RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TENM3Q9P273 2699 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 LOC107984640A0A0U1RRK4 108 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 A0A1B0GW54 56 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 LINC00526Q96FQ7 95 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 XAGE1AQ9HD64 81 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 APLNQ9ULZ1 77 aa4.18□□□□□ -1.74
TRAPPC11-206ENST00000509857 SPRR1AP35321 89 aa4.17□□□□□ -1.74
TRAPPC11-206ENST00000509857 RBM3P98179 157 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-206ENST00000509857 Q6JHZ5 121 aa4.17□□□□□ -1.74
TRAPPC11-206ENST00000509857 NBEAL1Q6ZS30 2694 aa4.16□□□□□ -1.74
TRAPPC11-206ENST00000509857 CASC10Q5T4H9 136 aa4.16□□□□□ -1.74
TRAPPC11-206ENST00000509857 C14orf132Q9NPU4 83 aa4.16□□□□□ -1.74
TRAPPC11-206ENST00000509857 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.74
TRAPPC11-206ENST00000509857 Q6ZQY7 126 aa4.15□□□□□ -1.75
TRAPPC11-206ENST00000509857 DSCR8Q96T75 97 aa4.15□□□□□ -1.75
TRAPPC11-206ENST00000509857 IGLV1-50A0A075B6I6 118 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 TRBV7-4A0A0J9YYF1 115 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 C16orf90A8MZG2 172 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 Q6ZQT0 140 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 UBE2DNLQ8IWF7 75 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 UBL5Q9BZL1 73 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 LAMTOR3Q9UHA4 124 aa4.14□□□□□ -1.75
TRAPPC11-206ENST00000509857 KRTAP4-16G5E9R7 235 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 BCE1O60756 84 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 Q6ZRX8 168 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 SMCR5Q8TEV8 140 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 LINC00846Q9NV44 126 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 LINC00474Q9P2X8 69 aa4.13□□□□□ -1.75
TRAPPC11-206ENST00000509857 PSCAO43653 123 aa4.12□□□□□ -1.75
TRAPPC11-206ENST00000509857 KRTAP21-3Q3LHN1 58 aa4.12□□□□□ -1.75
TRAPPC11-206ENST00000509857 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
TRAPPC11-206ENST00000509857 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 NBDYA0A0U1RRE5 68 aa4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 HIST1H4AP62805 103 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 HUWE1Q7Z6Z7 4374 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-206ENST00000509857 STAB2Q8WWQ8 2551 aa4.1□□□□□ -1.75
TRAPPC11-206ENST00000509857 ATOX1O00244 68 aa4.1□□□□□ -1.75
TRAPPC11-206ENST00000509857 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
TRAPPC11-206ENST00000509857 FAM236AA0A1B0GUQ0 79 aa4.08□□□□□ -1.76
TRAPPC11-206ENST00000509857 FAM236BA0A1B0GV22 79 aa4.08□□□□□ -1.76
TRAPPC11-206ENST00000509857 LRCOL1A6NCL2 159 aa4.08□□□□□ -1.76
TRAPPC11-206ENST00000509857 Q6ZRN7 208 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-206ENST00000509857 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
TRAPPC11-206ENST00000509857 SMIM20Q8N5G0 67 aa4.07□□□□□ -1.76
TRAPPC11-206ENST00000509857 A0A096LNI7 61 aa4.06□□□□□ -1.76
TRAPPC11-206ENST00000509857 UQCRQO14949 82 aa4.06□□□□□ -1.76
TRAPPC11-206ENST00000509857 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
TRAPPC11-206ENST00000509857 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-206ENST00000509857 Q9BRP9 147 aa4.06□□□□□ -1.76
TRAPPC11-206ENST00000509857 DYNC2H1Q8NCM8 4307 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-206ENST00000509857 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
TRAPPC11-206ENST00000509857 SPRR1BP22528 89 aa4.05□□□□□ -1.76
TRAPPC11-206ENST00000509857 SPRR4Q96PI1 79 aa4.05□□□□□ -1.76
TRAPPC11-206ENST00000509857 COX7CP15954 63 aa4.04□□□□□ -1.76
TRAPPC11-206ENST00000509857 UBE2BP63146 152 aa4.04□□□□□ -1.76
TRAPPC11-206ENST00000509857 C3orf22Q8N5N4 141 aa4.04□□□□□ -1.76
TRAPPC11-206ENST00000509857 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
TRAPPC11-206ENST00000509857 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 IGKV3D-7A0A0C4DH55 119 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 F8WEM9 126 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
TRAPPC11-206ENST00000509857 CRYGAP11844 174 aa4.02□□□□□ -1.77
TRAPPC11-206ENST00000509857 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-206ENST00000509857 NREPQ16612 68 aa4.02□□□□□ -1.77
TRAPPC11-206ENST00000509857 C1orf137Q5JT78 98 aa4.02□□□□□ -1.77
TRAPPC11-206ENST00000509857 A0A087WTM6 91 aa4.01□□□□□ -1.77
TRAPPC11-206ENST00000509857 HAMPP81172 84 aa4.01□□□□□ -1.77
TRAPPC11-206ENST00000509857 FAM19A1Q7Z5A9 133 aa4.01□□□□□ -1.77
TRAPPC11-206ENST00000509857 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
TRAPPC11-206ENST00000509857 IGLV2-33A0A075B6J2 118 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-206ENST00000509857 IGKV2-24A0A0C4DH68 120 aa4□□□□□ -1.77
TRAPPC11-206ENST00000509857 M0R2N4 97 aa4□□□□□ -1.77
TRAPPC11-206ENST00000509857 KRTAP13-1Q8IUC0 172 aa4□□□□□ -1.77
TRAPPC11-206ENST00000509857 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 BPY2O14599 106 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 ERC2-IT1O76042 136 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 DEFB105AQ8NG35 78 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
TRAPPC11-206ENST00000509857 UBE2AP49459 152 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 SEC61GP60059 68 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 C1orf134Q5TEV5 83 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
TRAPPC11-206ENST00000509857 A0A087WVE0 104 aa3.97□□□□□ -1.77
TRAPPC11-206ENST00000509857 C3orf84H3BNL1 204 aa3.97□□□□□ -1.77
TRAPPC11-206ENST00000509857 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
TRAPPC11-206ENST00000509857 IGKV4-1P06312 121 aa3.96□□□□□ -1.78
TRAPPC11-206ENST00000509857 PRLHP81277 87 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms