RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SMIM29Q86T20 159 aa4.36□□□□□ -1.71
SNF8-204ENST00000506104 F8WEM9 126 aa4.35□□□□□ -1.71
SNF8-204ENST00000506104 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
SNF8-204ENST00000506104 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
SNF8-204ENST00000506104 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
SNF8-204ENST00000506104 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.71
SNF8-204ENST00000506104 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
SNF8-204ENST00000506104 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
SNF8-204ENST00000506104 A0A1B0GWB2 263 aa4.33□□□□□ -1.72
SNF8-204ENST00000506104 OBSCN-AS1Q96MR7 158 aa4.33□□□□□ -1.72
SNF8-204ENST00000506104 YPEL4Q96NS1 127 aa4.33□□□□□ -1.72
SNF8-204ENST00000506104 LITAFQ99732 161 aa4.33□□□□□ -1.72
SNF8-204ENST00000506104 TIMM17BO60830 172 aa4.32□□□□□ -1.72
SNF8-204ENST00000506104 SLC7A5P1Q8MH63 180 aa4.32□□□□□ -1.72
SNF8-204ENST00000506104 Q5XG85 94 aa4.31□□□□□ -1.72
SNF8-204ENST00000506104 SYS1-DBNDD2H3BUS1 97 aa4.3□□□□□ -1.72
SNF8-204ENST00000506104 NHP2Q9NX24 153 aaKnown RBP4.3□□□□□ -1.72
SNF8-204ENST00000506104 IGLV5-48A0A075B6I7 105 aa4.29□□□□□ -1.72
SNF8-204ENST00000506104 TRBV7-6A0A0J9YX20 115 aa4.29□□□□□ -1.72
SNF8-204ENST00000506104 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
SNF8-204ENST00000506104 Q96NJ1 140 aa4.29□□□□□ -1.72
SNF8-204ENST00000506104 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
SNF8-204ENST00000506104 C20orf202A1L168 122 aa4.28□□□□□ -1.72
SNF8-204ENST00000506104 CFC1P0CG37 223 aa4.28□□□□□ -1.72
SNF8-204ENST00000506104 VAMP3Q15836 100 aa4.28□□□□□ -1.72
SNF8-204ENST00000506104 MUSTN1Q8IVN3 82 aa4.28□□□□□ -1.72
SNF8-204ENST00000506104 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
SNF8-204ENST00000506104 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
SNF8-204ENST00000506104 KRTDAPP60985 99 aa4.27□□□□□ -1.73
SNF8-204ENST00000506104 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
SNF8-204ENST00000506104 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
SNF8-204ENST00000506104 SEC61GP60059 68 aa4.26□□□□□ -1.73
SNF8-204ENST00000506104 Q6ZVQ6 151 aa4.26□□□□□ -1.73
SNF8-204ENST00000506104 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 LST1O00453 97 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 IFITM1P13164 125 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 LINC01545Q5VT33 79 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 Q6JHZ5 121 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 IGFL1Q6UW32 110 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 Q6ZQY7 126 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 ATOH7Q8N100 152 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
SNF8-204ENST00000506104 hADV29S1A0JD25 119 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 H3BUT2 72 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 OCIAD2Q56VL3 154 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SNF8-204ENST00000506104 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
SNF8-204ENST00000506104 COLCA2A8K830 154 aa4.22□□□□□ -1.73
SNF8-204ENST00000506104 LINC00575Q6W349 94 aa4.22□□□□□ -1.73
SNF8-204ENST00000506104 HIST1H2BKO60814 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BJP06899 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
SNF8-204ENST00000506104 Q6ZVH6 145 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
SNF8-204ENST00000506104 DSCR10P59022 87 aa4.2□□□□□ -1.74
SNF8-204ENST00000506104 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
SNF8-204ENST00000506104 C12orf57Q99622 126 aa4.19□□□□□ -1.74
SNF8-204ENST00000506104 SIGMAR1Q99720 223 aa4.18□□□□□ -1.74
SNF8-204ENST00000506104 SS18L2Q9UHA2 77 aa4.18□□□□□ -1.74
SNF8-204ENST00000506104 USH2AO75445 5202 aa4.18□□□□□ -1.74
SNF8-204ENST00000506104 MT2AP02795 61 aa4.17□□□□□ -1.74
SNF8-204ENST00000506104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.17□□□□□ -1.74
SNF8-204ENST00000506104 RBM12B-AS1Q9P1G2 102 aa4.17□□□□□ -1.74
SNF8-204ENST00000506104 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SNF8-204ENST00000506104 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
SNF8-204ENST00000506104 C20orf166-AS1Q96NR2 134 aa4.16□□□□□ -1.74
SNF8-204ENST00000506104 A0A087WSZ3 146 aa4.15□□□□□ -1.75
SNF8-204ENST00000506104 A8MUU9 505 aa4.15□□□□□ -1.75
SNF8-204ENST00000506104 HSBP1L1C9JCN9 74 aa4.14□□□□□ -1.75
SNF8-204ENST00000506104 SNCGO76070 127 aa4.14□□□□□ -1.75
SNF8-204ENST00000506104 MT1FP04733 61 aa4.14□□□□□ -1.75
SNF8-204ENST00000506104 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
SNF8-204ENST00000506104 A0A1B0GV72 72 aa4.13□□□□□ -1.75
SNF8-204ENST00000506104 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
SNF8-204ENST00000506104 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
SNF8-204ENST00000506104 LINC00846Q9NV44 126 aa4.13□□□□□ -1.75
SNF8-204ENST00000506104 FABP2P12104 132 aa4.12□□□□□ -1.75
SNF8-204ENST00000506104 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
SNF8-204ENST00000506104 LINC00313P59037 77 aa4.12□□□□□ -1.75
SNF8-204ENST00000506104 PPDPFLQ8WWR9 84 aa4.12□□□□□ -1.75
SNF8-204ENST00000506104 HIST1H4GQ99525 98 aa4.12□□□□□ -1.75
SNF8-204ENST00000506104 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
SNF8-204ENST00000506104 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
SNF8-204ENST00000506104 H3BMG7 143 aa4.1□□□□□ -1.75
SNF8-204ENST00000506104 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
SNF8-204ENST00000506104 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
SNF8-204ENST00000506104 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
SNF8-204ENST00000506104 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
SNF8-204ENST00000506104 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
SNF8-204ENST00000506104 S100A2P29034 98 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms