RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ZNF462Q96JM2 2506 aa1.23□□□□□ -2.21
GYPA-205ENST00000508337 DEFB109BQ30KR1 87 aa1.22□□□□□ -2.21
GYPA-205ENST00000508337 H3BUA1 57 aa1.21□□□□□ -2.22
GYPA-205ENST00000508337 CACNA1HO95180 2353 aa1.21□□□□□ -2.22
GYPA-205ENST00000508337 PKDREJQ9NTG1 2253 aa1.2□□□□□ -2.22
GYPA-205ENST00000508337 BPTFQ12830 3046 aa1.2□□□□□ -2.22
GYPA-205ENST00000508337 S4R3F8 94 aa1.2□□□□□ -2.22
GYPA-205ENST00000508337 CDC42BPAQ5VT25 1732 aa1.2□□□□□ -2.22
GYPA-205ENST00000508337 DEFB106AQ8N104 65 aa1.19□□□□□ -2.22
GYPA-205ENST00000508337 TTC28Q96AY4 2481 aa1.17□□□□□ -2.22
GYPA-205ENST00000508337 MEGF8Q7Z7M0 2845 aa1.16□□□□□ -2.22
GYPA-205ENST00000508337 ALMS1Q8TCU4 4167 aa1.16□□□□□ -2.22
GYPA-205ENST00000508337 F8P00451 2351 aa1.16□□□□□ -2.22
GYPA-205ENST00000508337 KNL1Q8NG31 2342 aa1.16□□□□□ -2.22
GYPA-205ENST00000508337 ZNF292O60281 2723 aa1.16□□□□□ -2.22
GYPA-205ENST00000508337 IGLV5-48A0A075B6I7 105 aa1.15□□□□□ -2.23
GYPA-205ENST00000508337 GVINP1Q7Z2Y8 2422 aa1.14□□□□□ -2.23
GYPA-205ENST00000508337 ABCA12Q86UK0 2595 aa1.13□□□□□ -2.23
GYPA-205ENST00000508337 DEFB131AP59861 70 aa1.13□□□□□ -2.23
GYPA-205ENST00000508337 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
GYPA-205ENST00000508337 TPRP12270 2363 aaKnown RBP1.13□□□□□ -2.23
GYPA-205ENST00000508337 MMP24-AS1A0A0U1RRL7 71 aa1.12□□□□□ -2.23
GYPA-205ENST00000508337 SPINK1P00995 79 aa1.12□□□□□ -2.23
GYPA-205ENST00000508337 PDE4DIPQ5VU43 2346 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 SPINK6Q6UWN8 80 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 POLQO75417 2590 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 MROH2BQ7Z745 1585 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 PCNX1Q96RV3 2341 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
GYPA-205ENST00000508337 POLR2KP53803 58 aaKnown RBP1.1□□□□□ -2.23
GYPA-205ENST00000508337 DSPP15924 2871 aaKnown RBP1.1□□□□□ -2.23
GYPA-205ENST00000508337 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
GYPA-205ENST00000508337 AKAP6Q13023 2319 aa1.09□□□□□ -2.23
GYPA-205ENST00000508337 RPL39LQ96EH5 51 aaKnown RBP1.09□□□□□ -2.23
GYPA-205ENST00000508337 ARHGAP5-AS1Q96IT6 56 aa1.09□□□□□ -2.23
GYPA-205ENST00000508337 DUOX1Q9NRD9 1551 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 CELSR2Q9HCU4 2923 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 H0YGG7 62 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 LEAP2Q969E1 77 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 NOP10Q9NPE3 64 aaKnown RBP1.08□□□□□ -2.24
GYPA-205ENST00000508337 REV3LO60673 3130 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 IGF2RP11717 2491 aa1.08□□□□□ -2.24
GYPA-205ENST00000508337 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
GYPA-205ENST00000508337 DEFB135Q30KP9 77 aa1.06□□□□□ -2.24
GYPA-205ENST00000508337 CHD9Q3L8U1 2897 aa1.05□□□□□ -2.24
GYPA-205ENST00000508337 TRANK1O15050 2925 aa1.04□□□□□ -2.24
GYPA-205ENST00000508337 CLTCL1P53675 1640 aa1.04□□□□□ -2.24
GYPA-205ENST00000508337 BDP1A6H8Y1 2624 aa1.03□□□□□ -2.24
GYPA-205ENST00000508337 PIEZO1Q92508 2521 aa1.03□□□□□ -2.24
GYPA-205ENST00000508337 SMR3AQ99954 134 aa1.03□□□□□ -2.24
GYPA-205ENST00000508337 A8MTW9 85 aa1.02□□□□□ -2.25
GYPA-205ENST00000508337 M0R2T5 61 aa1.02□□□□□ -2.25
GYPA-205ENST00000508337 TTTY10Q9BZA0 68 aa1.02□□□□□ -2.25
GYPA-205ENST00000508337 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
GYPA-205ENST00000508337 CLPSL2Q6UWE3 100 aa1.01□□□□□ -2.25
GYPA-205ENST00000508337 M0QY20 66 aa1□□□□□ -2.25
GYPA-205ENST00000508337 TOMM7Q9P0U1 55 aa1□□□□□ -2.25
GYPA-205ENST00000508337 ATRQ13535 2644 aa1□□□□□ -2.25
GYPA-205ENST00000508337 NOTCH1P46531 2555 aa1□□□□□ -2.25
GYPA-205ENST00000508337 TENM4Q6N022 2769 aa0.98□□□□□ -2.25
GYPA-205ENST00000508337 HECTD1Q9ULT8 2610 aa0.98□□□□□ -2.25
GYPA-205ENST00000508337 U3KQA8 63 aa0.98□□□□□ -2.25
GYPA-205ENST00000508337 ZNF469Q96JG9 3925 aaPredicted RBP0.97□□□□□ -2.25
GYPA-205ENST00000508337 GCC2Q8IWJ2 1684 aa0.97□□□□□ -2.25
GYPA-205ENST00000508337 H3BSH0 61 aa0.97□□□□□ -2.25
GYPA-205ENST00000508337 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
GYPA-205ENST00000508337 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
GYPA-205ENST00000508337 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
GYPA-205ENST00000508337 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
GYPA-205ENST00000508337 DEFB104AQ8WTQ1 72 aa0.96□□□□□ -2.26
GYPA-205ENST00000508337 PKD1L2Q7Z442 2459 aa0.96□□□□□ -2.26
GYPA-205ENST00000508337 CHD6Q8TD26 2715 aa0.95□□□□□ -2.26
GYPA-205ENST00000508337 AKAP13Q12802 2813 aa0.95□□□□□ -2.26
GYPA-205ENST00000508337 SPTA1P02549 2419 aa0.95□□□□□ -2.26
GYPA-205ENST00000508337 FBN2P35556 2912 aa0.95□□□□□ -2.26
GYPA-205ENST00000508337 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
GYPA-205ENST00000508337 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
GYPA-205ENST00000508337 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
GYPA-205ENST00000508337 VWFP04275 2813 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 CSMD3Q7Z407 3707 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 H3BNG1 76 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 M0QZ58 72 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 PRM1P04553 51 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 LINC01590Q5TEZ4 76 aa0.91□□□□□ -2.26
GYPA-205ENST00000508337 NCOR1O75376 2440 aa0.9□□□□□ -2.27
GYPA-205ENST00000508337 APCP25054 2843 aa0.9□□□□□ -2.27
GYPA-205ENST00000508337 CEP290O15078 2479 aa0.9□□□□□ -2.27
GYPA-205ENST00000508337 PRRC2CQ9Y520 2896 aaKnown RBP0.88□□□□□ -2.27
GYPA-205ENST00000508337 PRCDQ00LT1 54 aa0.87□□□□□ -2.27
GYPA-205ENST00000508337 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
GYPA-205ENST00000508337 SRRM2Q9UQ35 2752 aaKnown RBP0.86□□□□□ -2.27
GYPA-205ENST00000508337 CELSR1Q9NYQ6 3014 aa0.85□□□□□ -2.27
GYPA-205ENST00000508337 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
GYPA-205ENST00000508337 NBASA2RRP1 2371 aa0.85□□□□□ -2.27
GYPA-205ENST00000508337 TNRC18O15417 2968 aaPredicted RBP0.84□□□□□ -2.27
GYPA-205ENST00000508337 TNP1P09430 55 aa0.84□□□□□ -2.27
GYPA-205ENST00000508337 UBR5O95071 2799 aaPredicted RBP0.84□□□□□ -2.28
GYPA-205ENST00000508337 ANK2Q01484 3957 aa0.82□□□□□ -2.28
GYPA-205ENST00000508337 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
GYPA-205ENST00000508337 DEFB110Q30KQ9 67 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms