RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
NEDD4-205ENST00000506154 CDKN2A-AS1Q9UH64 79 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 H3BQ85 93 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 J3QKU1 62 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 KRTAP13-3Q3SY46 172 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 RNASE13Q5GAN3 156 aaKnown RBP1.38□□□□□ -2.19
NEDD4-205ENST00000506154 C10orf55Q5SWW7 151 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 C7orf33Q8WU49 177 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.38□□□□□ -2.196e-7■■■□□ 15.2
NEDD4-205ENST00000506154 ST20-AS1Q8NBB2 130 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 FN1P02751 2386 aaKnown RBP1.38□□□□□ -2.19
NEDD4-205ENST00000506154 KNTC1P50748 2209 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-21A0A0B4J1V1 117 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 LECT2O14960 151 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 Q8N9L7 120 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 TENM2Q9NT68 2774 aa1.38□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-64DA0A0J9YX35 117 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-23P01764 117 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 COX6A2Q02221 97 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 LINC00472Q9H8W2 130 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 SEC16AO15027 2179 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 MUC4Q99102 2169 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 H7C2G1 150 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 KRTAP19-1Q8IUB9 90 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 TRGV2A0A075B6R0 118 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 LYNX1G3V0Z9 82 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 IGLV6-57P01721 117 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 LYNX1P0DP58 116 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 CASC10Q5T4H9 136 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 TIMM8BQ9Y5J9 83 aaPredicted RBP1.37□□□□□ -2.19
NEDD4-205ENST00000506154 A0A1B0GVX0 72 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 SPTSSBQ8NFR3 76 aa1.37□□□□□ -2.19
NEDD4-205ENST00000506154 IGKV2D-24A0A075B6R9 120 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 DNAH10OSP0CZ25 163 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 COX7BP24311 80 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 LINC00208Q96KT6 92 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 AHCTF1Q8WYP5 2266 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 NDUFB1O75438 58 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 ERHP84090 104 aaKnown RBP1.36□□□□□ -2.19
NEDD4-205ENST00000506154 PTPRZ1P23471 2315 aaPredicted RBP1.36□□□□□ -2.19
NEDD4-205ENST00000506154 PANO1I0J062 215 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 COX7B2Q8TF08 81 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 C4orf3Q8WVX3 66 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 FLGP20930 4061 aaPredicted RBP1.36□□□□□ -2.19
NEDD4-205ENST00000506154 ABCA4P78363 2273 aa1.36□□□□□ -2.19
NEDD4-205ENST00000506154 KRTAP25-1Q3LHN0 102 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 PLCE1Q9P212 2302 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 CASC2Q6XLA1 102 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 MYO9AB2RTY4 2548 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 DEFB112Q30KQ8 113 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 HIGD2BQ4VC39 106 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-11P01762 117 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 C10orf99Q6UWK7 81 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 TGP01266 2768 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 CADP27708 2225 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-72A0A0B4J1Y9 119 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 A8MUU9 505 aa1.35□□□□□ -2.19
NEDD4-205ENST00000506154 CACNA1DQ01668 2161 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 IGHV3-64A0A075B6Q5 118 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 NDUFA4O00483 81 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 KRTAP10-11P60412 298 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 CNEP1R1Q8N9A8 125 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 COA5Q86WW8 74 aa1.34□□□□□ -2.19
NEDD4-205ENST00000506154 A0A087WTM6 91 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 C1orf137Q5JT78 98 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 C1orf134Q5TEV5 83 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 RETNLBQ9BQ08 111 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 FAM208BQ5VWN6 2430 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 MALRD1Q5VYJ5 2156 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 DEFB131BA0A096LNP1 70 aa1.34□□□□□ -2.2
NEDD4-205ENST00000506154 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.2
NEDD4-205ENST00000506154 RIF1Q5UIP0 2472 aaKnown RBP1.33□□□□□ -2.2
NEDD4-205ENST00000506154 Q5W150 140 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 Q6ZQY7 126 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 CREBBPQ92793 2442 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 FAT4Q6V0I7 4981 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 CRPP02741 224 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 HRES1P13985 223 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 LYZP61626 148 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 CSAG1Q6PB30 78 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 LEAP2Q969E1 77 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 SPTBN2O15020 2390 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 A0A1B0GUV1 79 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.33□□□□□ -2.2
NEDD4-205ENST00000506154 C15orf56Q8N910 161 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 SORL1Q92673 2214 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 DNAJC13O75165 2243 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 KLK12Q9UKR0 248 aa1.33□□□□□ -2.2
NEDD4-205ENST00000506154 FASNP49327 2511 aaKnown RBP1.33□□□□□ -2.2
NEDD4-205ENST00000506154 A0A1B0GVY2 172 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 LRCOL1A6NCL2 159 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 C20orf166-AS1Q96NR2 134 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 CCL19Q99731 98 aa1.32□□□□□ -2.2
NEDD4-205ENST00000506154 GVQW2A0A096LPI5 108 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms