RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 UTRNP46939 3433 aa10.26□□□□□ -0.77
ARHGEF28-212ENST00000513042 ADM2Q7Z4H4 148 aa10.25□□□□□ -0.77
ARHGEF28-212ENST00000513042 BPTFQ12830 3046 aa10.25□□□□□ -0.77
ARHGEF28-212ENST00000513042 PANO1I0J062 215 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 C5orf42Q9H799 3197 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 Q6ZR54 194 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 LCE6AA0A183 80 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 PLAC4Q8WY50 150 aa10.12□□□□□ -0.79
ARHGEF28-212ENST00000513042 A0A087X002 238 aa10.12□□□□□ -0.79
ARHGEF28-212ENST00000513042 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
ARHGEF28-212ENST00000513042 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
ARHGEF28-212ENST00000513042 KRTAP4-16G5E9R7 235 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF28-212ENST00000513042 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
ARHGEF28-212ENST00000513042 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF28-212ENST00000513042 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
ARHGEF28-212ENST00000513042 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
ARHGEF28-212ENST00000513042 A8MU10 97 aa9.98□□□□□ -0.81
ARHGEF28-212ENST00000513042 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
ARHGEF28-212ENST00000513042 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
ARHGEF28-212ENST00000513042 ITPR3Q14573 2671 aa9.96□□□□□ -0.81
ARHGEF28-212ENST00000513042 CHD7Q9P2D1 2997 aa9.86□□□□□ -0.83
ARHGEF28-212ENST00000513042 A8MUU9 505 aa9.84□□□□□ -0.83
ARHGEF28-212ENST00000513042 ATRQ13535 2644 aa9.84□□□□□ -0.83
ARHGEF28-212ENST00000513042 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 ASB16-AS1Q495Z4 193 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 PCNTO95613 3336 aa9.82□□□□□ -0.84
ARHGEF28-212ENST00000513042 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
ARHGEF28-212ENST00000513042 FLNBO75369 2602 aaKnown RBP9.79□□□□□ -0.84
ARHGEF28-212ENST00000513042 A6NN06 94 aa9.79□□□□□ -0.84
ARHGEF28-212ENST00000513042 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
ARHGEF28-212ENST00000513042 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
ARHGEF28-212ENST00000513042 CFAP54Q96N23 3096 aa9.74□□□□□ -0.85
ARHGEF28-212ENST00000513042 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
ARHGEF28-212ENST00000513042 MAST4O15021 2626 aa9.71□□□□□ -0.86
ARHGEF28-212ENST00000513042 MKI67P46013 3256 aaKnown RBP9.69□□□□□ -0.86
ARHGEF28-212ENST00000513042 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
ARHGEF28-212ENST00000513042 HELZ2Q9BYK8 2649 aaKnown RBP9.67□□□□□ -0.86
ARHGEF28-212ENST00000513042 CFAP46Q8IYW2 2715 aa9.63□□□□□ -0.87
ARHGEF28-212ENST00000513042 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
ARHGEF28-212ENST00000513042 KRTAP13-1Q8IUC0 172 aa9.61□□□□□ -0.87
ARHGEF28-212ENST00000513042 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
ARHGEF28-212ENST00000513042 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
ARHGEF28-212ENST00000513042 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
ARHGEF28-212ENST00000513042 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
ARHGEF28-212ENST00000513042 MGAQ8IWI9 3026 aa9.55□□□□□ -0.88
ARHGEF28-212ENST00000513042 HTTP42858 3142 aa9.51□□□□□ -0.89
ARHGEF28-212ENST00000513042 NBEAL1Q6ZS30 2694 aa9.51□□□□□ -0.89
ARHGEF28-212ENST00000513042 TNP1P09430 55 aa9.49□□□□□ -0.89
ARHGEF28-212ENST00000513042 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF28-212ENST00000513042 AKAP13Q12802 2813 aa9.48□□□□□ -0.89
ARHGEF28-212ENST00000513042 TRIOO75962 3097 aa9.47□□□□□ -0.89
ARHGEF28-212ENST00000513042 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
ARHGEF28-212ENST00000513042 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF28-212ENST00000513042 GCN1Q92616 2671 aaKnown RBP9.44□□□□□ -0.9
ARHGEF28-212ENST00000513042 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
ARHGEF28-212ENST00000513042 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
ARHGEF28-212ENST00000513042 BRCA2P51587 3418 aa9.38□□□□□ -0.91
ARHGEF28-212ENST00000513042 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
ARHGEF28-212ENST00000513042 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
ARHGEF28-212ENST00000513042 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
ARHGEF28-212ENST00000513042 RANBP2P49792 3224 aaKnown RBP9.35□□□□□ -0.91
ARHGEF28-212ENST00000513042 CENPEQ02224 2701 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 UNC79Q9P2D8 2635 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 NBEAL2Q6ZNJ1 2754 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 CELSR3Q9NYQ7 3312 aa9.31□□□□□ -0.92
ARHGEF28-212ENST00000513042 WDFY4Q6ZS81 3184 aa9.31□□□□□ -0.92
ARHGEF28-212ENST00000513042 UNC80Q8N2C7 3258 aa9.3□□□□□ -0.92
ARHGEF28-212ENST00000513042 KRTAP10-8P60410 259 aa9.3□□□□□ -0.92
ARHGEF28-212ENST00000513042 TRANK1O15050 2925 aa9.26□□□□□ -0.93
ARHGEF28-212ENST00000513042 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
ARHGEF28-212ENST00000513042 XP32Q5T750 250 aa9.24□□□□□ -0.93
ARHGEF28-212ENST00000513042 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
ARHGEF28-212ENST00000513042 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
ARHGEF28-212ENST00000513042 PRUNE2Q8WUY3 3088 aa9.21□□□□□ -0.94
ARHGEF28-212ENST00000513042 FRYQ5TBA9 3013 aa9.21□□□□□ -0.94
ARHGEF28-212ENST00000513042 DNAH14Q0VDD8 3507 aa9.19□□□□□ -0.94
ARHGEF28-212ENST00000513042 H0YAA0 97 aa9.17□□□□□ -0.94
ARHGEF28-212ENST00000513042 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
ARHGEF28-212ENST00000513042 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.94
ARHGEF28-212ENST00000513042 COL6A5A8TX70 2615 aa9.14□□□□□ -0.95
ARHGEF28-212ENST00000513042 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
ARHGEF28-212ENST00000513042 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
ARHGEF28-212ENST00000513042 ZNF292O60281 2723 aa9.07□□□□□ -0.96
ARHGEF28-212ENST00000513042 KALRNO60229 2985 aa9.07□□□□□ -0.96
ARHGEF28-212ENST00000513042 VPS13AQ96RL7 3174 aa9.06□□□□□ -0.96
ARHGEF28-212ENST00000513042 COL6A3P12111 3177 aa9.06□□□□□ -0.96
ARHGEF28-212ENST00000513042 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
ARHGEF28-212ENST00000513042 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
ARHGEF28-212ENST00000513042 ITPR2Q14571 2701 aa9.02□□□□□ -0.96
ARHGEF28-212ENST00000513042 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
ARHGEF28-212ENST00000513042 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
ARHGEF28-212ENST00000513042 P0C880 135 aa9□□□□□ -0.97
ARHGEF28-212ENST00000513042 SZT2Q5T011 3432 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms