RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
HMGCL-208ENST00000509389 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
HMGCL-208ENST00000509389 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
HMGCL-208ENST00000509389 ANKRD29Q8N6D5 301 aa8.7□□□□□ -1.02
HMGCL-208ENST00000509389 SNCGO76070 127 aa8.69□□□□□ -1.02
HMGCL-208ENST00000509389 Q6ZQY7 126 aa8.69□□□□□ -1.02
HMGCL-208ENST00000509389 ORMDL1Q9P0S3 153 aa8.69□□□□□ -1.02
HMGCL-208ENST00000509389 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
HMGCL-208ENST00000509389 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
HMGCL-208ENST00000509389 PRLHP81277 87 aa8.68□□□□□ -1.02
HMGCL-208ENST00000509389 OCIAD2Q56VL3 154 aa8.68□□□□□ -1.02
HMGCL-208ENST00000509389 H3BQ85 93 aa8.67□□□□□ -1.02
HMGCL-208ENST00000509389 ZNF861PO60384 105 aa8.67□□□□□ -1.02
HMGCL-208ENST00000509389 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
HMGCL-208ENST00000509389 PPDPFLQ8WWR9 84 aa8.66□□□□□ -1.02
HMGCL-208ENST00000509389 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.02
HMGCL-208ENST00000509389 TEN1Q86WV5 123 aa8.65□□□□□ -1.02
HMGCL-208ENST00000509389 TMEM256-PLSCR3K7ERE1 68 aa8.63□□□□□ -1.03
HMGCL-208ENST00000509389 UBE2AP49459 152 aa8.63□□□□□ -1.03
HMGCL-208ENST00000509389 PRR4Q16378 134 aa8.63□□□□□ -1.03
HMGCL-208ENST00000509389 OBSCN-AS1Q96MR7 158 aa8.63□□□□□ -1.03
HMGCL-208ENST00000509389 GHRHP01286 108 aa8.62□□□□□ -1.03
HMGCL-208ENST00000509389 ETDBQ3ZM63 59 aa8.62□□□□□ -1.03
HMGCL-208ENST00000509389 SPRR1BP22528 89 aa8.61□□□□□ -1.03
HMGCL-208ENST00000509389 Q8N377 158 aa8.61□□□□□ -1.03
HMGCL-208ENST00000509389 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
HMGCL-208ENST00000509389 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
HMGCL-208ENST00000509389 A0A087X002 238 aa8.58□□□□□ -1.04
HMGCL-208ENST00000509389 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
HMGCL-208ENST00000509389 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
HMGCL-208ENST00000509389 SMIM29Q86T20 159 aa8.57□□□□□ -1.04
HMGCL-208ENST00000509389 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
HMGCL-208ENST00000509389 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
HMGCL-208ENST00000509389 CRYGAP11844 174 aa8.55□□□□□ -1.04
HMGCL-208ENST00000509389 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
HMGCL-208ENST00000509389 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
HMGCL-208ENST00000509389 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
HMGCL-208ENST00000509389 TYMSOSQ8TAI1 123 aa8.54□□□□□ -1.04
HMGCL-208ENST00000509389 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
HMGCL-208ENST00000509389 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
HMGCL-208ENST00000509389 MUC2Q02817 5179 aa8.53□□□□□ -1.04
HMGCL-208ENST00000509389 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
HMGCL-208ENST00000509389 TRBV7-4A0A0J9YYF1 115 aa8.51□□□□□ -1.05
HMGCL-208ENST00000509389 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
HMGCL-208ENST00000509389 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
HMGCL-208ENST00000509389 DEFB105AQ8NG35 78 aa8.5□□□□□ -1.05
HMGCL-208ENST00000509389 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
HMGCL-208ENST00000509389 LAMTOR3Q9UHA4 124 aa8.48□□□□□ -1.05
HMGCL-208ENST00000509389 RBM3P98179 157 aaKnown RBP8.48□□□□□ -1.05
HMGCL-208ENST00000509389 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
HMGCL-208ENST00000509389 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
HMGCL-208ENST00000509389 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
HMGCL-208ENST00000509389 Q6ZQT0 140 aa8.47□□□□□ -1.05
HMGCL-208ENST00000509389 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
HMGCL-208ENST00000509389 PDE6GP18545 87 aa8.46□□□□□ -1.06
HMGCL-208ENST00000509389 C21orf62-AS1Q17RA5 79 aa8.46□□□□□ -1.06
HMGCL-208ENST00000509389 K7ERU9 68 aa8.45□□□□□ -1.06
HMGCL-208ENST00000509389 A0A0U1RQV1 116 aa8.44□□□□□ -1.06
HMGCL-208ENST00000509389 LINC00304Q8N9R0 145 aa8.44□□□□□ -1.06
HMGCL-208ENST00000509389 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
HMGCL-208ENST00000509389 J3QR89 54 aa8.43□□□□□ -1.06
HMGCL-208ENST00000509389 CCKP06307 115 aa8.43□□□□□ -1.06
HMGCL-208ENST00000509389 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
HMGCL-208ENST00000509389 F8WEM9 126 aa8.42□□□□□ -1.06
HMGCL-208ENST00000509389 A0A1B0GV72 72 aa8.41□□□□□ -1.06
HMGCL-208ENST00000509389 Q6JHZ5 121 aa8.4□□□□□ -1.06
HMGCL-208ENST00000509389 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
HMGCL-208ENST00000509389 ACYP1P07311 99 aa8.38□□□□□ -1.07
HMGCL-208ENST00000509389 Q8NBF4 154 aa8.38□□□□□ -1.07
HMGCL-208ENST00000509389 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
HMGCL-208ENST00000509389 A0A1B0GW54 56 aa8.37□□□□□ -1.07
HMGCL-208ENST00000509389 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
HMGCL-208ENST00000509389 Q6Q795 121 aa8.37□□□□□ -1.07
HMGCL-208ENST00000509389 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
HMGCL-208ENST00000509389 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
HMGCL-208ENST00000509389 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
HMGCL-208ENST00000509389 CDIP1Q9H305 208 aa8.35□□□□□ -1.07
HMGCL-208ENST00000509389 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
HMGCL-208ENST00000509389 MOBPQ13875 183 aa8.34□□□□□ -1.07
HMGCL-208ENST00000509389 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
HMGCL-208ENST00000509389 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
HMGCL-208ENST00000509389 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
HMGCL-208ENST00000509389 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
HMGCL-208ENST00000509389 LINC00846Q9NV44 126 aa8.32□□□□□ -1.08
HMGCL-208ENST00000509389 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
HMGCL-208ENST00000509389 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
HMGCL-208ENST00000509389 CD164Q04900 197 aa8.29□□□□□ -1.08
HMGCL-208ENST00000509389 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
HMGCL-208ENST00000509389 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
HMGCL-208ENST00000509389 VPS25Q9BRG1 176 aa8.26□□□□□ -1.09
HMGCL-208ENST00000509389 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
HMGCL-208ENST00000509389 Q6ZVQ6 151 aa8.23□□□□□ -1.09
HMGCL-208ENST00000509389 LINC00643Q86TS7 51 aa8.22□□□□□ -1.09
HMGCL-208ENST00000509389 A0A087WSZ3 146 aa8.22□□□□□ -1.09
HMGCL-208ENST00000509389 Q5XG85 94 aa8.22□□□□□ -1.09
HMGCL-208ENST00000509389 UBL5Q9BZL1 73 aa8.22□□□□□ -1.09
HMGCL-208ENST00000509389 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
HMGCL-208ENST00000509389 SPINK1P00995 79 aa8.2□□□□□ -1.1
HMGCL-208ENST00000509389 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
HMGCL-208ENST00000509389 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms