RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
NEDD9-215ENST00000514660 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
NEDD9-215ENST00000514660 H7C2G1 150 aa5.74□□□□□ -1.49
NEDD9-215ENST00000514660 PRYO14603 147 aa5.74□□□□□ -1.49
NEDD9-215ENST00000514660 SPRR1AP35321 89 aa5.74□□□□□ -1.49
NEDD9-215ENST00000514660 IGLV8-61A0A075B6I0 122 aa5.73□□□□□ -1.49
NEDD9-215ENST00000514660 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
NEDD9-215ENST00000514660 UBE2AP49459 152 aa5.73□□□□□ -1.49
NEDD9-215ENST00000514660 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
NEDD9-215ENST00000514660 ZNF73O43830 326 aaPredicted RBP5.72□□□□□ -1.49
NEDD9-215ENST00000514660 TAX1BP3O14907 124 aa5.71□□□□□ -1.5
NEDD9-215ENST00000514660 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
NEDD9-215ENST00000514660 B5MCH6 92 aa5.7□□□□□ -1.5
NEDD9-215ENST00000514660 Q8NBF4 154 aa5.7□□□□□ -1.5
NEDD9-215ENST00000514660 CBY1Q9Y3M2 126 aa5.7□□□□□ -1.5
NEDD9-215ENST00000514660 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
NEDD9-215ENST00000514660 Q1RN00 199 aa5.69□□□□□ -1.5
NEDD9-215ENST00000514660 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
NEDD9-215ENST00000514660 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
NEDD9-215ENST00000514660 NAA38Q9BRA0 125 aaKnown RBP5.69□□□□□ -1.5
NEDD9-215ENST00000514660 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
NEDD9-215ENST00000514660 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
NEDD9-215ENST00000514660 TRIAP1O43715 76 aa5.68□□□□□ -1.5
NEDD9-215ENST00000514660 COX7BP24311 80 aa5.68□□□□□ -1.5
NEDD9-215ENST00000514660 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
NEDD9-215ENST00000514660 Q8N377 158 aa5.68□□□□□ -1.5
NEDD9-215ENST00000514660 ELOF1P60002 83 aaKnown RBP5.67□□□□□ -1.5
NEDD9-215ENST00000514660 Q6ZRX8 168 aa5.67□□□□□ -1.5
NEDD9-215ENST00000514660 Q9BRP9 147 aa5.67□□□□□ -1.5
NEDD9-215ENST00000514660 H3BUT2 72 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 PSMB2P49721 201 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 VAMP3Q15836 100 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 LINC00575Q6W349 94 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 SPRR4Q96PI1 79 aa5.66□□□□□ -1.5
NEDD9-215ENST00000514660 H0YGX0 51 aa5.65□□□□□ -1.5
NEDD9-215ENST00000514660 FAM218AQ96MZ4 157 aa5.65□□□□□ -1.5
NEDD9-215ENST00000514660 SPINK1P00995 79 aa5.64□□□□□ -1.51
NEDD9-215ENST00000514660 SCGB1C2P0DMR2 95 aa5.64□□□□□ -1.51
NEDD9-215ENST00000514660 CLEC2BQ92478 149 aa5.64□□□□□ -1.51
NEDD9-215ENST00000514660 COX6CP09669 75 aa5.63□□□□□ -1.51
NEDD9-215ENST00000514660 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
NEDD9-215ENST00000514660 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
NEDD9-215ENST00000514660 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
NEDD9-215ENST00000514660 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
NEDD9-215ENST00000514660 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
NEDD9-215ENST00000514660 hADV29S1A0JD25 119 aa5.61□□□□□ -1.51
NEDD9-215ENST00000514660 TCL1BO95988 128 aa5.61□□□□□ -1.51
NEDD9-215ENST00000514660 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
NEDD9-215ENST00000514660 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
NEDD9-215ENST00000514660 A0A1B0GX51 115 aa5.59□□□□□ -1.51
NEDD9-215ENST00000514660 LST1O00453 97 aa5.59□□□□□ -1.51
NEDD9-215ENST00000514660 SLC25A20O43772 301 aa5.59□□□□□ -1.51
NEDD9-215ENST00000514660 TRACP01848 142 aa5.58□□□□□ -1.52
NEDD9-215ENST00000514660 FABP2P12104 132 aa5.58□□□□□ -1.52
NEDD9-215ENST00000514660 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
NEDD9-215ENST00000514660 C9orf92A6NGG3 77 aa5.57□□□□□ -1.52
NEDD9-215ENST00000514660 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
NEDD9-215ENST00000514660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-215ENST00000514660 Q6ZQY7 126 aa5.57□□□□□ -1.52
NEDD9-215ENST00000514660 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 SNCGO76070 127 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 SPRR1BP22528 89 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
NEDD9-215ENST00000514660 ATXN8Q156A1 80 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 DEFB105AQ8NG35 78 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 SPCS1Q9Y6A9 102 aa5.56□□□□□ -1.52
NEDD9-215ENST00000514660 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
NEDD9-215ENST00000514660 SMIM29Q86T20 159 aa5.55□□□□□ -1.52
NEDD9-215ENST00000514660 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
NEDD9-215ENST00000514660 H3BMG7 143 aa5.54□□□□□ -1.52
NEDD9-215ENST00000514660 K7EP34 96 aa5.54□□□□□ -1.52
NEDD9-215ENST00000514660 MOBPQ13875 183 aa5.54□□□□□ -1.52
NEDD9-215ENST00000514660 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
NEDD9-215ENST00000514660 A0A1B0GV90 55 aa5.53□□□□□ -1.52
NEDD9-215ENST00000514660 MT2AP02795 61 aa5.53□□□□□ -1.52
NEDD9-215ENST00000514660 BAALC-AS2P0C853 105 aa5.53□□□□□ -1.52
NEDD9-215ENST00000514660 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
NEDD9-215ENST00000514660 OCIAD2Q56VL3 154 aa5.53□□□□□ -1.52
NEDD9-215ENST00000514660 DNAL4O96015 105 aa5.52□□□□□ -1.53
NEDD9-215ENST00000514660 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
NEDD9-215ENST00000514660 ORMDL1Q9P0S3 153 aa5.52□□□□□ -1.53
NEDD9-215ENST00000514660 NEBP20929 6669 aa5.51□□□□□ -1.53
NEDD9-215ENST00000514660 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
NEDD9-215ENST00000514660 C9JAW5 83 aa5.51□□□□□ -1.53
NEDD9-215ENST00000514660 MT1FP04733 61 aa5.5□□□□□ -1.53
NEDD9-215ENST00000514660 GTF2H5Q6ZYL4 71 aa5.5□□□□□ -1.53
NEDD9-215ENST00000514660 MTURNQ8N3F0 131 aa5.5□□□□□ -1.53
NEDD9-215ENST00000514660 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
NEDD9-215ENST00000514660 PRO0461Q9UI25 63 aa5.5□□□□□ -1.53
NEDD9-215ENST00000514660 H3BQ85 93 aa5.49□□□□□ -1.53
NEDD9-215ENST00000514660 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
NEDD9-215ENST00000514660 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
NEDD9-215ENST00000514660 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
NEDD9-215ENST00000514660 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
NEDD9-215ENST00000514660 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
NEDD9-215ENST00000514660 SSBP3-AS1Q7Z2R9 100 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms