00000516222 PRDM15P57071 1507 aaPredicted RBP-3.52□□□□□ -2.97
RNU6-561P-201ENST00000516222 GNGT2O14610 69 aa-3.52□□□□□ -2.97
RNU6-561P-201ENST00000516222 S100PP25815 95 aa-3.52□□□□□ -2.97
RNU6-561P-201ENST00000516222 GNG4P50150 75 aa-3.52□□□□□ -2.97
RNU6-561P-201ENST00000516222 PPP3R1P63098 170 aa-3.52□□□□□ -2.97
RNU6-561P-201ENST00000516222 DEFB4AO15263 64 aa-3.53□□□□□ -2.97
RNU6-561P-201ENST00000516222 WT1-ASQ06250 92 aa-3.53□□□□□ -2.97
RNU6-561P-201ENST00000516222 THOC2Q8NI27 1593 aaKnown RBP-3.54□□□□□ -2.98
RNU6-561P-201ENST00000516222 TRAV21A0A0B4J279 112 aa-3.54□□□□□ -2.98
RNU6-561P-201ENST00000516222 CCDC58Q4VC31 144 aa-3.54□□□□□ -2.98
RNU6-561P-201ENST00000516222 PRUNE2Q8WUY3 3088 aa-3.55□□□□□ -2.98
RNU6-561P-201ENST00000516222 UQCRHLA0A096LP55 91 aa-3.55□□□□□ -2.98
RNU6-561P-201ENST00000516222 ATOX1O00244 68 aa-3.55□□□□□ -2.98
RNU6-561P-201ENST00000516222 NOP10Q9NPE3 64 aaKnown RBP-3.55□□□□□ -2.98
RNU6-561P-201ENST00000516222 CLTCQ00610 1675 aaKnown RBP-3.55□□□□□ -2.98
RNU6-561P-201ENST00000516222 DDX60LQ5H9U9 1706 aaKnown RBP-3.56□□□□□ -2.98
RNU6-561P-201ENST00000516222 DOT1LQ8TEK3 1739 aa-3.56□□□□□ -2.98
RNU6-561P-201ENST00000516222 ACYP1P07311 99 aa-3.56□□□□□ -2.98
RNU6-561P-201ENST00000516222 PZPP20742 1482 aa-3.57□□□□□ -2.98
RNU6-561P-201ENST00000516222 NALCNQ8IZF0 1738 aa-3.57□□□□□ -2.98
RNU6-561P-201ENST00000516222 PMCHL2Q9BQD1 86 aa-3.57□□□□□ -2.98
RNU6-561P-201ENST00000516222 MAST1Q9Y2H9 1570 aa-3.58□□□□□ -2.98
RNU6-561P-201ENST00000516222 ITSN2Q9NZM3 1697 aa-3.59□□□□□ -2.98
RNU6-561P-201ENST00000516222 ROCK2O75116 1388 aaKnown RBP-3.59□□□□□ -2.98
RNU6-561P-201ENST00000516222 NDUFB1O75438 58 aa-3.59□□□□□ -2.98
RNU6-561P-201ENST00000516222 TSC22D3Q99576 134 aa-3.59□□□□□ -2.98
RNU6-561P-201ENST00000516222 EIF4G3O43432 1585 aaKnown RBP-3.59□□□□□ -2.98
RNU6-561P-201ENST00000516222 KIAA0586Q9BVV6 1533 aa-3.6□□□□□ -2.98
RNU6-561P-201ENST00000516222 CCNB3Q8WWL7 1395 aa-3.61□□□□□ -2.99
RNU6-561P-201ENST00000516222 SARNPP82979 210 aaKnown RBP-3.61□□□□□ -2.99
RNU6-561P-201ENST00000516222 BVES-AS1Q5T3Y7 98 aa-3.61□□□□□ -2.99
RNU6-561P-201ENST00000516222 EPRSP07814 1512 aaKnown RBP-3.61□□□□□ -2.99
RNU6-561P-201ENST00000516222 TMEM131LA2VDJ0 1609 aa-3.62□□□□□ -2.99
RNU6-561P-201ENST00000516222 NDUFA2O43678 99 aa-3.62□□□□□ -2.99
RNU6-561P-201ENST00000516222 RPL13AP3Q6NVV1 102 aa-3.62□□□□□ -2.99
RNU6-561P-201ENST00000516222 GTF2H5Q6ZYL4 71 aa-3.62□□□□□ -2.99
RNU6-561P-201ENST00000516222 ITSN1Q15811 1721 aa-3.62□□□□□ -2.99
RNU6-561P-201ENST00000516222 H3BUA1 57 aa-3.63□□□□□ -2.99
RNU6-561P-201ENST00000516222 COL5A1-AS1Q5SY13 56 aa-3.63□□□□□ -2.99
RNU6-561P-201ENST00000516222 KIF1AQ12756 1690 aa-3.63□□□□□ -2.99
RNU6-561P-201ENST00000516222 HMGN2P05204 90 aaKnown RBP-3.64□□□□□ -2.99
RNU6-561P-201ENST00000516222 DIP2BQ9P265 1576 aa-3.65□□□□□ -2.99
RNU6-561P-201ENST00000516222 FANCAO15360 1455 aa-3.66□□□□□ -2.99
RNU6-561P-201ENST00000516222 IFI27P40305 119 aaPredicted RBP-3.66□□□□□ -3
RNU6-561P-201ENST00000516222 CRYBG3Q68DQ2 2970 aa-3.66□□□□□ -3
RNU6-561P-201ENST00000516222 ACBD7Q8N6N7 88 aa-3.66□□□□□ -3
RNU6-561P-201ENST00000516222 ZFHX4Q86UP3 3567 aa-3.67□□□□□ -3
RNU6-561P-201ENST00000516222 CORTO00230 105 aa-3.67□□□□□ -3
RNU6-561P-201ENST00000516222 S100A1P23297 94 aa-3.67□□□□□ -3
RNU6-561P-201ENST00000516222 ZC3H13Q5T200 1668 aaKnown RBP-3.68□□□□□ -3
RNU6-561P-201ENST00000516222 SMIM11AP58511 58 aa-3.68□□□□□ -3
RNU6-561P-201ENST00000516222 SMARCA2P51531 1590 aa-3.68□□□□□ -3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms