RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 WFDC13Q8IUB5 93 aa8.48□□□□□ -1.05
SNCAIP-209ENST00000508017 LYSTQ99698 3801 aa8.47□□□□□ -1.05
SNCAIP-209ENST00000508017 A0A087WSZ3 146 aa8.45□□□□□ -1.06
SNCAIP-209ENST00000508017 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
SNCAIP-209ENST00000508017 HUWE1Q7Z6Z7 4374 aaKnown RBP8.45□□□□□ -1.06
SNCAIP-209ENST00000508017 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
SNCAIP-209ENST00000508017 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
SNCAIP-209ENST00000508017 A0A096LNI7 61 aa8.44□□□□□ -1.06
SNCAIP-209ENST00000508017 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
SNCAIP-209ENST00000508017 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
SNCAIP-209ENST00000508017 COL6A5A8TX70 2615 aa8.43□□□□□ -1.06
SNCAIP-209ENST00000508017 Q1T7F1 81 aa8.4□□□□□ -1.06
SNCAIP-209ENST00000508017 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
SNCAIP-209ENST00000508017 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
SNCAIP-209ENST00000508017 PSPHP1O15172 72 aa8.39□□□□□ -1.07
SNCAIP-209ENST00000508017 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
SNCAIP-209ENST00000508017 UBE2AP49459 152 aa8.38□□□□□ -1.07
SNCAIP-209ENST00000508017 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
SNCAIP-209ENST00000508017 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
SNCAIP-209ENST00000508017 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
SNCAIP-209ENST00000508017 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
SNCAIP-209ENST00000508017 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
SNCAIP-209ENST00000508017 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
SNCAIP-209ENST00000508017 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
SNCAIP-209ENST00000508017 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
SNCAIP-209ENST00000508017 MP68P56378 58 aa8.37□□□□□ -1.07
SNCAIP-209ENST00000508017 CHTF8P0CG12 524 aa8.35□□□□□ -1.07
SNCAIP-209ENST00000508017 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-209ENST00000508017 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-209ENST00000508017 NDUFB1O75438 58 aa8.34□□□□□ -1.07
SNCAIP-209ENST00000508017 CASC2Q6XLA1 102 aa8.34□□□□□ -1.07
SNCAIP-209ENST00000508017 H0Y9P7 68 aa8.33□□□□□ -1.08
SNCAIP-209ENST00000508017 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
SNCAIP-209ENST00000508017 B9D2Q9BPU9 175 aa8.31□□□□□ -1.08
SNCAIP-209ENST00000508017 COL7A1Q02388 2944 aa8.31□□□□□ -1.08
SNCAIP-209ENST00000508017 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
SNCAIP-209ENST00000508017 A8MUN3 132 aa8.3□□□□□ -1.08
SNCAIP-209ENST00000508017 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
SNCAIP-209ENST00000508017 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
SNCAIP-209ENST00000508017 A8MWP4 228 aa8.29□□□□□ -1.08
SNCAIP-209ENST00000508017 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
SNCAIP-209ENST00000508017 SPRR1BP22528 89 aa8.27□□□□□ -1.09
SNCAIP-209ENST00000508017 K7EIL1 84 aa8.26□□□□□ -1.09
SNCAIP-209ENST00000508017 A8MU10 97 aa8.25□□□□□ -1.09
SNCAIP-209ENST00000508017 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
SNCAIP-209ENST00000508017 H0Y9J4 135 aa8.24□□□□□ -1.09
SNCAIP-209ENST00000508017 Q5VV11 94 aa8.24□□□□□ -1.09
SNCAIP-209ENST00000508017 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
SNCAIP-209ENST00000508017 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
SNCAIP-209ENST00000508017 H3BPC8 53 aa8.23□□□□□ -1.09
SNCAIP-209ENST00000508017 V9GYY9 64 aa8.23□□□□□ -1.09
SNCAIP-209ENST00000508017 Q8N9P0 234 aaPredicted RBP8.21□□□□□ -1.09
SNCAIP-209ENST00000508017 PANO1I0J062 215 aa8.21□□□□□ -1.1
SNCAIP-209ENST00000508017 UBE2DNLQ8IWF7 75 aa8.2□□□□□ -1.1
SNCAIP-209ENST00000508017 MGAM2Q2M2H8 2515 aa8.2□□□□□ -1.1
SNCAIP-209ENST00000508017 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
SNCAIP-209ENST00000508017 PLECQ15149 4684 aaKnown RBP8.18□□□□□ -1.1
SNCAIP-209ENST00000508017 IGLV9-49A0A0B4J1Y8 123 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 Q96NJ1 140 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
SNCAIP-209ENST00000508017 COA5Q86WW8 74 aa8.16□□□□□ -1.1
SNCAIP-209ENST00000508017 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
SNCAIP-209ENST00000508017 PMAIP1Q13794 54 aa8.15□□□□□ -1.1
SNCAIP-209ENST00000508017 APLNQ9ULZ1 77 aa8.15□□□□□ -1.1
SNCAIP-209ENST00000508017 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
SNCAIP-209ENST00000508017 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
SNCAIP-209ENST00000508017 CD164Q04900 197 aa8.13□□□□□ -1.11
SNCAIP-209ENST00000508017 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
SNCAIP-209ENST00000508017 DNAH8Q96JB1 4490 aa8.11□□□□□ -1.11
SNCAIP-209ENST00000508017 MOBPQ13875 183 aa8.11□□□□□ -1.11
SNCAIP-209ENST00000508017 SEC61GP60059 68 aa8.1□□□□□ -1.11
SNCAIP-209ENST00000508017 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
SNCAIP-209ENST00000508017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
SNCAIP-209ENST00000508017 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
SNCAIP-209ENST00000508017 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
SNCAIP-209ENST00000508017 NDUFS5O43920 106 aa8.08□□□□□ -1.12
SNCAIP-209ENST00000508017 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
SNCAIP-209ENST00000508017 Q6ZR54 194 aa8.07□□□□□ -1.12
SNCAIP-209ENST00000508017 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
SNCAIP-209ENST00000508017 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
SNCAIP-209ENST00000508017 LCA10Q71F78 164 aa8.06□□□□□ -1.12
SNCAIP-209ENST00000508017 Q75L30 129 aa8.06□□□□□ -1.12
SNCAIP-209ENST00000508017 NBDYA0A0U1RRE5 68 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 A0A087X002 238 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 SPACA4Q8TDM5 124 aa8.05□□□□□ -1.12
SNCAIP-209ENST00000508017 A0A1B0GVX0 72 aa8.04□□□□□ -1.12
SNCAIP-209ENST00000508017 A6NED7 52 aa8.04□□□□□ -1.12
SNCAIP-209ENST00000508017 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
SNCAIP-209ENST00000508017 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
SNCAIP-209ENST00000508017 SPTSSBQ8NFR3 76 aa8.03□□□□□ -1.12
SNCAIP-209ENST00000508017 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
SNCAIP-209ENST00000508017 WWC2-AS2Q96NR7 200 aa8.02□□□□□ -1.13
SNCAIP-209ENST00000508017 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
SNCAIP-209ENST00000508017 HRES1P13985 223 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms