RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CKS1BP61024 79 aa-4.55□□□□□ -3.14
SCARNA23-201ENST00000516060 C1orf54Q8WWF1 131 aa-4.55□□□□□ -3.14
SCARNA23-201ENST00000516060 CGREF1Q99674 301 aa-4.55□□□□□ -3.14
SCARNA23-201ENST00000516060 POLR1AO95602 1720 aaPredicted RBP-4.55□□□□□ -3.14
SCARNA23-201ENST00000516060 LRRC7Q96NW7 1537 aa-4.56□□□□□ -3.14
SCARNA23-201ENST00000516060 CRYM-AS1A6NIL9 109 aa-4.56□□□□□ -3.14
SCARNA23-201ENST00000516060 DR1Q01658 176 aa-4.56□□□□□ -3.14
SCARNA23-201ENST00000516060 DPH3P1Q9H4G8 78 aa-4.56□□□□□ -3.14
SCARNA23-201ENST00000516060 OOSP1A8MZH6 123 aa-4.57□□□□□ -3.14
SCARNA23-201ENST00000516060 ATP5EP56381 51 aaPredicted RBP-4.57□□□□□ -3.14
SCARNA23-201ENST00000516060 NWD1Q149M9 1564 aa-4.57□□□□□ -3.14
SCARNA23-201ENST00000516060 A0A1B0GUL6 1792 aa-4.58□□□□□ -3.14
SCARNA23-201ENST00000516060 RGPD1P0DJD0 1748 aa-4.58□□□□□ -3.14
SCARNA23-201ENST00000516060 MKI67P46013 3256 aaKnown RBP-4.59□□□□□ -3.14
SCARNA23-201ENST00000516060 MEIG1Q5JSS6 88 aa-4.59□□□□□ -3.14
SCARNA23-201ENST00000516060 ITSN2Q9NZM3 1697 aa-4.59□□□□□ -3.14
SCARNA23-201ENST00000516060 TRBV25-1A0A075B6N4 114 aa-4.6□□□□□ -3.15
SCARNA23-201ENST00000516060 SUPT6HQ7KZ85 1726 aaKnown RBP-4.6□□□□□ -3.15
SCARNA23-201ENST00000516060 PLCH1Q4KWH8 1693 aa-4.61□□□□□ -3.15
SCARNA23-201ENST00000516060 TMEM218A2RU14 115 aa-4.61□□□□□ -3.15
SCARNA23-201ENST00000516060 FABP1P07148 127 aa-4.61□□□□□ -3.15
SCARNA23-201ENST00000516060 PFDN5Q99471 154 aa-4.61□□□□□ -3.15
SCARNA23-201ENST00000516060 CHD1O14646 1710 aa-4.62□□□□□ -3.15
SCARNA23-201ENST00000516060 WT1-ASQ06250 92 aa-4.62□□□□□ -3.15
SCARNA23-201ENST00000516060 PMCHL1Q16048 86 aa-4.62□□□□□ -3.15
SCARNA23-201ENST00000516060 GAFA1Q96PS6 74 aa-4.62□□□□□ -3.15
SCARNA23-201ENST00000516060 MYH4Q9Y623 1939 aa-4.63□□□□□ -3.15
SCARNA23-201ENST00000516060 LCE6AA0A183 80 aa-4.63□□□□□ -3.15
SCARNA23-201ENST00000516060 CACFD1Q9UGQ2 172 aa-4.63□□□□□ -3.15
SCARNA23-201ENST00000516060 DEFB136Q30KP8 78 aa-4.64□□□□□ -3.15
SCARNA23-201ENST00000516060 SMIM15Q7Z3B0 74 aa-4.64□□□□□ -3.15
SCARNA23-201ENST00000516060 ABCC2Q92887 1545 aa-4.64□□□□□ -3.15
SCARNA23-201ENST00000516060 ANKRD36BQ8N2N9 1353 aa-4.65□□□□□ -3.15
SCARNA23-201ENST00000516060 ARPC4P59998 168 aa-4.65□□□□□ -3.15
SCARNA23-201ENST00000516060 LEPROTL1O95214 131 aa-4.66□□□□□ -3.16
SCARNA23-201ENST00000516060 MT-ATP8P03928 68 aa-4.66□□□□□ -3.16
SCARNA23-201ENST00000516060 DOT1LQ8TEK3 1739 aa-4.66□□□□□ -3.16
SCARNA23-201ENST00000516060 TMEM131LA2VDJ0 1609 aa-4.67□□□□□ -3.16
SCARNA23-201ENST00000516060 FOCADQ5VW36 1801 aa-4.67□□□□□ -3.16
SCARNA23-201ENST00000516060 CFAP47Q6ZTR5 3102 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 FAM24AA6NFZ4 105 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 D6R8Y8 96 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 SPART-AS1P0CW21 52 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 ALKAL2Q6UX46 152 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 MUSTN1Q8IVN3 82 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 KIF1AQ12756 1690 aa-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 KTN1Q86UP2 1357 aaKnown RBP-4.68□□□□□ -3.16
SCARNA23-201ENST00000516060 CC2D2AQ9P2K1 1620 aa-4.69□□□□□ -3.16
SCARNA23-201ENST00000516060 NOP10Q9NPE3 64 aaKnown RBP-4.7□□□□□ -3.16
