RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 M0R2T5 61 aa13.11□□□□□ -0.31
HERC4-212ENST00000505760 Q6ZQY7 126 aa13.11□□□□□ -0.31
HERC4-212ENST00000505760 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
HERC4-212ENST00000505760 Q6JHZ5 121 aa13.09□□□□□ -0.31
HERC4-212ENST00000505760 LORP23490 312 aaPredicted RBP13.08□□□□□ -0.32
HERC4-212ENST00000505760 KRTAP10-6P60371 365 aaPredicted RBP13.08□□□□□ -0.32
HERC4-212ENST00000505760 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
HERC4-212ENST00000505760 HSBP1L1C9JCN9 74 aa13.06□□□□□ -0.32
HERC4-212ENST00000505760 FLGP20930 4061 aaPredicted RBP13.04□□□□□ -0.32
HERC4-212ENST00000505760 TRBV7-7A0A0K0K1E9 115 aa13.04□□□□□ -0.32
HERC4-212ENST00000505760 IGFL1Q6UW32 110 aa13.04□□□□□ -0.32
HERC4-212ENST00000505760 OCIAD2Q56VL3 154 aa13.02□□□□□ -0.33
HERC4-212ENST00000505760 S100A2P29034 98 aa13.01□□□□□ -0.33
HERC4-212ENST00000505760 HIST1H2BLQ99880 126 aa13□□□□□ -0.33
HERC4-212ENST00000505760 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.99□□□□□ -0.33
HERC4-212ENST00000505760 HIST3H2BBQ8N257 126 aa12.99□□□□□ -0.33
HERC4-212ENST00000505760 KRTAP3-3Q9BYR6 98 aa12.99□□□□□ -0.33
HERC4-212ENST00000505760 KRTAP3-2Q9BYR7 98 aa12.99□□□□□ -0.33
HERC4-212ENST00000505760 OBSCN-AS1Q96MR7 158 aa12.97□□□□□ -0.33
HERC4-212ENST00000505760 C12orf57Q99622 126 aa12.97□□□□□ -0.33
HERC4-212ENST00000505760 BVES-AS1Q5T3Y7 98 aa12.96□□□□□ -0.33
HERC4-212ENST00000505760 SNHG12Q9BXW3 62 aa12.96□□□□□ -0.33
HERC4-212ENST00000505760 ATP11AUNQ6ZP68 121 aa12.95□□□□□ -0.34
HERC4-212ENST00000505760 PPDPFLQ8WWR9 84 aa12.95□□□□□ -0.34
HERC4-212ENST00000505760 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
HERC4-212ENST00000505760 Q75L30 129 aa12.92□□□□□ -0.34
HERC4-212ENST00000505760 LST1O00453 97 aa12.91□□□□□ -0.34
HERC4-212ENST00000505760 H3BUT2 72 aa12.9□□□□□ -0.34
HERC4-212ENST00000505760 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
HERC4-212ENST00000505760 Q6Q795 121 aa12.89□□□□□ -0.35
HERC4-212ENST00000505760 S100A6P06703 90 aa12.86□□□□□ -0.35
HERC4-212ENST00000505760 Q96NJ1 140 aa12.84□□□□□ -0.35
HERC4-212ENST00000505760 SS18L2Q9UHA2 77 aa12.83□□□□□ -0.36
HERC4-212ENST00000505760 SNCGO76070 127 aa12.82□□□□□ -0.36
HERC4-212ENST00000505760 COX8AP10176 69 aa12.82□□□□□ -0.36
HERC4-212ENST00000505760 RAB37Q96AX2 223 aa12.79□□□□□ -0.36
HERC4-212ENST00000505760 CFC1P0CG37 223 aa12.77□□□□□ -0.37
HERC4-212ENST00000505760 TEN1Q86WV5 123 aa12.77□□□□□ -0.37
HERC4-212ENST00000505760 H0YGX0 51 aa12.75□□□□□ -0.37
HERC4-212ENST00000505760 DLEU1O43261 78 aa12.75□□□□□ -0.37
HERC4-212ENST00000505760 NDUFV3P56181 108 aaKnown RBP12.75□□□□□ -0.37
HERC4-212ENST00000505760 FAM218AQ96MZ4 157 aa12.72□□□□□ -0.37
HERC4-212ENST00000505760 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
HERC4-212ENST00000505760 A0A087WSZ3 146 aa12.71□□□□□ -0.37
HERC4-212ENST00000505760 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
HERC4-212ENST00000505760 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
HERC4-212ENST00000505760 A8MUU9 505 aa12.69□□□□□ -0.38
HERC4-212ENST00000505760 H3BMG7 143 aa12.68□□□□□ -0.38
HERC4-212ENST00000505760 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
HERC4-212ENST00000505760 GHRHP01286 108 aa12.66□□□□□ -0.38
HERC4-212ENST00000505760 TRBV20-1A0A075B6N2 111 aa12.65□□□□□ -0.38
HERC4-212ENST00000505760 FABP2P12104 132 aa12.65□□□□□ -0.38
HERC4-212ENST00000505760 S100A1P23297 94 aa12.64□□□□□ -0.39
HERC4-212ENST00000505760 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
HERC4-212ENST00000505760 DSCR10P59022 87 aa12.62□□□□□ -0.39
HERC4-212ENST00000505760 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
HERC4-212ENST00000505760 A0A1B0GX51 115 aa12.61□□□□□ -0.39
HERC4-212ENST00000505760 SIGMAR1Q99720 223 aa12.6□□□□□ -0.39
HERC4-212ENST00000505760 C2orf91Q6ZV80 131 aa12.59□□□□□ -0.39
HERC4-212ENST00000505760 PRO1854Q9UHT4 67 aa12.59□□□□□ -0.39
HERC4-212ENST00000505760 CEND1Q8N111 149 aa12.58□□□□□ -0.4
HERC4-212ENST00000505760 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
HERC4-212ENST00000505760 A6NJY4 79 aa12.57□□□□□ -0.4
HERC4-212ENST00000505760 A0A1W2PNM2 257 aa12.56□□□□□ -0.4
HERC4-212ENST00000505760 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
HERC4-212ENST00000505760 LINC00313P59037 77 aa12.52□□□□□ -0.41
HERC4-212ENST00000505760 KRTAP9-8Q9BYQ0 159 aa12.52□□□□□ -0.41
HERC4-212ENST00000505760 TRIAP1O43715 76 aa12.51□□□□□ -0.41
HERC4-212ENST00000505760 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
HERC4-212ENST00000505760 ANKRD29Q8N6D5 301 aa12.5□□□□□ -0.41
HERC4-212ENST00000505760 DNAL4O96015 105 aa12.49□□□□□ -0.41
HERC4-212ENST00000505760 FXYD2P54710 66 aa12.49□□□□□ -0.41
HERC4-212ENST00000505760 A0A1B0GV72 72 aa12.48□□□□□ -0.41
HERC4-212ENST00000505760 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
HERC4-212ENST00000505760 FAM236DA0A1B0GTK5 79 aa12.47□□□□□ -0.41
HERC4-212ENST00000505760 FAM236CP0DP71 79 aa12.47□□□□□ -0.41
HERC4-212ENST00000505760 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
HERC4-212ENST00000505760 USH2AO75445 5202 aa12.45□□□□□ -0.42
HERC4-212ENST00000505760 KRTAP16-1A8MUX0 517 aa12.45□□□□□ -0.42
HERC4-212ENST00000505760 H3BQ85 93 aa12.43□□□□□ -0.42
HERC4-212ENST00000505760 PSMB2P49721 201 aa12.42□□□□□ -0.42
HERC4-212ENST00000505760 DEFB116Q30KQ4 102 aa12.41□□□□□ -0.42
HERC4-212ENST00000505760 TMEM256-PLSCR3K7ERE1 68 aa12.39□□□□□ -0.43
HERC4-212ENST00000505760 NOTCH2NLQ7Z3S9 236 aa12.39□□□□□ -0.43
HERC4-212ENST00000505760 RBM12B-AS1Q9P1G2 102 aa12.39□□□□□ -0.43
HERC4-212ENST00000505760 TRACP01848 142 aa12.38□□□□□ -0.43
HERC4-212ENST00000505760 CCKP06307 115 aa12.38□□□□□ -0.43
HERC4-212ENST00000505760 IGHV6-1A0A0B4J1U7 121 aa12.37□□□□□ -0.43
HERC4-212ENST00000505760 LINC00472Q9H8W2 130 aa12.37□□□□□ -0.43
HERC4-212ENST00000505760 SSPOA2VEC9 5147 aa12.37□□□□□ -0.43
HERC4-212ENST00000505760 COX6CP09669 75 aa12.36□□□□□ -0.43
HERC4-212ENST00000505760 K7ERJ3 54 aa12.35□□□□□ -0.43
HERC4-212ENST00000505760 HRES1P13985 223 aa12.33□□□□□ -0.44
HERC4-212ENST00000505760 HSD52Q0P140 79 aa12.33□□□□□ -0.44
HERC4-212ENST00000505760 MT2AP02795 61 aa12.32□□□□□ -0.44
HERC4-212ENST00000505760 MPLKIPQ8TAP9 179 aa12.32□□□□□ -0.44
HERC4-212ENST00000505760 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.3□□□□□ -0.44
HERC4-212ENST00000505760 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
HERC4-212ENST00000505760 VPS25Q9BRG1 176 aa12.28□□□□□ -0.44
HERC4-212ENST00000505760 A0A1B0GVX0 72 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms