RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 H3BUT2 72 aa11.85□□□□□ -0.51
USP53-203ENST00000507597 TRACP01848 142 aa11.85□□□□□ -0.51
USP53-203ENST00000507597 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
USP53-203ENST00000507597 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
USP53-203ENST00000507597 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 LST1O00453 97 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 LINC01547P58512 204 aaPredicted RBP11.84□□□□□ -0.51
USP53-203ENST00000507597 ATXN8Q156A1 80 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 KRTAP13-2Q52LG2 175 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 Q8N377 158 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
USP53-203ENST00000507597 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
USP53-203ENST00000507597 Q8NBF4 154 aa11.83□□□□□ -0.52
USP53-203ENST00000507597 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
USP53-203ENST00000507597 TAX1BP3O14907 124 aa11.82□□□□□ -0.52
USP53-203ENST00000507597 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
USP53-203ENST00000507597 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
USP53-203ENST00000507597 MOBPQ13875 183 aa11.81□□□□□ -0.52
USP53-203ENST00000507597 NAA38Q9BRA0 125 aaKnown RBP11.81□□□□□ -0.52
USP53-203ENST00000507597 TMEM256-PLSCR3K7ERE1 68 aa11.8□□□□□ -0.52
USP53-203ENST00000507597 FABP2P12104 132 aa11.8□□□□□ -0.52
USP53-203ENST00000507597 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
USP53-203ENST00000507597 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
USP53-203ENST00000507597 A0A1W2PPM0 123 aa11.77□□□□□ -0.53
USP53-203ENST00000507597 SMIM29Q86T20 159 aa11.77□□□□□ -0.53
USP53-203ENST00000507597 HERC1Q15751 4861 aa11.76□□□□□ -0.53
USP53-203ENST00000507597 TCL1BO95988 128 aa11.75□□□□□ -0.53
USP53-203ENST00000507597 Q6JHZ5 121 aa11.74□□□□□ -0.53
USP53-203ENST00000507597 SPINK1P00995 79 aa11.72□□□□□ -0.53
USP53-203ENST00000507597 NDUFV3P56181 108 aaKnown RBP11.72□□□□□ -0.53
USP53-203ENST00000507597 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
USP53-203ENST00000507597 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
USP53-203ENST00000507597 IGLV8-61A0A075B6I0 122 aa11.69□□□□□ -0.54
USP53-203ENST00000507597 BAALC-AS2P0C853 105 aa11.69□□□□□ -0.54
USP53-203ENST00000507597 CD164Q04900 197 aa11.68□□□□□ -0.54
USP53-203ENST00000507597 H3BMG7 143 aa11.67□□□□□ -0.54
USP53-203ENST00000507597 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
USP53-203ENST00000507597 RPS29P62273 56 aaKnown RBP11.66□□□□□ -0.54
USP53-203ENST00000507597 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
USP53-203ENST00000507597 C9JAW5 83 aa11.63□□□□□ -0.55
USP53-203ENST00000507597 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
USP53-203ENST00000507597 TNXBP22105 4242 aa11.62□□□□□ -0.55
USP53-203ENST00000507597 GTF2H5Q6ZYL4 71 aa11.62□□□□□ -0.55
USP53-203ENST00000507597 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
USP53-203ENST00000507597 H3BT86 120 aa11.6□□□□□ -0.55
USP53-203ENST00000507597 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
USP53-203ENST00000507597 IGFL1Q6UW32 110 aa11.59□□□□□ -0.55
USP53-203ENST00000507597 HRCT1Q6UXD1 115 aa11.58□□□□□ -0.56
USP53-203ENST00000507597 DSCR8Q96T75 97 aa11.57□□□□□ -0.56
USP53-203ENST00000507597 K7EP34 96 aa11.56□□□□□ -0.56
USP53-203ENST00000507597 TEN1Q86WV5 123 aa11.55□□□□□ -0.56
USP53-203ENST00000507597 C21orf62-AS1Q17RA5 79 aa11.54□□□□□ -0.56
USP53-203ENST00000507597 Q6Q795 121 aa11.52□□□□□ -0.57
USP53-203ENST00000507597 PDE6GP18545 87 aa11.51□□□□□ -0.57
USP53-203ENST00000507597 Q5XG85 94 aa11.51□□□□□ -0.57
USP53-203ENST00000507597 TRBV7-7A0A0K0K1E9 115 aa11.5□□□□□ -0.57
USP53-203ENST00000507597 A0A1B0GV72 72 aa11.5□□□□□ -0.57
USP53-203ENST00000507597 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
USP53-203ENST00000507597 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
USP53-203ENST00000507597 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
USP53-203ENST00000507597 PRR4Q16378 134 aa11.47□□□□□ -0.57
USP53-203ENST00000507597 CCKP06307 115 aa11.46□□□□□ -0.57
USP53-203ENST00000507597 FP248Q71RG6 208 aaPredicted RBP11.46□□□□□ -0.57
USP53-203ENST00000507597 F8W1H4 67 aa11.44□□□□□ -0.58
USP53-203ENST00000507597 MTURNQ8N3F0 131 aa11.44□□□□□ -0.58
USP53-203ENST00000507597 A0A1B0GW54 56 aa11.42□□□□□ -0.58
USP53-203ENST00000507597 VPS25Q9BRG1 176 aa11.42□□□□□ -0.58
USP53-203ENST00000507597 LOC110117498A0A087WWA1 95 aa11.41□□□□□ -0.58
USP53-203ENST00000507597 A0A1W2PNM2 257 aa11.41□□□□□ -0.58
USP53-203ENST00000507597 ASB16-AS1Q495Z4 193 aa11.41□□□□□ -0.58
USP53-203ENST00000507597 OBSCN-AS1Q96MR7 158 aa11.41□□□□□ -0.58
USP53-203ENST00000507597 RETNLBQ9BQ08 111 aa11.4□□□□□ -0.58
USP53-203ENST00000507597 A0A087WSZ3 146 aa11.39□□□□□ -0.59
USP53-203ENST00000507597 C14orf132Q9NPU4 83 aa11.38□□□□□ -0.59
USP53-203ENST00000507597 IGLV7-46A0A075B6I9 117 aa11.37□□□□□ -0.59
USP53-203ENST00000507597 Q6ZQT0 140 aa11.37□□□□□ -0.59
USP53-203ENST00000507597 PRO0461Q9UI25 63 aa11.37□□□□□ -0.59
USP53-203ENST00000507597 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
USP53-203ENST00000507597 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
USP53-203ENST00000507597 A0A1B0GV90 55 aa11.27□□□□□ -0.61
USP53-203ENST00000507597 TPRXLQ17RH7 258 aa11.27□□□□□ -0.61
USP53-203ENST00000507597 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
USP53-203ENST00000507597 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
USP53-203ENST00000507597 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
USP53-203ENST00000507597 NREPQ16612 68 aa11.21□□□□□ -0.61
USP53-203ENST00000507597 J3KT08 172 aa11.2□□□□□ -0.62
USP53-203ENST00000507597 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
USP53-203ENST00000507597 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
USP53-203ENST00000507597 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
USP53-203ENST00000507597 SIGMAR1Q99720 223 aa11.16□□□□□ -0.62
USP53-203ENST00000507597 UBR4Q5T4S7 5183 aa11.16□□□□□ -0.62
USP53-203ENST00000507597 Q96NJ1 140 aa11.15□□□□□ -0.62
USP53-203ENST00000507597 NDUFB1O75438 58 aa11.12□□□□□ -0.63
USP53-203ENST00000507597 UBL5Q9BZL1 73 aa11.11□□□□□ -0.63
USP53-203ENST00000507597 DEFB116Q30KQ4 102 aa11.09□□□□□ -0.63
USP53-203ENST00000507597 C9orf92A6NGG3 77 aa11.08□□□□□ -0.64
USP53-203ENST00000507597 ACYP1P07311 99 aa11.07□□□□□ -0.64
USP53-203ENST00000507597 C8orf87E5RJ46 101 aa11.03□□□□□ -0.64
USP53-203ENST00000507597 BPY2O14599 106 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 458.1 ms