RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 S4R3F8 94 aa-0.9□□□□□ -2.55
LSM6-205ENST00000507449 RANBP2P49792 3224 aaKnown RBP-0.9□□□□□ -2.55
LSM6-205ENST00000507449 WDFY3Q8IZQ1 3526 aa-0.9□□□□□ -2.55
LSM6-205ENST00000507449 TEX14Q8IWB6 1497 aa-0.91□□□□□ -2.55
LSM6-205ENST00000507449 DNAH14Q0VDD8 3507 aa-0.91□□□□□ -2.55
LSM6-205ENST00000507449 DEFB4AO15263 64 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 IGLC2P0DOY2 106 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 IGLC3P0DOY3 106 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 DEFB110Q30KQ9 67 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 KRTAP19-5Q3LI72 72 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 CDKN2A-AS1Q9UH64 79 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 VCANP13611 3396 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 ABCC2Q92887 1545 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 CNTLNQ9NXG0 1405 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 ANKRD50Q9ULJ7 1429 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 ANKRD36A6QL64 1941 aa-0.91□□□□□ -2.56
LSM6-205ENST00000507449 MON2Q7Z3U7 1717 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 F8WEM9 126 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 ETDBQ3ZM63 59 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 COL5A1-AS1Q5SY13 56 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 WFDC9Q8NEX5 89 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 MUC3AQ02505 3323 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 C5P01031 1676 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 TROQ12816 1431 aaPredicted RBP-0.92□□□□□ -2.56
LSM6-205ENST00000507449 USP34Q70CQ2 3546 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 FYCO1Q9BQS8 1478 aa-0.92□□□□□ -2.56
LSM6-205ENST00000507449 HMGN3Q15651 99 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 NCMAPQ5T1S8 102 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 WFDC13Q8IUB5 93 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 ACBD7Q8N6N7 88 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 DPY30Q9C005 99 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 HIGD1BQ9P298 99 aa-0.93□□□□□ -2.56
LSM6-205ENST00000507449 CLIP1P30622 1438 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 C9orf92A6NGG3 77 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 D6R8Y8 96 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 LEPROTL1O95214 131 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 LINC00032P0C843 101 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 FAUP35544 74 aaKnown RBP-0.94□□□□□ -2.56
LSM6-205ENST00000507449 RPS29P62273 56 aaKnown RBP-0.94□□□□□ -2.56
LSM6-205ENST00000507449 MUSTN1Q8IVN3 82 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 FRYLO94915 3013 aa-0.94□□□□□ -2.56
LSM6-205ENST00000507449 VPS13CQ709C8 3753 aa-0.95□□□□□ -2.56
LSM6-205ENST00000507449 MKI67P46013 3256 aaKnown RBP-0.95□□□□□ -2.56
LSM6-205ENST00000507449 PEG3Q9GZU2 1588 aa-0.95□□□□□ -2.56
LSM6-205ENST00000507449 PTPN23Q9H3S7 1636 aa-0.95□□□□□ -2.56
LSM6-205ENST00000507449 ADAMTS12P58397 1594 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 CEP250Q9BV73 2442 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 UQCRHLA0A096LP55 91 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 CLPSL2Q6UWE3 100 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 ALKAL2Q6UX46 152 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 ZNF720Q7Z2F6 126 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 SZT2Q5T011 3432 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 UNC80Q8N2C7 3258 aa-0.96□□□□□ -2.56
LSM6-205ENST00000507449 CFAP47Q6ZTR5 3102 aa-0.97□□□□□ -2.56
LSM6-205ENST00000507449 UBE2D4Q9Y2X8 147 aa-0.98□□□□□ -2.57
LSM6-205ENST00000507449 PCNTO95613 3336 aa-0.99□□□□□ -2.57
LSM6-205ENST00000507449 MAGI2Q86UL8 1455 aa-0.99□□□□□ -2.57
LSM6-205ENST00000507449 ASXL1Q8IXJ9 1541 aa-0.99□□□□□ -2.57
LSM6-205ENST00000507449 NMSQ5H8A3 153 aa-1□□□□□ -2.57
LSM6-205ENST00000507449 CICQ96RK0 1608 aaPredicted RBP-1□□□□□ -2.57
LSM6-205ENST00000507449 M0R143 59 aa-1.01□□□□□ -2.57
LSM6-205ENST00000507449 EPRSP07814 1512 aaKnown RBP-1.01□□□□□ -2.57
LSM6-205ENST00000507449 CRYBG1Q9Y4K1 1723 aa-1.01□□□□□ -2.57
LSM6-205ENST00000507449 LCE6AA0A183 80 aa-1.02□□□□□ -2.57
LSM6-205ENST00000507449 ABCC10Q5T3U5 1492 aa-1.02□□□□□ -2.57
LSM6-205ENST00000507449 BCORQ6W2J9 1755 aa-1.03□□□□□ -2.57
LSM6-205ENST00000507449 CLTCQ00610 1675 aaKnown RBP-1.03□□□□□ -2.57
LSM6-205ENST00000507449 COX7BP24311 80 aa-1.03□□□□□ -2.57
LSM6-205ENST00000507449 PRLHP81277 87 aa-1.03□□□□□ -2.57
LSM6-205ENST00000507449 DNAH12Q6ZR08 3092 aa-1.03□□□□□ -2.57
LSM6-205ENST00000507449 ASPMQ8IZT6 3477 aa-1.03□□□□□ -2.58
LSM6-205ENST00000507449 CENPFP49454 3210 aa-1.04□□□□□ -2.58
LSM6-205ENST00000507449 FANCAO15360 1455 aa-1.04□□□□□ -2.58
LSM6-205ENST00000507449 COX6B2Q6YFQ2 88 aa-1.04□□□□□ -2.58
LSM6-205ENST00000507449 CDC42BPAQ5VT25 1732 aa-1.04□□□□□ -2.58
LSM6-205ENST00000507449 C20orf78Q9BR46 151 aa-1.05□□□□□ -2.58
LSM6-205ENST00000507449 SNHG12Q9BXW3 62 aa-1.05□□□□□ -2.58
LSM6-205ENST00000507449 MAP3K1Q13233 1512 aa-1.05□□□□□ -2.58
LSM6-205ENST00000507449 ATP10BO94823 1461 aa-1.05□□□□□ -2.58
LSM6-205ENST00000507449 KIF20BQ96Q89 1820 aa-1.05□□□□□ -2.58
LSM6-205ENST00000507449 NDUFA3O95167 84 aa-1.07□□□□□ -2.58
LSM6-205ENST00000507449 HMGN2P05204 90 aaKnown RBP-1.07□□□□□ -2.58
LSM6-205ENST00000507449 RGPD2P0DJD1 1756 aa-1.07□□□□□ -2.58
LSM6-205ENST00000507449 QSER1Q2KHR3 1735 aa-1.07□□□□□ -2.58
LSM6-205ENST00000507449 VPS8Q8N3P4 1428 aa-1.07□□□□□ -2.58
LSM6-205ENST00000507449 BRCA2P51587 3418 aa-1.08□□□□□ -2.58
LSM6-205ENST00000507449 TNP1P09430 55 aa-1.08□□□□□ -2.58
LSM6-205ENST00000507449 RPL38P63173 70 aaKnown RBP-1.08□□□□□ -2.58
LSM6-205ENST00000507449 DEFB136Q30KP8 78 aa-1.08□□□□□ -2.58
LSM6-205ENST00000507449 TTTY10Q9BZA0 68 aa-1.08□□□□□ -2.58
LSM6-205ENST00000507449 PREX1Q8TCU6 1659 aa-1.08□□□□□ -2.58
LSM6-205ENST00000507449 LRRC7Q96NW7 1537 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 LINC01546A6NGU7 62 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 A8MTW9 85 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 ALKQ9UM73 1620 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 CDH23Q9H251 3354 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 PKD1L3Q7Z443 1732 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 TIAM2Q8IVF5 1701 aa-1.09□□□□□ -2.58
LSM6-205ENST00000507449 NEXMIFQ5QGS0 1516 aa-1.1□□□□□ -2.58
LSM6-205ENST00000507449 ATP7BP35670 1465 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms