RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
POLR2J3-212ENST00000507355 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
POLR2J3-212ENST00000507355 IFITM1P13164 125 aa7.13□□□□□ -1.27
POLR2J3-212ENST00000507355 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
POLR2J3-212ENST00000507355 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
POLR2J3-212ENST00000507355 KRTDAPP60985 99 aa7.12□□□□□ -1.27
POLR2J3-212ENST00000507355 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
POLR2J3-212ENST00000507355 A4D1N5 150 aa7.11□□□□□ -1.27
POLR2J3-212ENST00000507355 Q6ZVH6 145 aa7.11□□□□□ -1.27
POLR2J3-212ENST00000507355 TCL1BO95988 128 aa7.1□□□□□ -1.27
POLR2J3-212ENST00000507355 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
POLR2J3-212ENST00000507355 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
POLR2J3-212ENST00000507355 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
POLR2J3-212ENST00000507355 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
POLR2J3-212ENST00000507355 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
POLR2J3-212ENST00000507355 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
POLR2J3-212ENST00000507355 USH2AO75445 5202 aa7.07□□□□□ -1.28
POLR2J3-212ENST00000507355 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
POLR2J3-212ENST00000507355 C20orf202A1L168 122 aa7.06□□□□□ -1.28
POLR2J3-212ENST00000507355 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
POLR2J3-212ENST00000507355 F8WEM9 126 aa7.05□□□□□ -1.28
POLR2J3-212ENST00000507355 VAMP3Q15836 100 aa7.04□□□□□ -1.28
POLR2J3-212ENST00000507355 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
POLR2J3-212ENST00000507355 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
POLR2J3-212ENST00000507355 Q6JHZ5 121 aa7.01□□□□□ -1.29
POLR2J3-212ENST00000507355 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
POLR2J3-212ENST00000507355 Q6Q795 121 aa7□□□□□ -1.29
POLR2J3-212ENST00000507355 IGFL1Q6UW32 110 aa7□□□□□ -1.29
POLR2J3-212ENST00000507355 Q6ZQY7 126 aa7□□□□□ -1.29
POLR2J3-212ENST00000507355 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
POLR2J3-212ENST00000507355 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
POLR2J3-212ENST00000507355 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
POLR2J3-212ENST00000507355 ATP11AUNQ6ZP68 121 aa6.98□□□□□ -1.29
POLR2J3-212ENST00000507355 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
POLR2J3-212ENST00000507355 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
POLR2J3-212ENST00000507355 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
POLR2J3-212ENST00000507355 Q75L30 129 aa6.96□□□□□ -1.3
POLR2J3-212ENST00000507355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
POLR2J3-212ENST00000507355 LST1O00453 97 aa6.93□□□□□ -1.3
POLR2J3-212ENST00000507355 CFC1P0CG37 223 aa6.93□□□□□ -1.3
POLR2J3-212ENST00000507355 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
POLR2J3-212ENST00000507355 Q96NJ1 140 aa6.92□□□□□ -1.3
POLR2J3-212ENST00000507355 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
POLR2J3-212ENST00000507355 H3BUT2 72 aa6.91□□□□□ -1.3
POLR2J3-212ENST00000507355 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
POLR2J3-212ENST00000507355 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
POLR2J3-212ENST00000507355 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
POLR2J3-212ENST00000507355 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
POLR2J3-212ENST00000507355 C12orf57Q99622 126 aa6.9□□□□□ -1.3
POLR2J3-212ENST00000507355 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
POLR2J3-212ENST00000507355 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
POLR2J3-212ENST00000507355 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
POLR2J3-212ENST00000507355 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
POLR2J3-212ENST00000507355 S100A2P29034 98 aa6.87□□□□□ -1.31
POLR2J3-212ENST00000507355 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
POLR2J3-212ENST00000507355 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
POLR2J3-212ENST00000507355 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
POLR2J3-212ENST00000507355 A8MUU9 505 aa6.84□□□□□ -1.31
POLR2J3-212ENST00000507355 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
POLR2J3-212ENST00000507355 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
POLR2J3-212ENST00000507355 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
POLR2J3-212ENST00000507355 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
POLR2J3-212ENST00000507355 A0A087WSZ3 146 aa6.81□□□□□ -1.32
POLR2J3-212ENST00000507355 H3BS24 57 aa6.81□□□□□ -1.32
POLR2J3-212ENST00000507355 SNCGO76070 127 aa6.81□□□□□ -1.32
POLR2J3-212ENST00000507355 H0YGX0 51 aa6.8□□□□□ -1.32
POLR2J3-212ENST00000507355 COX8AP10176 69 aa6.8□□□□□ -1.32
POLR2J3-212ENST00000507355 DSCR10P59022 87 aa6.79□□□□□ -1.32
POLR2J3-212ENST00000507355 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
POLR2J3-212ENST00000507355 FAM218AQ96MZ4 157 aa6.79□□□□□ -1.32
POLR2J3-212ENST00000507355 H3BMG7 143 aa6.78□□□□□ -1.32
POLR2J3-212ENST00000507355 MT2AP02795 61 aa6.78□□□□□ -1.32
POLR2J3-212ENST00000507355 DLEU1O43261 78 aa6.77□□□□□ -1.33
POLR2J3-212ENST00000507355 S100A6P06703 90 aa6.77□□□□□ -1.33
POLR2J3-212ENST00000507355 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
POLR2J3-212ENST00000507355 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
POLR2J3-212ENST00000507355 FABP2P12104 132 aa6.75□□□□□ -1.33
POLR2J3-212ENST00000507355 C14orf144Q96I85 54 aa6.75□□□□□ -1.33
POLR2J3-212ENST00000507355 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
POLR2J3-212ENST00000507355 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
POLR2J3-212ENST00000507355 LINC00313P59037 77 aa6.74□□□□□ -1.33
POLR2J3-212ENST00000507355 MT1FP04733 61 aa6.73□□□□□ -1.33
POLR2J3-212ENST00000507355 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
POLR2J3-212ENST00000507355 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
POLR2J3-212ENST00000507355 A0A1B0GX51 115 aa6.72□□□□□ -1.33
POLR2J3-212ENST00000507355 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
POLR2J3-212ENST00000507355 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
POLR2J3-212ENST00000507355 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
POLR2J3-212ENST00000507355 S100A1P23297 94 aa6.7□□□□□ -1.34
POLR2J3-212ENST00000507355 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
POLR2J3-212ENST00000507355 C2orf91Q6ZV80 131 aa6.69□□□□□ -1.34
POLR2J3-212ENST00000507355 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
POLR2J3-212ENST00000507355 PRO1854Q9UHT4 67 aa6.69□□□□□ -1.34
POLR2J3-212ENST00000507355 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 SPATA45Q537H7 98 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 CEND1Q8N111 149 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
POLR2J3-212ENST00000507355 PAM16Q9Y3D7 125 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms