RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 ZNF815PA8K554 130 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 H3BUA1 57 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 P0C880 135 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 DEFA4P12838 97 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 HCP5Q6MZN7 132 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 TMEM14BQ9NUH8 114 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 TRAV12-3A0A0B4J271 114 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 LOC107984156A0A0G2JMH3 177 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 A0A1W2PNN7 141 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 NDUFB1O75438 58 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 MGST1P10620 155 aaKnown RBP1.16□□□□□ -2.22
PDE4D-218ENST00000509368 CAV3P56539 151 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 BRD3OSQ6XYD6 125 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 ARL17AQ8IVW1 177 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 SMIM4Q8WVI0 70 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 CMC2Q9NRP2 79 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 ABRACLQ9P1F3 81 aa1.16□□□□□ -2.22
PDE4D-218ENST00000509368 F8WEM9 126 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 ZCCHC23Q6ZST2 131 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 DEFB107AQ8IZN7 70 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 STARD9Q9P2P6 4700 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 DNAH10Q8IVF4 4471 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 HECTD4Q9Y4D8 3996 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 NEBP20929 6669 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 ALMS1Q8TCU4 4167 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 IGKV1D-42A0A075B6H8 117 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 TRBV30A0A0K0K1B3 111 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 NUPR2A6NF83 97 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 HMGN4O00479 90 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 ARMS2P0C7Q2 107 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 CNBPP62633 177 aaKnown RBP1.15□□□□□ -2.23
PDE4D-218ENST00000509368 C10orf113Q5VZT2 155 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 FAM223AQ8IWN6 122 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 LINC00304Q8N9R0 145 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 ARL2-SNX15V9GYD0 113 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 MUC4Q99102 2169 aa1.15□□□□□ -2.23
PDE4D-218ENST00000509368 TRBV7-4A0A0J9YYF1 115 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 CHKB-CPT1BH3BT56 60 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 C20orf197Q8N268 126 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 NDUFA4L2Q9NRX3 87 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 ORMDL1Q9P0S3 153 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 FRAS1Q86XX4 4008 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 FAM223BA6NKX1 122 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 IGKV1-17P01599 117 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 KRTAP10-8P60410 259 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 RPS27LQ71UM5 84 aaKnown RBP1.14□□□□□ -2.23
PDE4D-218ENST00000509368 SPTSSBQ8NFR3 76 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 PLAC8Q9NZF1 115 aa1.14□□□□□ -2.23
PDE4D-218ENST00000509368 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 H3BUX3 64 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 LEPROTL1O95214 131 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 KIAA1109Q2LD37 5005 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 DYNC1H1Q14204 4646 aaKnown RBP1.13□□□□□ -2.23
PDE4D-218ENST00000509368 RPL38P63173 70 aaKnown RBP1.13□□□□□ -2.23
PDE4D-218ENST00000509368 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 LINC01558Q9Y6Z2 57 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 R4GMQ9 66 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 DNAH11Q96DT5 4516 aa1.13□□□□□ -2.23
PDE4D-218ENST00000509368 TRGV4A0A0C4DH28 118 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 A0A1B0GUT8 65 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 PPYP01298 95 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 SERF2P84101 59 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 COX17Q14061 63 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 Q8TAT8 98 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 DNAH17Q9UFH2 4485 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 FAT2Q9NYQ8 4349 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 D6R8Y8 96 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 UQCR11O14957 56 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 ZNF137PP52743 207 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 LINC00322Q6ZN03 302 aaPredicted RBP1.12□□□□□ -2.23
PDE4D-218ENST00000509368 MUSTN1Q8IVN3 82 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 C9orf163Q8N9P6 203 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 MRPL36Q9P0J6 103 aaKnown RBP1.12□□□□□ -2.23
PDE4D-218ENST00000509368 GNG13Q9P2W3 67 aa1.12□□□□□ -2.23
PDE4D-218ENST00000509368 TRAV1-2A0A0B4J238 106 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 LINC01546A6NGU7 62 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 LINC01549A6NIU2 74 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 H3BRN7 92 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 K7EMI3 77 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 S100A3P33764 101 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 TPRXLQ17RH7 258 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 OBSCN-AS1Q96MR7 158 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 PSENENQ9NZ42 101 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 HILPDAQ9Y5L2 63 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 ABCA13Q86UQ4 5058 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 PDE6GP18545 87 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 SNRPGP62308 76 aaKnown RBP1.11□□□□□ -2.23
PDE4D-218ENST00000509368 SPAG11BQ08648 103 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 DEFB114Q30KQ6 69 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 SPAG11AQ6PDA7 123 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 GAFA1Q96PS6 74 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 KMT2AQ03164 3969 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 PKD1P98161 4303 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 DNAH2Q9P225 4427 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 HERC1Q15751 4861 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 IGKV3-7A0A075B6H7 116 aa1.11□□□□□ -2.23
PDE4D-218ENST00000509368 A0A0G2JQZ4 141 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms