RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 FN1P02751 2386 aaKnown RBP2.41□□□□□ -2.02
SPARCL1-206ENST00000509407 ANGP03950 147 aaKnown RBP2.41□□□□□ -2.02
SPARCL1-206ENST00000509407 CRIP1P50238 77 aa2.41□□□□□ -2.02
SPARCL1-206ENST00000509407 SPINK13Q1W4C9 94 aa2.41□□□□□ -2.02
SPARCL1-206ENST00000509407 ZFHX3Q15911 3703 aa2.4□□□□□ -2.02
SPARCL1-206ENST00000509407 WDFY3Q8IZQ1 3526 aa2.4□□□□□ -2.02
SPARCL1-206ENST00000509407 LAMA5O15230 3695 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 ATMQ13315 3056 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 STATHP02808 62 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 KRTAP1-4P0C5Y4 121 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 LINC00158P58513 81 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 HELZ2Q9BYK8 2649 aaKnown RBP2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 TLN1Q9Y490 2541 aaKnown RBP2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 MGAQ8IWI9 3026 aa2.4□□□□□ -2.03
SPARCL1-206ENST00000509407 LOC400499M0QZD8 3231 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 IGFL1Q6UW32 110 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 FLNBO75369 2602 aaKnown RBP2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 SPTBN1Q01082 2364 aaKnown RBP2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 BOD1L1Q8NFC6 3051 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 DOPEY2Q9Y3R5 2298 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 SHANK1Q9Y566 2161 aa2.39□□□□□ -2.03
SPARCL1-206ENST00000509407 PRRC2CQ9Y520 2896 aaKnown RBP2.38□□□□□ -2.03
SPARCL1-206ENST00000509407 ASH1LQ9NR48 2969 aaKnown RBP2.38□□□□□ -2.03
SPARCL1-206ENST00000509407 LRRK2Q5S007 2527 aa2.38□□□□□ -2.03
SPARCL1-206ENST00000509407 ZFHX4Q86UP3 3567 aa2.38□□□□□ -2.03
SPARCL1-206ENST00000509407 CNTRLQ7Z7A1 2325 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 CELSR3Q9NYQ7 3312 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 NBASA2RRP1 2371 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 Q8IZM0 81 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 LINC00308Q8TCZ7 52 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 CDKN2A-AS1Q9UH64 79 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 SPTAN1Q13813 2472 aaKnown RBP2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 UBR5O95071 2799 aaPredicted RBP2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 SMG1Q96Q15 3661 aaKnown RBP2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 HECTD1Q9ULT8 2610 aa2.37□□□□□ -2.03
SPARCL1-206ENST00000509407 CREBBPQ92793 2442 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 CRIPTQ9P021 101 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 PTPN13Q12923 2485 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 CFAP46Q8IYW2 2715 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 TENM4Q6N022 2769 aa2.36□□□□□ -2.03
SPARCL1-206ENST00000509407 SETXQ7Z333 2677 aaKnown RBP2.35□□□□□ -2.03
SPARCL1-206ENST00000509407 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
SPARCL1-206ENST00000509407 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
SPARCL1-206ENST00000509407 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
SPARCL1-206ENST00000509407 ICE1Q9Y2F5 2266 aa2.35□□□□□ -2.03
SPARCL1-206ENST00000509407 MAST4O15021 2626 aa2.34□□□□□ -2.03
SPARCL1-206ENST00000509407 TFF3Q07654 80 aa2.34□□□□□ -2.03
SPARCL1-206ENST00000509407 UNQ6190/PRO20217Q6UXQ8 127 aa2.34□□□□□ -2.03
SPARCL1-206ENST00000509407 UBE2DNLQ8IWF7 75 aa2.34□□□□□ -2.03
SPARCL1-206ENST00000509407 MYO9AB2RTY4 2548 aa2.34□□□□□ -2.04
SPARCL1-206ENST00000509407 DOPEY1Q5JWR5 2465 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 ANKRD17O75179 2603 aaKnown RBP2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 ABCA1O95477 2261 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 FLNCQ14315 2725 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 NDUFA1O15239 70 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 HIVEP3Q5T1R4 2406 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 USP9YO00507 2555 aaPredicted RBP2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 BSNQ9UPA5 3926 aa2.33□□□□□ -2.04
SPARCL1-206ENST00000509407 CENPEQ02224 2701 aa2.32□□□□□ -2.04
SPARCL1-206ENST00000509407 RPL37P61927 97 aaKnown RBP2.32□□□□□ -2.04
SPARCL1-206ENST00000509407 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SPARCL1-206ENST00000509407 IAPPP10997 89 aa2.31□□□□□ -2.04
SPARCL1-206ENST00000509407 RPS27LQ71UM5 84 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-206ENST00000509407 PKDREJQ9NTG1 2253 aa2.31□□□□□ -2.04
SPARCL1-206ENST00000509407 USP9XQ93008 2570 aaPredicted RBP2.31□□□□□ -2.04
SPARCL1-206ENST00000509407 UNC79Q9P2D8 2635 aa2.31□□□□□ -2.04
SPARCL1-206ENST00000509407 PCNX1Q96RV3 2341 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 USMG5Q96IX5 58 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 CADP27708 2225 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 ANKHD1Q8IWZ3 2542 aaKnown RBP2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 TEX15Q9BXT5 2789 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 CRYBG3Q68DQ2 2970 aa2.3□□□□□ -2.04
SPARCL1-206ENST00000509407 LYNX1G3V0Z9 82 aa2.29□□□□□ -2.04
SPARCL1-206ENST00000509407 UTP20O75691 2785 aaKnown RBP2.29□□□□□ -2.04
SPARCL1-206ENST00000509407 ABCA12Q86UK0 2595 aa2.28□□□□□ -2.04
SPARCL1-206ENST00000509407 K7EQZ3 153 aa2.28□□□□□ -2.04
SPARCL1-206ENST00000509407 TP53AIP1Q9HCN2 124 aa2.28□□□□□ -2.04
SPARCL1-206ENST00000509407 CELSR2Q9HCU4 2923 aa2.28□□□□□ -2.04
SPARCL1-206ENST00000509407 CCDC168Q8NDH2 2452 aa2.28□□□□□ -2.04
SPARCL1-206ENST00000509407 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
SPARCL1-206ENST00000509407 ARHGAP5-AS1Q96IT6 56 aa2.27□□□□□ -2.05
SPARCL1-206ENST00000509407 SPG11Q96JI7 2443 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 MRPL34Q9BQ48 92 aaKnown RBP2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 ITPR2Q14571 2701 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 LRBAP50851 2863 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 APCP25054 2843 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 RELNP78509 3460 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
SPARCL1-206ENST00000509407 ADGRG4Q8IZF6 3080 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 NBPF19A0A087WUL8 3843 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 DEFB108AA8MXU0 73 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 PRB3Q04118 309 aaPredicted RBP2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 KRTAP21-3Q3LHN1 58 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 F8P00451 2351 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms