RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
SNF8-206ENST00000509989 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
SNF8-206ENST00000509989 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
SNF8-206ENST00000509989 SMIM6P0DI80 62 aa7.52□□□□□ -1.21
SNF8-206ENST00000509989 BVES-AS1Q5T3Y7 98 aa7.51□□□□□ -1.21
SNF8-206ENST00000509989 PRO1854Q9UHT4 67 aa7.51□□□□□ -1.21
SNF8-206ENST00000509989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
SNF8-206ENST00000509989 TRIAP1O43715 76 aa7.49□□□□□ -1.21
SNF8-206ENST00000509989 CD164Q04900 197 aa7.49□□□□□ -1.21
SNF8-206ENST00000509989 HSD52Q0P140 79 aa7.49□□□□□ -1.21
SNF8-206ENST00000509989 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
SNF8-206ENST00000509989 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
SNF8-206ENST00000509989 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
SNF8-206ENST00000509989 H3BUT2 72 aa7.47□□□□□ -1.21
SNF8-206ENST00000509989 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
SNF8-206ENST00000509989 IGLV8-61A0A075B6I0 122 aa7.46□□□□□ -1.22
SNF8-206ENST00000509989 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
SNF8-206ENST00000509989 C1orf195Q5TG92 126 aa7.46□□□□□ -1.22
SNF8-206ENST00000509989 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
SNF8-206ENST00000509989 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
SNF8-206ENST00000509989 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
SNF8-206ENST00000509989 C9orf92A6NGG3 77 aa7.45□□□□□ -1.22
SNF8-206ENST00000509989 A6NJY4 79 aa7.45□□□□□ -1.22
SNF8-206ENST00000509989 XP32Q5T750 250 aa7.45□□□□□ -1.22
SNF8-206ENST00000509989 F8WEM9 126 aa7.44□□□□□ -1.22
SNF8-206ENST00000509989 H0YGX0 51 aa7.44□□□□□ -1.22
SNF8-206ENST00000509989 Q5XG85 94 aa7.43□□□□□ -1.22
SNF8-206ENST00000509989 SNHG12Q9BXW3 62 aa7.42□□□□□ -1.22
SNF8-206ENST00000509989 TSTD3H0UI37 97 aa7.41□□□□□ -1.22
SNF8-206ENST00000509989 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
SNF8-206ENST00000509989 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
SNF8-206ENST00000509989 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
SNF8-206ENST00000509989 Q6JHZ5 121 aa7.39□□□□□ -1.23
SNF8-206ENST00000509989 PPDPFLQ8WWR9 84 aa7.39□□□□□ -1.23
SNF8-206ENST00000509989 PSMB2P49721 201 aa7.38□□□□□ -1.23
SNF8-206ENST00000509989 A0A1B0GV72 72 aa7.37□□□□□ -1.23
SNF8-206ENST00000509989 FABP2P12104 132 aa7.36□□□□□ -1.23
SNF8-206ENST00000509989 NAA38Q9BRA0 125 aaKnown RBP7.36□□□□□ -1.23
SNF8-206ENST00000509989 A0A1B0GX51 115 aa7.35□□□□□ -1.23
SNF8-206ENST00000509989 H3BMG7 143 aa7.34□□□□□ -1.23
SNF8-206ENST00000509989 A0A1W2PNM2 257 aa7.33□□□□□ -1.24
SNF8-206ENST00000509989 TCL1BO95988 128 aa7.33□□□□□ -1.24
SNF8-206ENST00000509989 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
SNF8-206ENST00000509989 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
SNF8-206ENST00000509989 SNCGO76070 127 aa7.31□□□□□ -1.24
SNF8-206ENST00000509989 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
SNF8-206ENST00000509989 ORMDL1Q9P0S3 153 aa7.3□□□□□ -1.24
SNF8-206ENST00000509989 LST1O00453 97 aa7.29□□□□□ -1.24
SNF8-206ENST00000509989 Q6Q795 121 aa7.29□□□□□ -1.24
SNF8-206ENST00000509989 Q96NJ1 140 aa7.29□□□□□ -1.24
SNF8-206ENST00000509989 A0A087WSZ3 146 aa7.28□□□□□ -1.24
SNF8-206ENST00000509989 DNAL4O96015 105 aa7.28□□□□□ -1.24
SNF8-206ENST00000509989 COX6CP09669 75 aa7.28□□□□□ -1.24
SNF8-206ENST00000509989 SCGB1C2P0DMR2 95 aa7.28□□□□□ -1.24
SNF8-206ENST00000509989 TEN1Q86WV5 123 aa7.28□□□□□ -1.24
SNF8-206ENST00000509989 M0R143 59 aa7.27□□□□□ -1.25
SNF8-206ENST00000509989 TRACP01848 142 aa7.26□□□□□ -1.25
SNF8-206ENST00000509989 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
SNF8-206ENST00000509989 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
SNF8-206ENST00000509989 TMEM256-PLSCR3K7ERE1 68 aa7.23□□□□□ -1.25
SNF8-206ENST00000509989 BATFQ16520 125 aa7.23□□□□□ -1.25
SNF8-206ENST00000509989 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
SNF8-206ENST00000509989 ANKRD29Q8N6D5 301 aa7.23□□□□□ -1.25
SNF8-206ENST00000509989 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
SNF8-206ENST00000509989 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
SNF8-206ENST00000509989 BAALC-AS2P0C853 105 aa7.21□□□□□ -1.26
SNF8-206ENST00000509989 UBE2V1Q13404 147 aa7.21□□□□□ -1.26
SNF8-206ENST00000509989 PCP4L1A6NKN8 68 aa7.2□□□□□ -1.26
SNF8-206ENST00000509989 GHRHP01286 108 aa7.2□□□□□ -1.26
SNF8-206ENST00000509989 DEFB116Q30KQ4 102 aa7.2□□□□□ -1.26
SNF8-206ENST00000509989 TRBV7-4A0A0J9YYF1 115 aa7.19□□□□□ -1.26
SNF8-206ENST00000509989 CCKP06307 115 aa7.19□□□□□ -1.26
SNF8-206ENST00000509989 SS18L2Q9UHA2 77 aa7.19□□□□□ -1.26
SNF8-206ENST00000509989 DSCR10P59022 87 aa7.17□□□□□ -1.26
SNF8-206ENST00000509989 H3BQ85 93 aa7.16□□□□□ -1.26
SNF8-206ENST00000509989 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
SNF8-206ENST00000509989 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
SNF8-206ENST00000509989 TAX1BP3O14907 124 aa7.15□□□□□ -1.26
SNF8-206ENST00000509989 ATXN8Q156A1 80 aa7.15□□□□□ -1.26
SNF8-206ENST00000509989 LINC00472Q9H8W2 130 aa7.15□□□□□ -1.26
SNF8-206ENST00000509989 RBM3P98179 157 aaKnown RBP7.14□□□□□ -1.27
SNF8-206ENST00000509989 SIGMAR1Q99720 223 aa7.14□□□□□ -1.27
SNF8-206ENST00000509989 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
SNF8-206ENST00000509989 Q75L30 129 aa7.12□□□□□ -1.27
SNF8-206ENST00000509989 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
SNF8-206ENST00000509989 C9orf118A6NHY6 69 aa7.1□□□□□ -1.27
SNF8-206ENST00000509989 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
SNF8-206ENST00000509989 C9JAW5 83 aa7.1□□□□□ -1.27
SNF8-206ENST00000509989 COL5A1-AS1Q5SY13 56 aa7.1□□□□□ -1.27
SNF8-206ENST00000509989 A8MUU9 505 aa7.09□□□□□ -1.27
SNF8-206ENST00000509989 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
SNF8-206ENST00000509989 Q6ZQT0 140 aa7.09□□□□□ -1.27
SNF8-206ENST00000509989 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
SNF8-206ENST00000509989 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
SNF8-206ENST00000509989 MT1HP80294 61 aa7.08□□□□□ -1.28
SNF8-206ENST00000509989 C14orf132Q9NPU4 83 aa7.08□□□□□ -1.28
SNF8-206ENST00000509989 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
SNF8-206ENST00000509989 IGHV6-1A0A0B4J1U7 121 aa7.05□□□□□ -1.28
SNF8-206ENST00000509989 LINC00313P59037 77 aa7.05□□□□□ -1.28
SNF8-206ENST00000509989 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 1519.4 ms