SCARNA23-201ENST00000516060 CEP250Q9BV73 2442 aa-4.7□□□□□ -3.16
SCARNA23-201ENST00000516060 M0QZ58 72 aa-4.71□□□□□ -3.16
SCARNA23-201ENST00000516060 DNMBPQ6XZF7 1577 aa-4.71□□□□□ -3.16
SCARNA23-201ENST00000516060 IQCF6A8MYZ5 107 aa-4.72□□□□□ -3.17
SCARNA23-201ENST00000516060 KRTDAPP60985 99 aa-4.72□□□□□ -3.17
SCARNA23-201ENST00000516060 HMGN3Q15651 99 aa-4.72□□□□□ -3.17
SCARNA23-201ENST00000516060 ZNF436-AS1Q8NC38 126 aaPredicted RBP-4.72□□□□□ -3.17
SCARNA23-201ENST00000516060 ARHGAP5Q13017 1502 aa-4.72□□□□□ -3.17
SCARNA23-201ENST00000516060 RAPGEF2Q9Y4G8 1499 aa-4.73□□□□□ -3.17
SCARNA23-201ENST00000516060 GNG14A0A1W2PPG7 69 aa-4.73□□□□□ -3.17
SCARNA23-201ENST00000516060 UQCRHP07919 91 aa-4.73□□□□□ -3.17
SCARNA23-201ENST00000516060 MLH3Q9UHC1 1453 aa-4.74□□□□□ -3.17
SCARNA23-201ENST00000516060 NRXN1Q9ULB1 1477 aa-4.74□□□□□ -3.17
SCARNA23-201ENST00000516060 DDX60LQ5H9U9 1706 aaKnown RBP-4.75□□□□□ -3.17
SCARNA23-201ENST00000516060 ERVK-7P63135 1459 aa-4.75□□□□□ -3.17
SCARNA23-201ENST00000516060 LTN1O94822 1766 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 hADV29S1A0JD25 119 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 FAM25AB3EWG3 89 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 FAM25CB3EWG5 89 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 FAM25GB3EWG6 89 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 LEAP2Q969E1 77 aa-4.76□□□□□ -3.17
SCARNA23-201ENST00000516060 MPC2O95563 127 aa-4.77□□□□□ -3.17
SCARNA23-201ENST00000516060 S100PP25815 95 aa-4.77□□□□□ -3.17
SCARNA23-201ENST00000516060 RPS27P42677 84 aaKnown RBP-4.77□□□□□ -3.17
SCARNA23-201ENST00000516060 RPS27LQ71UM5 84 aaKnown RBP-4.77□□□□□ -3.17
SCARNA23-201ENST00000516060 USP34Q70CQ2 3546 aa-4.77□□□□□ -3.17
SCARNA23-201ENST00000516060 NAIPQ13075 1403 aa-4.78□□□□□ -3.17
SCARNA23-201ENST00000516060 A0A1B0GUT8 65 aa-4.78□□□□□ -3.17
SCARNA23-201ENST00000516060 ETDBQ3ZM63 59 aa-4.78□□□□□ -3.17
SCARNA23-201ENST00000516060 LRRIQ1Q96JM4 1722 aa-4.78□□□□□ -3.17
SCARNA23-201ENST00000516060 ACYP1P07311 99 aa-4.79□□□□□ -3.18
SCARNA23-201ENST00000516060 PAIP2BQ9ULR5 123 aaKnown RBP-4.79□□□□□ -3.18
SCARNA23-201ENST00000516060 KIAA0586Q9BVV6 1533 aa-4.79□□□□□ -3.18
SCARNA23-201ENST00000516060 ITSN1Q15811 1721 aa-4.8□□□□□ -3.18
SCARNA23-201ENST00000516060 H3BQ15 152 aa-4.8□□□□□ -3.18
SCARNA23-201ENST00000516060 NDUFC1O43677 76 aa-4.8□□□□□ -3.18
SCARNA23-201ENST00000516060 LZICQ8WZA0 190 aa-4.8□□□□□ -3.18
SCARNA23-201ENST00000516060 PLIN4Q96Q06 1357 aa-4.8□□□□□ -3.18
SCARNA23-201ENST00000516060 TRAV21A0A0B4J279 112 aa-4.81□□□□□ -3.18
SCARNA23-201ENST00000516060 KIF21BO75037 1637 aa-4.82□□□□□ -3.18
SCARNA23-201ENST00000516060 ZC3H13Q5T200 1668 aaKnown RBP-4.82□□□□□ -3.18
SCARNA23-201ENST00000516060 M0QY20 66 aa-4.82□□□□□ -3.18
SCARNA23-201ENST00000516060 LINC00470Q9BZP3 86 aa-4.82□□□□□ -3.18
SCARNA23-201ENST00000516060 BVES-AS1Q5T3Y7 98 aa-4.83□□□□□ -3.18
SCARNA23-201ENST00000516060 SPHKAPQ2M3C7 1700 aa-4.83□□□□□ -3.18
SCARNA23-201ENST00000516060 H3BUA1 57 aa-4.84□□□□□ -3.18
SCARNA23-201ENST00000516060 GNG7O60262 68 aa-4.84□□□□□ -3.18
SCARNA23-201ENST00000516060 SELENOWP63302 87 aa-4.84□□□□□ -3.18
SCARNA23-201ENST00000516060 CCDC58Q4VC31 144 aa-4.84□□□□□ -3.18
SCARNA23-201ENST00000516060 PIK3C2BO00750 1634 aa-4.84□□□□□ -3.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms