RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 SPG11Q96JI7 2443 aa-0.69□□□□□ -2.52
SMN1-208ENST00000513228 ZFHX4Q86UP3 3567 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 AKAP12Q02952 1782 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 DNAH5Q8TE73 4624 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 ZZEF1O43149 2961 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 DMXL1Q9Y485 3027 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 HMGN2P05204 90 aaKnown RBP-0.7□□□□□ -2.52
SMN1-208ENST00000513228 NEXMIFQ5QGS0 1516 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 RGPD8O14715 1765 aaPredicted RBP-0.7□□□□□ -2.52
SMN1-208ENST00000513228 RGPD5Q99666 1765 aa-0.7□□□□□ -2.52
SMN1-208ENST00000513228 CEP162Q5TB80 1403 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 TRRAPQ9Y4A5 3859 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.71□□□□□ -2.52
SMN1-208ENST00000513228 FRYQ5TBA9 3013 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 SUPT6HQ7KZ85 1726 aaKnown RBP-0.71□□□□□ -2.52
SMN1-208ENST00000513228 A0A1B0GUT8 65 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 MT1AP04731 61 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 COX6B2Q6YFQ2 88 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 PKD1L2Q7Z442 2459 aa-0.71□□□□□ -2.52
SMN1-208ENST00000513228 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.71□□□□□ -2.52
SMN1-208ENST00000513228 IQCF6A8MYZ5 107 aa-0.72□□□□□ -2.52
SMN1-208ENST00000513228 PLGLAQ15195 96 aa-0.72□□□□□ -2.52
SMN1-208ENST00000513228 GAFA1Q96PS6 74 aa-0.72□□□□□ -2.52
SMN1-208ENST00000513228 DNAH17Q9UFH2 4485 aa-0.72□□□□□ -2.52
SMN1-208ENST00000513228 SPTBN5Q9NRC6 3674 aaKnown RBP-0.72□□□□□ -2.52
SMN1-208ENST00000513228 ACACAQ13085 2346 aa-0.72□□□□□ -2.53
SMN1-208ENST00000513228 POLR1AO95602 1720 aaPredicted RBP-0.72□□□□□ -2.53
SMN1-208ENST00000513228 TMEM131LA2VDJ0 1609 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 USP32Q8NFA0 1604 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 GYPAP02724 150 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 PEA15Q15121 130 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 C5orf42Q9H799 3197 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 TIAM2Q8IVF5 1701 aa-0.73□□□□□ -2.53
SMN1-208ENST00000513228 DMXL2Q8TDJ6 3036 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 MYO15AQ9UKN7 3530 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 ADGRG4Q8IZF6 3080 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 SMIM11AP58511 58 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 PKIAP61925 76 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 RPL38P63173 70 aaKnown RBP-0.74□□□□□ -2.53
SMN1-208ENST00000513228 MT1HP80294 61 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 DNAH10Q8IVF4 4471 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 BOD1L1Q8NFC6 3051 aa-0.74□□□□□ -2.53
SMN1-208ENST00000513228 TRANK1O15050 2925 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 ZNF831Q5JPB2 1677 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 ACACBO00763 2458 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 RGPD4Q7Z3J3 1758 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 SCN11AQ9UI33 1791 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 DNAH8Q96JB1 4490 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 TRAV21A0A0B4J279 112 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 H3BNG1 76 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 S100A8P05109 93 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 MT1HL1P0DM35 61 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 ATMQ13315 3056 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 PDE4DIPQ5VU43 2346 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.75□□□□□ -2.53
SMN1-208ENST00000513228 DOT1LQ8TEK3 1739 aa-0.75□□□□□ -2.53
SMN1-208ENST00000513228 RGPD3A6NKT7 1758 aaPredicted RBP-0.75□□□□□ -2.53
SMN1-208ENST00000513228 MYO9AB2RTY4 2548 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 DEFA5Q01523 94 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 KRTAP19-6Q3LI70 58 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 NWD1Q149M9 1564 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 NESP48681 1621 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 LTN1O94822 1766 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 TRIOO75962 3097 aa-0.76□□□□□ -2.53
SMN1-208ENST00000513228 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.76□□□□□ -2.53
SMN1-208ENST00000513228 BPTFQ12830 3046 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 LRBAP50851 2863 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 PLXNC1O60486 1568 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 MYMXA0A1B0GTQ4 84 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 CYB5AP00167 134 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 MT1XP80297 61 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 WFDC9Q8NEX5 89 aa-0.77□□□□□ -2.53
SMN1-208ENST00000513228 TLN1Q9Y490 2541 aaKnown RBP-0.77□□□□□ -2.53
SMN1-208ENST00000513228 PRUNE2Q8WUY3 3088 aa-0.78□□□□□ -2.53
SMN1-208ENST00000513228 MT1BP07438 61 aa-0.78□□□□□ -2.53
SMN1-208ENST00000513228 WIZO95785 1651 aa-0.78□□□□□ -2.53
SMN1-208ENST00000513228 PRO3102Q9H379 93 aa-0.79□□□□□ -2.54
SMN1-208ENST00000513228 DMDP11532 3685 aa-0.79□□□□□ -2.54
SMN1-208ENST00000513228 NCOA2Q15596 1464 aa-0.8□□□□□ -2.54
SMN1-208ENST00000513228 C9orf92A6NGG3 77 aa-0.8□□□□□ -2.54
SMN1-208ENST00000513228 K7EP34 96 aa-0.8□□□□□ -2.54
SMN1-208ENST00000513228 LINC00158P58513 81 aa-0.8□□□□□ -2.54
SMN1-208ENST00000513228 FAM186AA6NE01 2351 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 FREM2Q5SZK8 3169 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 C3orf79P0CE67 100 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 SNRPFP62306 86 aaKnown RBP-0.81□□□□□ -2.54
SMN1-208ENST00000513228 PYY3Q5JQD4 70 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 CSMD2Q7Z408 3487 aa-0.81□□□□□ -2.54
SMN1-208ENST00000513228 CCNB3Q8WWL7 1395 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 PLIN4Q96Q06 1357 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 ABCC3O15438 1527 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 MAP3K1Q13233 1512 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 LCE6AA0A183 80 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 CEBPZOSA8MTT3 80 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 H0YAA0 97 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 LINC00643Q86TS7 51 aa-0.82□□□□□ -2.54
SMN1-208ENST00000513228 S100A16Q96FQ6 103 aaKnown RBP-0.82□□□□□ -2.54
SMN1-208ENST00000513228 RANBP2P49792 3224 aaKnown RBP-0.82□□□□□ -2.54
SMN1-208ENST00000513228 TLN2Q9Y4G6 2542 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms