RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 TIMM8BQ9Y5J9 83 aaPredicted RBP0.57□□□□□ -2.32
LINC01088-204ENST00000507761 DEFB131AP59861 70 aa0.56□□□□□ -2.32
LINC01088-204ENST00000507761 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
LINC01088-204ENST00000507761 PTPRZ1P23471 2315 aaPredicted RBP0.56□□□□□ -2.32
LINC01088-204ENST00000507761 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
LINC01088-204ENST00000507761 ZNF462Q96JM2 2506 aa0.54□□□□□ -2.32
LINC01088-204ENST00000507761 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
LINC01088-204ENST00000507761 TFF3Q07654 80 aa0.53□□□□□ -2.32
LINC01088-204ENST00000507761 KLK9Q2XQG4 91 aa0.53□□□□□ -2.32
LINC01088-204ENST00000507761 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
LINC01088-204ENST00000507761 NOP10Q9NPE3 64 aaKnown RBP0.53□□□□□ -2.32
LINC01088-204ENST00000507761 S4R3F8 94 aa0.53□□□□□ -2.32
LINC01088-204ENST00000507761 REV3LO60673 3130 aa0.53□□□□□ -2.33
LINC01088-204ENST00000507761 C2CD3Q4AC94 2353 aa0.52□□□□□ -2.33
LINC01088-204ENST00000507761 TTC28Q96AY4 2481 aa0.52□□□□□ -2.33
LINC01088-204ENST00000507761 PRLHP81277 87 aa0.52□□□□□ -2.33
LINC01088-204ENST00000507761 POLQO75417 2590 aa0.51□□□□□ -2.33
LINC01088-204ENST00000507761 CACNA1HO95180 2353 aa0.51□□□□□ -2.33
LINC01088-204ENST00000507761 WFDC10BQ8IUB3 73 aa0.51□□□□□ -2.33
LINC01088-204ENST00000507761 SMR3AQ99954 134 aa0.51□□□□□ -2.33
LINC01088-204ENST00000507761 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
LINC01088-204ENST00000507761 USF3Q68DE3 2245 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 DEFB106AQ8N104 65 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 DOPEY2Q9Y3R5 2298 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
LINC01088-204ENST00000507761 WNK2Q9Y3S1 2297 aa0.49□□□□□ -2.33
LINC01088-204ENST00000507761 CELSR2Q9HCU4 2923 aa0.49□□□□□ -2.33
LINC01088-204ENST00000507761 A8MTW9 85 aa0.49□□□□□ -2.33
LINC01088-204ENST00000507761 SPINK1P00995 79 aa0.49□□□□□ -2.33
LINC01088-204ENST00000507761 KAAG1Q9UBP8 84 aa0.49□□□□□ -2.33
LINC01088-204ENST00000507761 TPRP12270 2363 aaKnown RBP0.49□□□□□ -2.33
LINC01088-204ENST00000507761 TRANK1O15050 2925 aa0.48□□□□□ -2.33
LINC01088-204ENST00000507761 H0YGG7 62 aa0.48□□□□□ -2.33
LINC01088-204ENST00000507761 POLR2KP53803 58 aaKnown RBP0.48□□□□□ -2.33
LINC01088-204ENST00000507761 ZNF292O60281 2723 aa0.48□□□□□ -2.33
LINC01088-204ENST00000507761 PLCE1Q9P212 2302 aa0.48□□□□□ -2.33
LINC01088-204ENST00000507761 M0R2T5 61 aa0.47□□□□□ -2.33
LINC01088-204ENST00000507761 DEFB135Q30KP9 77 aa0.47□□□□□ -2.33
LINC01088-204ENST00000507761 KRTAP19-3Q7Z4W3 81 aa0.47□□□□□ -2.33
LINC01088-204ENST00000507761 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
LINC01088-204ENST00000507761 A0A0C4DFX4 3053 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 ALMS1Q8TCU4 4167 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 M0QY20 66 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 KRTAP2-3P0C7H8 128 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 KRTAP2-4Q9BYR9 128 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 KRTAP2-1Q9BYU5 128 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 U3KQA8 63 aa0.46□□□□□ -2.34
LINC01088-204ENST00000507761 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
LINC01088-204ENST00000507761 DSPP15924 2871 aaKnown RBP0.45□□□□□ -2.34
LINC01088-204ENST00000507761 PRRC2CQ9Y520 2896 aaKnown RBP0.45□□□□□ -2.34
LINC01088-204ENST00000507761 C9orf92A6NGG3 77 aa0.45□□□□□ -2.34
LINC01088-204ENST00000507761 M0QZ58 72 aa0.45□□□□□ -2.34
LINC01088-204ENST00000507761 OTOGQ6ZRI0 2925 aa0.45□□□□□ -2.34
LINC01088-204ENST00000507761 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
LINC01088-204ENST00000507761 F8P00451 2351 aa0.45□□□□□ -2.34
LINC01088-204ENST00000507761 BDP1A6H8Y1 2624 aa0.44□□□□□ -2.34
LINC01088-204ENST00000507761 ABCA2Q9BZC7 2435 aa0.44□□□□□ -2.34
LINC01088-204ENST00000507761 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
LINC01088-204ENST00000507761 PCNX1Q96RV3 2341 aa0.44□□□□□ -2.34
LINC01088-204ENST00000507761 VWFP04275 2813 aa0.44□□□□□ -2.34
LINC01088-204ENST00000507761 GVINP1Q7Z2Y8 2422 aa0.43□□□□□ -2.34
LINC01088-204ENST00000507761 IGF2RP11717 2491 aa0.42□□□□□ -2.34
LINC01088-204ENST00000507761 RPL39P62891 51 aaKnown RBP0.42□□□□□ -2.34
LINC01088-204ENST00000507761 CLPSL2Q6UWE3 100 aa0.42□□□□□ -2.34
LINC01088-204ENST00000507761 AKAP13Q12802 2813 aa0.42□□□□□ -2.34
LINC01088-204ENST00000507761 KNL1Q8NG31 2342 aa0.41□□□□□ -2.34
LINC01088-204ENST00000507761 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.34
LINC01088-204ENST00000507761 PDE4DIPQ5VU43 2346 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 CSMD3Q7Z407 3707 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 ATRQ13535 2644 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 CHD6Q8TD26 2715 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 PRM1P04553 51 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 TNP1P09430 55 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 RPL39LQ96EH5 51 aaKnown RBP0.39□□□□□ -2.35
LINC01088-204ENST00000507761 ARHGAP5-AS1Q96IT6 56 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 AKAP6Q13023 2319 aa0.39□□□□□ -2.35
LINC01088-204ENST00000507761 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 USP24Q9UPU5 2620 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 SPRR2DP22532 72 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 APCP25054 2843 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 HECTD1Q9ULT8 2610 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 TNXBP22105 4242 aa0.38□□□□□ -2.35
LINC01088-204ENST00000507761 CREBBPQ92793 2442 aa0.37□□□□□ -2.35
LINC01088-204ENST00000507761 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
LINC01088-204ENST00000507761 SPRR2BP35325 72 aa0.37□□□□□ -2.35
LINC01088-204ENST00000507761 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
LINC01088-204ENST00000507761 CELSR1Q9NYQ6 3014 aa0.37□□□□□ -2.35
LINC01088-204ENST00000507761 CEP290O15078 2479 aa0.37□□□□□ -2.35
LINC01088-204ENST00000507761 SPTA1P02549 2419 aa0.36□□□□□ -2.35
LINC01088-204ENST00000507761 PTPN13Q12923 2485 aa0.36□□□□□ -2.35
LINC01088-204ENST00000507761 PRCDQ00LT1 54 aa0.36□□□□□ -2.35
LINC01088-204ENST00000507761 MUC5BQ9HC84 5762 aaPredicted RBP0.36□□□□□ -2.35
LINC01088-204ENST00000507761 TNRC18O15417 2968 aaPredicted RBP0.35□□□□□ -2.35
LINC01088-204ENST00000507761 LINC01590Q5TEZ4 76 aa0.35□□□□□ -2.35
LINC01088-204ENST00000507761 TOMM7Q9P0U1 55 aa0.35□□□□□ -2.35
LINC01088-204ENST00000507761 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
LINC01088-204ENST00000507761 PKD1L2Q7Z442 2459 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms