RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 LINC00483Q53H64 154 aa7.06□□□□□ -1.28
SMAD1-212ENST00000514168 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
SMAD1-212ENST00000514168 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
SMAD1-212ENST00000514168 DNAL4O96015 105 aa7.05□□□□□ -1.28
SMAD1-212ENST00000514168 CRYGAP11844 174 aa7.05□□□□□ -1.28
SMAD1-212ENST00000514168 OCIAD2Q56VL3 154 aa7.05□□□□□ -1.28
SMAD1-212ENST00000514168 LST1O00453 97 aa7.04□□□□□ -1.28
SMAD1-212ENST00000514168 GHRHP01286 108 aa7.04□□□□□ -1.28
SMAD1-212ENST00000514168 TRACP01848 142 aa7.04□□□□□ -1.28
SMAD1-212ENST00000514168 LINC01547P58512 204 aaPredicted RBP7.04□□□□□ -1.28
SMAD1-212ENST00000514168 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 A0A087X002 238 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 TCL1BO95988 128 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 Q8N377 158 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 PPDPFLQ8WWR9 84 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
SMAD1-212ENST00000514168 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
SMAD1-212ENST00000514168 LAMTOR3Q9UHA4 124 aa7.02□□□□□ -1.29
SMAD1-212ENST00000514168 H3BQ85 93 aa7□□□□□ -1.29
SMAD1-212ENST00000514168 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
SMAD1-212ENST00000514168 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
SMAD1-212ENST00000514168 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
SMAD1-212ENST00000514168 IGLV9-49A0A0B4J1Y8 123 aa6.99□□□□□ -1.29
SMAD1-212ENST00000514168 SMIM29Q86T20 159 aa6.99□□□□□ -1.29
SMAD1-212ENST00000514168 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
SMAD1-212ENST00000514168 LPAP08519 4548 aa6.99□□□□□ -1.29
SMAD1-212ENST00000514168 F8W1H4 67 aa6.98□□□□□ -1.29
SMAD1-212ENST00000514168 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
SMAD1-212ENST00000514168 K7ERU9 68 aa6.97□□□□□ -1.29
SMAD1-212ENST00000514168 MOBPQ13875 183 aa6.97□□□□□ -1.29
SMAD1-212ENST00000514168 C9orf153Q5TBE3 101 aa6.97□□□□□ -1.29
SMAD1-212ENST00000514168 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
SMAD1-212ENST00000514168 F8WEM9 126 aa6.96□□□□□ -1.3
SMAD1-212ENST00000514168 Q8NBF4 154 aa6.96□□□□□ -1.3
SMAD1-212ENST00000514168 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
SMAD1-212ENST00000514168 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
SMAD1-212ENST00000514168 C9JAW5 83 aa6.94□□□□□ -1.3
SMAD1-212ENST00000514168 H3BMG7 143 aa6.94□□□□□ -1.3
SMAD1-212ENST00000514168 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
SMAD1-212ENST00000514168 J3QR89 54 aa6.91□□□□□ -1.3
SMAD1-212ENST00000514168 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
SMAD1-212ENST00000514168 H3BT86 120 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 Q6JHZ5 121 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 PRO0461Q9UI25 63 aa6.9□□□□□ -1.3
SMAD1-212ENST00000514168 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
SMAD1-212ENST00000514168 IGFL1Q6UW32 110 aa6.87□□□□□ -1.31
SMAD1-212ENST00000514168 A0A0G2JQZ4 141 aa6.86□□□□□ -1.31
SMAD1-212ENST00000514168 A0A1B0GV72 72 aa6.86□□□□□ -1.31
SMAD1-212ENST00000514168 JMJD7-PLA2G4BH0Y9G9 81 aa6.86□□□□□ -1.31
SMAD1-212ENST00000514168 SPINK1P00995 79 aa6.86□□□□□ -1.31
SMAD1-212ENST00000514168 RBM3P98179 157 aaKnown RBP6.86□□□□□ -1.31
SMAD1-212ENST00000514168 CD164Q04900 197 aa6.85□□□□□ -1.31
SMAD1-212ENST00000514168 HRCT1Q6UXD1 115 aa6.85□□□□□ -1.31
SMAD1-212ENST00000514168 MUC2Q02817 5179 aa6.83□□□□□ -1.32
SMAD1-212ENST00000514168 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
SMAD1-212ENST00000514168 DSCR8Q96T75 97 aa6.83□□□□□ -1.32
SMAD1-212ENST00000514168 TRBV7-4A0A0J9YYF1 115 aa6.82□□□□□ -1.32
SMAD1-212ENST00000514168 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
SMAD1-212ENST00000514168 TEN1Q86WV5 123 aa6.82□□□□□ -1.32
SMAD1-212ENST00000514168 VPS25Q9BRG1 176 aa6.82□□□□□ -1.32
SMAD1-212ENST00000514168 ETDBQ3ZM63 59 aa6.81□□□□□ -1.32
SMAD1-212ENST00000514168 OBSCN-AS1Q96MR7 158 aa6.81□□□□□ -1.32
SMAD1-212ENST00000514168 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
SMAD1-212ENST00000514168 Q6Q795 121 aa6.8□□□□□ -1.32
SMAD1-212ENST00000514168 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
SMAD1-212ENST00000514168 TRBV7-7A0A0K0K1E9 115 aa6.79□□□□□ -1.32
SMAD1-212ENST00000514168 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
SMAD1-212ENST00000514168 PDE6GP18545 87 aa6.79□□□□□ -1.32
SMAD1-212ENST00000514168 LOC110117498A0A087WWA1 95 aa6.78□□□□□ -1.32
SMAD1-212ENST00000514168 CCKP06307 115 aa6.78□□□□□ -1.32
SMAD1-212ENST00000514168 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
SMAD1-212ENST00000514168 Q5XG85 94 aa6.77□□□□□ -1.33
SMAD1-212ENST00000514168 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
SMAD1-212ENST00000514168 Q6ZQT0 140 aa6.76□□□□□ -1.33
SMAD1-212ENST00000514168 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
SMAD1-212ENST00000514168 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
SMAD1-212ENST00000514168 A0A087WSZ3 146 aa6.74□□□□□ -1.33
SMAD1-212ENST00000514168 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
SMAD1-212ENST00000514168 SS18L2Q9UHA2 77 aa6.73□□□□□ -1.33
SMAD1-212ENST00000514168 A0A1B0GW54 56 aa6.72□□□□□ -1.33
SMAD1-212ENST00000514168 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
SMAD1-212ENST00000514168 RETNLBQ9BQ08 111 aa6.72□□□□□ -1.33
SMAD1-212ENST00000514168 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
SMAD1-212ENST00000514168 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
SMAD1-212ENST00000514168 PRR4Q16378 134 aa6.69□□□□□ -1.34
SMAD1-212ENST00000514168 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
SMAD1-212ENST00000514168 FP248Q71RG6 208 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-212ENST00000514168 PCP4P48539 62 aa6.68□□□□□ -1.34
SMAD1-212ENST00000514168 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
SMAD1-212ENST00000514168 ACYP1P07311 99 aa6.66□□□□□ -1.34
SMAD1-212ENST00000514168 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
SMAD1-212ENST00000514168 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.34
SMAD1-212ENST00000514168 Q96NJ1 140 aa6.63□□□□□ -1.35
SMAD1-212ENST00000514168 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
SMAD1-212ENST00000514168 NREPQ16612 68 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms