RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 BRCA2P51587 3418 aa5.07□□□□□ -1.6
PDE6A-202ENST00000508173 ITPR3Q14573 2671 aa5.06□□□□□ -1.6
PDE6A-202ENST00000508173 STAB1Q9NY15 2570 aa5.06□□□□□ -1.6
PDE6A-202ENST00000508173 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
PDE6A-202ENST00000508173 R4GN34 69 aa5.05□□□□□ -1.6
PDE6A-202ENST00000508173 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
PDE6A-202ENST00000508173 GCN1Q92616 2671 aaKnown RBP5.04□□□□□ -1.6
PDE6A-202ENST00000508173 FLNAP21333 2647 aaKnown RBP5.04□□□□□ -1.6
PDE6A-202ENST00000508173 Q8NDZ9 215 aa5.03□□□□□ -1.6
PDE6A-202ENST00000508173 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
PDE6A-202ENST00000508173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5□□□□□ -1.61
PDE6A-202ENST00000508173 CR1P17927 2039 aa5□□□□□ -1.61
PDE6A-202ENST00000508173 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
PDE6A-202ENST00000508173 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
PDE6A-202ENST00000508173 Q5VV11 94 aa4.99□□□□□ -1.61
PDE6A-202ENST00000508173 NOTCH1P46531 2555 aa4.99□□□□□ -1.61
PDE6A-202ENST00000508173 Q75L30 129 aa4.98□□□□□ -1.61
PDE6A-202ENST00000508173 DMAC1Q96GE9 116 aa4.97□□□□□ -1.61
PDE6A-202ENST00000508173 A0A1B0GU33 70 aa4.96□□□□□ -1.61
PDE6A-202ENST00000508173 LAMA3Q16787 3333 aa4.96□□□□□ -1.62
PDE6A-202ENST00000508173 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
PDE6A-202ENST00000508173 SZT2Q5T011 3432 aa4.95□□□□□ -1.62
PDE6A-202ENST00000508173 COL6A5A8TX70 2615 aa4.95□□□□□ -1.62
PDE6A-202ENST00000508173 SPINK7P58062 85 aa4.94□□□□□ -1.62
PDE6A-202ENST00000508173 UNC79Q9P2D8 2635 aa4.94□□□□□ -1.62
PDE6A-202ENST00000508173 XIRP2A4UGR9 3374 aa4.94□□□□□ -1.62
PDE6A-202ENST00000508173 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
PDE6A-202ENST00000508173 CHD7Q9P2D1 2997 aa4.91□□□□□ -1.62
PDE6A-202ENST00000508173 CDH23Q9H251 3354 aa4.91□□□□□ -1.62
PDE6A-202ENST00000508173 UNC80Q8N2C7 3258 aa4.9□□□□□ -1.62
PDE6A-202ENST00000508173 M0QZ58 72 aa4.9□□□□□ -1.62
PDE6A-202ENST00000508173 HTTP42858 3142 aa4.89□□□□□ -1.63
PDE6A-202ENST00000508173 CFAP54Q96N23 3096 aa4.89□□□□□ -1.63
PDE6A-202ENST00000508173 CHD6Q8TD26 2715 aa4.89□□□□□ -1.63
PDE6A-202ENST00000508173 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
PDE6A-202ENST00000508173 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
PDE6A-202ENST00000508173 CELSR3Q9NYQ7 3312 aa4.88□□□□□ -1.63
PDE6A-202ENST00000508173 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
PDE6A-202ENST00000508173 LAMA2P24043 3122 aaKnown RBP4.87□□□□□ -1.63
PDE6A-202ENST00000508173 CHD9Q3L8U1 2897 aa4.87□□□□□ -1.63
PDE6A-202ENST00000508173 ZNF292O60281 2723 aa4.87□□□□□ -1.63
PDE6A-202ENST00000508173 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
PDE6A-202ENST00000508173 RANBP2P49792 3224 aaKnown RBP4.84□□□□□ -1.63
PDE6A-202ENST00000508173 TRIOO75962 3097 aa4.84□□□□□ -1.63
PDE6A-202ENST00000508173 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
PDE6A-202ENST00000508173 A8MU10 97 aa4.82□□□□□ -1.64
PDE6A-202ENST00000508173 TRANK1O15050 2925 aa4.81□□□□□ -1.64
PDE6A-202ENST00000508173 IGSF10Q6WRI0 2623 aa4.8□□□□□ -1.64
PDE6A-202ENST00000508173 VCANP13611 3396 aa4.8□□□□□ -1.64
PDE6A-202ENST00000508173 Q6ZR54 194 aa4.79□□□□□ -1.64
PDE6A-202ENST00000508173 NBEAL1Q6ZS30 2694 aa4.79□□□□□ -1.64
PDE6A-202ENST00000508173 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
PDE6A-202ENST00000508173 SPTBN5Q9NRC6 3674 aaKnown RBP4.78□□□□□ -1.64
PDE6A-202ENST00000508173 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
PDE6A-202ENST00000508173 Q5W150 140 aa4.77□□□□□ -1.65
PDE6A-202ENST00000508173 MYO15AQ9UKN7 3530 aa4.77□□□□□ -1.65
PDE6A-202ENST00000508173 FREM2Q5SZK8 3169 aa4.76□□□□□ -1.65
PDE6A-202ENST00000508173 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
PDE6A-202ENST00000508173 PRRC2CQ9Y520 2896 aaKnown RBP4.75□□□□□ -1.65
PDE6A-202ENST00000508173 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
PDE6A-202ENST00000508173 SPEGQ15772 3267 aa4.74□□□□□ -1.65
PDE6A-202ENST00000508173 VPS13AQ96RL7 3174 aa4.74□□□□□ -1.65
PDE6A-202ENST00000508173 KRTAP26-1Q6PEX3 210 aa4.74□□□□□ -1.65
PDE6A-202ENST00000508173 A6NN06 94 aa4.73□□□□□ -1.65
PDE6A-202ENST00000508173 SPRR1AP35321 89 aa4.73□□□□□ -1.65
PDE6A-202ENST00000508173 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
PDE6A-202ENST00000508173 SPRR1BP22528 89 aa4.73□□□□□ -1.65
PDE6A-202ENST00000508173 TNRC18O15417 2968 aaPredicted RBP4.72□□□□□ -1.65
PDE6A-202ENST00000508173 CENPEQ02224 2701 aa4.71□□□□□ -1.66
PDE6A-202ENST00000508173 COL6A3P12111 3177 aa4.7□□□□□ -1.66
PDE6A-202ENST00000508173 KRTAP1-5Q9BYS1 174 aa4.7□□□□□ -1.66
PDE6A-202ENST00000508173 ROMO1P60602 79 aa4.7□□□□□ -1.66
PDE6A-202ENST00000508173 DMBT1Q9UGM3 2413 aaPredicted RBP4.69□□□□□ -1.66
PDE6A-202ENST00000508173 AKAP13Q12802 2813 aa4.68□□□□□ -1.66
PDE6A-202ENST00000508173 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
PDE6A-202ENST00000508173 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
PDE6A-202ENST00000508173 LAMA1P25391 3075 aa4.67□□□□□ -1.66
PDE6A-202ENST00000508173 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
PDE6A-202ENST00000508173 REV3LO60673 3130 aa4.66□□□□□ -1.66
PDE6A-202ENST00000508173 SPATA8Q6RVD6 105 aa4.66□□□□□ -1.66
PDE6A-202ENST00000508173 WDFY3Q8IZQ1 3526 aa4.66□□□□□ -1.66
PDE6A-202ENST00000508173 PRUNE2Q8WUY3 3088 aa4.65□□□□□ -1.66
PDE6A-202ENST00000508173 PANO1I0J062 215 aa4.65□□□□□ -1.67
PDE6A-202ENST00000508173 A0A087X002 238 aa4.65□□□□□ -1.67
PDE6A-202ENST00000508173 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
PDE6A-202ENST00000508173 ASB16-AS1Q495Z4 193 aa4.64□□□□□ -1.67
PDE6A-202ENST00000508173 A8MUU9 505 aa4.64□□□□□ -1.67
PDE6A-202ENST00000508173 FLG2Q5D862 2391 aaPredicted RBP4.64□□□□□ -1.67
PDE6A-202ENST00000508173 TENM4Q6N022 2769 aa4.63□□□□□ -1.67
PDE6A-202ENST00000508173 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
PDE6A-202ENST00000508173 ITPR2Q14571 2701 aa4.63□□□□□ -1.67
PDE6A-202ENST00000508173 KMT2BQ9UMN6 2715 aaPredicted RBP4.63□□□□□ -1.67
PDE6A-202ENST00000508173 WDFY4Q6ZS81 3184 aa4.63□□□□□ -1.67
PDE6A-202ENST00000508173 DCHS1Q96JQ0 3298 aa4.6□□□□□ -1.67
PDE6A-202ENST00000508173 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.68
PDE6A-202ENST00000508173 NSD1Q96L73 2696 aaPredicted RBP4.58□□□□□ -1.68
PDE6A-202ENST00000508173 FLNCQ14315 2725 aa4.58□□□□□ -1.68
PDE6A-202ENST00000508173 TNP1P09430 55 aa4.57□□□□□ -1.68
PDE6A-202ENST00000508173 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
PDE6A-202ENST00000508173 FRYQ5TBA9 3013 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms